Jatropha Genome Database

JcCB0395701.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0395701.10 + phase: 0 /pseudo/partial
         (85 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SSI8_RICCO (tr|B9SSI8) Lipid-A-disaccharide synthase, putative...    98   3e-19
D7L825_ARALY (tr|D7L825) Putative uncharacterized protein OS=Ara...    87   7e-16
B9IAL8_POPTR (tr|B9IAL8) Predicted protein (Fragment) OS=Populus...    86   1e-15
Q9SJB5_ARATH (tr|Q9SJB5) Putative uncharacterized protein At2g04...    85   3e-15
Q500V1_ARATH (tr|Q500V1) At2g04560 OS=Arabidopsis thaliana PE=2 ...    85   3e-15
C5XK56_SORBI (tr|C5XK56) Putative uncharacterized protein Sb03g0...    84   4e-15
B4FP49_MAIZE (tr|B4FP49) Putative uncharacterized protein OS=Zea...    84   5e-15
Q5JMX5_ORYSJ (tr|Q5JMX5) Os01g0752600 protein OS=Oryza sativa su...    84   6e-15
B8A9H4_ORYSI (tr|B8A9H4) Putative uncharacterized protein OS=Ory...    84   6e-15
D7TEG2_VITVI (tr|D7TEG2) Whole genome shotgun sequence of line P...    81   4e-14
A9S6F1_PHYPA (tr|A9S6F1) Predicted protein OS=Physcomitrella pat...    70   8e-11
A9S6E4_PHYPA (tr|A9S6E4) Predicted protein (Fragment) OS=Physcom...    69   1e-10

>B9SSI8_RICCO (tr|B9SSI8) Lipid-A-disaccharide synthase, putative OS=Ricinus
          communis GN=RCOM_0511200 PE=4 SV=1
          Length = 469

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/79 (59%), Positives = 62/79 (78%), Gaps = 1/79 (1%)

Query: 4  KIIKNVNAGADMGFLR-QLRRYISVSSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMA 62
          +I  N++      FL+   RRY+SV+ +++M+ A ++GELRVF+ AGEVSGD+IGSRLMA
Sbjct: 7  RIWNNLSNNTTALFLKLHRRRYVSVTGRSIMEGACRNGELRVFIFAGEVSGDSIGSRLMA 66

Query: 63 SLKKLSPTPIRFAGVGGVL 81
          SLK LSPTPIRFAGVGG +
Sbjct: 67 SLKNLSPTPIRFAGVGGFM 85


>D7L825_ARALY (tr|D7L825) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_480096 PE=4 SV=1
          Length = 454

 Score = 86.7 bits (213), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/61 (68%), Positives = 51/61 (83%), Gaps = 1/61 (1%)

Query: 22 RRYISV-SSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGGV 80
          +RY S  ++K+V+D A  DGELRVF+V+GEVSGD IGSRLM+SLKKLSP P+RF GVGG 
Sbjct: 18 KRYSSFQATKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPLRFNGVGGS 77

Query: 81 L 81
          L
Sbjct: 78 L 78


>B9IAL8_POPTR (tr|B9IAL8) Predicted protein (Fragment) OS=Populus trichocarpa
          GN=POPTRDRAFT_246835 PE=4 SV=1
          Length = 120

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 47/51 (92%)

Query: 29 SKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGG 79
          S+TV+D+  KDGELRVF+VAGEVSGD+I SRLMASLKKLSP PIRF+GVGG
Sbjct: 1  SRTVVDMGDKDGELRVFIVAGEVSGDSIASRLMASLKKLSPLPIRFSGVGG 51


>Q9SJB5_ARATH (tr|Q9SJB5) Putative uncharacterized protein At2g04560
          OS=Arabidopsis thaliana GN=At2g04560 PE=2 SV=1
          Length = 161

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)

Query: 22 RRYISV-SSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGGV 80
          +RY S  ++K+V+D A  DGELRVF+V+GEVSGD IGSRLM+SLKKLSP PIRF GVGG 
Sbjct: 19 KRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFNGVGGS 78

Query: 81 L 81
          L
Sbjct: 79 L 79


>Q500V1_ARATH (tr|Q500V1) At2g04560 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 156

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 1/61 (1%)

Query: 22 RRYISV-SSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGGV 80
          +RY S  ++K+V+D A  DGELRVF+V+GEVSGD IGSRLM+SLKKLSP PIRF GVGG 
Sbjct: 19 KRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIRFNGVGGS 78

Query: 81 L 81
          L
Sbjct: 79 L 79


>C5XK56_SORBI (tr|C5XK56) Putative uncharacterized protein Sb03g034785
          (Fragment) OS=Sorghum bicolor GN=Sb03g034785 PE=4 SV=1
          Length = 445

 Score = 84.3 bits (207), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/56 (69%), Positives = 47/56 (83%)

Query: 26 SVSSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGGVL 81
          ++S   V+D A +DGELRVFVVAGEVSGD++ SRLMASL+ LSP P+RFAGVGG L
Sbjct: 3  ALSYGRVVDAAARDGELRVFVVAGEVSGDSLASRLMASLRALSPVPVRFAGVGGAL 58


>B4FP49_MAIZE (tr|B4FP49) Putative uncharacterized protein OS=Zea mays PE=2
          SV=1
          Length = 509

 Score = 84.0 bits (206), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 2/63 (3%)

Query: 19 RQLRRYISVSSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVG 78
          R L R  S+S   V+D A +DGELRVFVVAGEVSGD++ SRLMA+L+ LSP P+RFAGVG
Sbjct: 18 RPLAR--SLSYGRVVDAAARDGELRVFVVAGEVSGDSLASRLMAALRALSPVPVRFAGVG 75

Query: 79 GVL 81
          G L
Sbjct: 76 GEL 78


>Q5JMX5_ORYSJ (tr|Q5JMX5) Os01g0752600 protein OS=Oryza sativa subsp. japonica
          GN=P0435B05.24 PE=2 SV=1
          Length = 475

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/50 (76%), Positives = 44/50 (88%)

Query: 32 VMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGGVL 81
          V+D A +DGELRVFVVAGEVSGD++ SRLMASL+ LSP P+RFAGVGG L
Sbjct: 34 VVDAAARDGELRVFVVAGEVSGDSLASRLMASLRALSPVPVRFAGVGGEL 83


>B8A9H4_ORYSI (tr|B8A9H4) Putative uncharacterized protein OS=Oryza sativa
          subsp. indica GN=OsI_03760 PE=4 SV=1
          Length = 475

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/50 (76%), Positives = 44/50 (88%)

Query: 32 VMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGGVL 81
          V+D A +DGELRVFVVAGEVSGD++ SRLMASL+ LSP P+RFAGVGG L
Sbjct: 34 VVDAAARDGELRVFVVAGEVSGDSLASRLMASLRALSPVPVRFAGVGGEL 83


>D7TEG2_VITVI (tr|D7TEG2) Whole genome shotgun sequence of line PN40024,
          scaffold_59.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00030530001 PE=4 SV=1
          Length = 432

 Score = 80.9 bits (198), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/45 (82%), Positives = 41/45 (91%)

Query: 35 IAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGG 79
          +A KD ELRVF+V+GEVSGDTIGSRLMASLK +SP PIRFAGVGG
Sbjct: 1  MAAKDSELRVFIVSGEVSGDTIGSRLMASLKGISPFPIRFAGVGG 45


>A9S6F1_PHYPA (tr|A9S6F1) Predicted protein OS=Physcomitrella patens subsp.
          patens GN=PHYPADRAFT_124635 PE=4 SV=1
          Length = 410

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 40/57 (70%)

Query: 23 RYISVSSKTVMDIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGG 79
          R+ S  S    D+     ELRVF+V GE SGD IGSRLM SL++LSP P+RFAGVGG
Sbjct: 31 RFASPLSNVASDVGDSVEELRVFIVVGEPSGDVIGSRLMGSLRRLSPKPLRFAGVGG 87


>A9S6E4_PHYPA (tr|A9S6E4) Predicted protein (Fragment) OS=Physcomitrella patens
          subsp. patens GN=PHYPADRAFT_43224 PE=4 SV=1
          Length = 397

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/46 (67%), Positives = 37/46 (80%)

Query: 34 DIAGKDGELRVFVVAGEVSGDTIGSRLMASLKKLSPTPIRFAGVGG 79
          D    + +LRVF+VAGE SGD IGSRLM SL++LSP P+RFAGVGG
Sbjct: 1  DAGDSEEDLRVFIVAGEPSGDVIGSRLMGSLRRLSPKPLRFAGVGG 46