Jatropha Genome Database

JcCB0393011.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0393011.10 + phase: 0 
         (67 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S4G3_RICCO (tr|B9S4G3) Putative uncharacterized protein OS=Ric...   130   4e-29
B9IQ59_POPTR (tr|B9IQ59) Predicted protein OS=Populus trichocarp...    88   3e-16
D7T4C3_VITVI (tr|D7T4C3) Whole genome shotgun sequence of line P...    86   2e-15
B9I8E2_POPTR (tr|B9I8E2) Predicted protein (Fragment) OS=Populus...    79   2e-13

>B9S4G3_RICCO (tr|B9S4G3) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0690110 PE=4 SV=1
          Length = 593

 Score =  130 bits (328), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 61/67 (91%)

Query: 1   MQLHCDHGLQGFQWNTIFGFQHQETSENYTRIGKADSSERELAVRAAAASIYSTCSFLMS 60
           MQLHCD GLQ F WN +FGFQ QETSENYTRIGKADS+ERELAVRAAAASIYSTCS LMS
Sbjct: 527 MQLHCDQGLQNFLWNPMFGFQQQETSENYTRIGKADSTERELAVRAAAASIYSTCSLLMS 586

Query: 61  KENVSCF 67
           KENVSCF
Sbjct: 587 KENVSCF 593


>B9IQ59_POPTR (tr|B9IQ59) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_574117 PE=4 SV=1
          Length = 582

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/67 (64%), Positives = 48/67 (71%), Gaps = 9/67 (13%)

Query: 1   MQLHCDHGLQGFQWNTIFGFQHQETSENYTRIGKADSSERELAVRAAAASIYSTCSFLMS 60
           MQ+HCD GLQ   +N I G         Y R  KADSS++ELAVRAAAASIYSTC+FL S
Sbjct: 525 MQVHCDQGLQHLHYNAILG---------YPRTEKADSSQKELAVRAAAASIYSTCNFLSS 575

Query: 61  KENVSCF 67
           KENVSCF
Sbjct: 576 KENVSCF 582


>D7T4C3_VITVI (tr|D7T4C3) Whole genome shotgun sequence of line PN40024,
           scaffold_67.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00032673001 PE=4 SV=1
          Length = 559

 Score = 85.5 bits (210), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/67 (64%), Positives = 50/67 (74%), Gaps = 1/67 (1%)

Query: 1   MQLHCDHGLQGFQWNTIFGFQHQETSENYTRIGKADSSERELAVRAAAASIYSTCSFLMS 60
           MQ+HC+ GLQ FQWN +  +QH  T  N  R    D SERELA+RAAAASIYSTC+FL+S
Sbjct: 494 MQMHCERGLQHFQWN-LPHWQHPGTIINDPRPQMVDDSERELAIRAAAASIYSTCNFLLS 552

Query: 61  KENVSCF 67
            ENVSCF
Sbjct: 553 MENVSCF 559


>B9I8E2_POPTR (tr|B9I8E2) Predicted protein (Fragment) OS=Populus trichocarpa
           GN=POPTRDRAFT_663449 PE=4 SV=1
          Length = 201

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 45/67 (67%), Gaps = 9/67 (13%)

Query: 1   MQLHCDHGLQGFQWNTIFGFQHQETSENYTRIGKADSSERELAVRAAAASIYSTCSFLMS 60
           MQ+H D GLQ   +  I G         Y R  KADS ++ELAVRAAAASIYSTC+FL S
Sbjct: 144 MQVHFDQGLQHLSYKAILG---------YPRTEKADSLQKELAVRAAAASIYSTCNFLTS 194

Query: 61  KENVSCF 67
           KENVSCF
Sbjct: 195 KENVSCF 201