Jatropha Genome Database
- JcCB0392311.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0392311.10 + phase: 0
(143 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9S0Z3_RICCO (tr|B9S0Z3) Putative uncharacterized protein OS=Ric... 142 8e-33
B9HYV7_POPTR (tr|B9HYV7) Predicted protein OS=Populus trichocarp... 123 6e-27
B9S0Z2_RICCO (tr|B9S0Z2) Putative uncharacterized protein OS=Ric... 118 2e-25
A5AT04_VITVI (tr|A5AT04) Putative uncharacterized protein OS=Vit... 113 8e-24
D7TK98_VITVI (tr|D7TK98) Whole genome shotgun sequence of line P... 112 2e-23
C6T1G4_SOYBN (tr|C6T1G4) Putative uncharacterized protein OS=Gly... 110 3e-23
A5AXS4_VITVI (tr|A5AXS4) Putative uncharacterized protein OS=Vit... 109 9e-23
C6SVN6_SOYBN (tr|C6SVN6) Putative uncharacterized protein OS=Gly... 104 4e-21
D7SSZ7_VITVI (tr|D7SSZ7) Whole genome shotgun sequence of line P... 100 5e-20
D7TKA0_VITVI (tr|D7TKA0) Whole genome shotgun sequence of line P... 96 2e-18
D7KER1_ARALY (tr|D7KER1) Predicted protein OS=Arabidopsis lyrata... 86 2e-15
B9HDF1_POPTR (tr|B9HDF1) Predicted protein OS=Populus trichocarp... 81 3e-14
D7TK99_VITVI (tr|D7TK99) Whole genome shotgun sequence of line P... 79 1e-13
A5C909_VITVI (tr|A5C909) Putative uncharacterized protein OS=Vit... 75 3e-12
D7LH24_ARALY (tr|D7LH24) Putative uncharacterized protein (Fragm... 74 6e-12
D7MX31_ARALY (tr|D7MX31) Putative uncharacterized protein OS=Ara... 69 2e-10
>B9S0Z3_RICCO (tr|B9S0Z3) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0631830 PE=4 SV=1
Length = 139
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 91/140 (65%), Gaps = 11/140 (7%)
Query: 1 MRRNCNLELRLFPFPDSDD--DHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGNI 58
MRRNCNLELRLFPF D DD H D SNKSP +LTIFYNGN+
Sbjct: 1 MRRNCNLELRLFPFSDPDDHLQHSSSMEDFSNKSPRQEGQQQQ-------QLTIFYNGNV 53
Query: 59 CVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXX--XXVYSPNNGLSMKRSLQR 116
CVCDVT+ QAR IL+LAS+EM+ K R + +YSPNNGLSMKRSLQR
Sbjct: 54 CVCDVTDFQARAILLLASKEMEHKPRRSPSGSSSEPASPTLPSPIYSPNNGLSMKRSLQR 113
Query: 117 FLQKRNHRIQATYPYNINGR 136
FLQKRNHRIQAT PY+IN R
Sbjct: 114 FLQKRNHRIQATCPYSINRR 133
>B9HYV7_POPTR (tr|B9HYV7) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_822828 PE=4 SV=1
Length = 149
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 84/136 (61%), Gaps = 9/136 (6%)
Query: 1 MRRNCNLELRLFPFPDSDDDHRRY--FVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGNI 58
M+RNCNLELRL DSD+ H RY V+ SN+S +LTIFYNG +
Sbjct: 1 MKRNCNLELRLHTPADSDNHHHRYQPLVEASNES-----RQLELEQQEQKQLTIFYNGRV 55
Query: 59 CVCDVTELQARNILMLASREMDDKIRS-AXXXXXXXXXXXXXXVYSPNNGLSMKRSLQRF 117
VCDV ELQAR ILMLASREM+D++RS +YSP GL MKRSLQRF
Sbjct: 56 LVCDVAELQARAILMLASREMEDRLRSPVGSEPSASSPISPSQLYSP-VGLPMKRSLQRF 114
Query: 118 LQKRNHRIQATYPYNI 133
L+KR HRIQAT+P +
Sbjct: 115 LKKRKHRIQATFPCKV 130
>B9S0Z2_RICCO (tr|B9S0Z2) Putative uncharacterized protein OS=Ricinus communis
GN=RCOM_0631620 PE=4 SV=1
Length = 164
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Query: 1 MRRNCNLELRLFPFPDSDDDHRR---YFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGN 57
MRRNC+LELR PF DS +HR V S +LTIFYNG
Sbjct: 25 MRRNCSLELRPVPFSDSGHNHREQQAMSVSFLLVSSFFLSVILSESPQERQQLTIFYNGR 84
Query: 58 ICVCDVTELQARNILMLASREMDDKIRSAXXXX----XXXXXXXXXXVYSPNNGLSMKRS 113
+CVC VTELQAR IL LASREM+DK++++ + SP+ GLSMKRS
Sbjct: 85 VCVCYVTELQARAILSLASREMEDKMKTSLLGTPTGRSEFVSPLPSPLCSPSTGLSMKRS 144
Query: 114 LQRFLQKRNHRIQATYPYN 132
+QRFLQKR HR QAT PYN
Sbjct: 145 IQRFLQKRKHRAQATSPYN 163
>A5AT04_VITVI (tr|A5AT04) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_033493 PE=4 SV=1
Length = 127
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 81/135 (60%), Gaps = 15/135 (11%)
Query: 2 RRNCNLELRLFPFPDSD----DDHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGN 57
RRNCNLELRL P P++D H ++ SP +LTIFYNG
Sbjct: 3 RRNCNLELRLLP-PNTDYSSPQHHHNMMMETGRGSPQEQQQQQ--------QLTIFYNGR 53
Query: 58 ICVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLSMKRSLQRF 117
ICVCDVTELQAR IL+LASREM++K R+ +YS GLSMKRSLQRF
Sbjct: 54 ICVCDVTELQARAILLLASREMEEKTRTP-TASDATSPSLHSQLYS-ATGLSMKRSLQRF 111
Query: 118 LQKRNHRIQATYPYN 132
LQKR +R++AT PY+
Sbjct: 112 LQKRKNRMEATSPYH 126
>D7TK98_VITVI (tr|D7TK98) Whole genome shotgun sequence of line PN40024,
scaffold_3.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00021516001 PE=4 SV=1
Length = 127
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 80/135 (59%), Gaps = 15/135 (11%)
Query: 2 RRNCNLELRLFPFPDSD----DDHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGN 57
R NCNLE+RL P P++D H ++ SP +LTIFYNG
Sbjct: 3 RSNCNLEVRLLP-PNTDYSSPQHHHNMMMETGRGSPQEQQQRQ--------QLTIFYNGR 53
Query: 58 ICVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLSMKRSLQRF 117
ICVCDVTELQAR IL LASREM++K R+ +YSP GLSMKRSLQRF
Sbjct: 54 ICVCDVTELQARAILQLASREMEEKTRTP-TASDAISSSLHSQLYSP-TGLSMKRSLQRF 111
Query: 118 LQKRNHRIQATYPYN 132
LQKR +R++AT PY+
Sbjct: 112 LQKRKNRMEATSPYH 126
>C6T1G4_SOYBN (tr|C6T1G4) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 138
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Query: 1 MRRNCNLELRLFPFPDSDDDHRRYFVDESNK-SPXXX--XXXXXXXXXXXXKLTIFYNGN 57
MRRNCNLEL LF DS H V+E+++ SP LTIFY+GN
Sbjct: 1 MRRNCNLELALFLPSDSGPRHHHSMVEEASEISPIQNFFHHHHRQEQQQQQPLTIFYDGN 60
Query: 58 ICVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXX--XVYSPNNGLSMKRSLQ 115
ICV DVTELQA++IL+LA+R++++++R+ +YSP GLSM++SLQ
Sbjct: 61 ICVADVTELQAKSILLLANRKLEERVRTPTGSEPSSPAVMQSNNQLYSPGTGLSMRKSLQ 120
Query: 116 RFLQKRNHRIQATYPYN 132
RFLQKR +R+Q PY+
Sbjct: 121 RFLQKRKNRVQEASPYH 137
>A5AXS4_VITVI (tr|A5AXS4) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_026095 PE=4 SV=1
Length = 127
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 79/135 (58%), Gaps = 15/135 (11%)
Query: 2 RRNCNLELRLFPFPDSD----DDHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGN 57
R NCNLE+RL P P++D H ++ SP +LTIFYNG
Sbjct: 3 RXNCNLEVRLLP-PNTDYSSPQHHHNMMMETGRGSPQEQQQRQ--------QLTIFYNGR 53
Query: 58 ICVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLSMKRSLQRF 117
ICVC VTELQAR IL LASREM++K R+ +YSP GLSMKRSLQRF
Sbjct: 54 ICVCXVTELQARAILQLASREMEEKTRTP-TASDAISSSLHSQLYSP-TGLSMKRSLQRF 111
Query: 118 LQKRNHRIQATYPYN 132
LQKR +R++AT PY+
Sbjct: 112 LQKRKNRMEATSPYH 126
>C6SVN6_SOYBN (tr|C6SVN6) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 150
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 77/136 (56%), Gaps = 6/136 (4%)
Query: 1 MRRNCNLELRLFPFPDSDDDHRRYFVDESNK--SPXXXXXXXXXXXXXXXKLTIFYNGNI 58
MR+NCNLELRLFP S D R E ++ LTIFY+G I
Sbjct: 1 MRKNCNLELRLFP--PSLSDLRPMMEAEVSERPQQQVAHHQQQQQPQPQHPLTIFYDGKI 58
Query: 59 CVCDVTELQARNILMLASREMDDKIRS--AXXXXXXXXXXXXXXVYSPNNGLSMKRSLQR 116
V DVTELQAR+ILMLA++EM+ ++ + +YSP GLSMKRSLQR
Sbjct: 59 SVSDVTELQARSILMLANKEMEKRVMTPTGSEPSSPILLQSPHNMYSPGTGLSMKRSLQR 118
Query: 117 FLQKRNHRIQATYPYN 132
FLQKR +R+Q T PY+
Sbjct: 119 FLQKRKNRVQETSPYH 134
>D7SSZ7_VITVI (tr|D7SSZ7) Whole genome shotgun sequence of line PN40024,
scaffold_501.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00007188001 PE=4 SV=1
Length = 98
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 50 LTIFYNGNICVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLS 109
LTIFYNG ICVCDVTELQAR IL+ ASREM++K R+ +YSP GLS
Sbjct: 17 LTIFYNGRICVCDVTELQARAILLFASREMEEKTRTP-TASDAISPSLHSQIYSP-TGLS 74
Query: 110 MKRSLQRFLQKRNHRIQATYPYN 132
MKRSLQRFLQKR +R++AT PY+
Sbjct: 75 MKRSLQRFLQKRKNRMEATSPYH 97
>D7TKA0_VITVI (tr|D7TKA0) Whole genome shotgun sequence of line PN40024,
scaffold_3.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00021519001 PE=4 SV=1
Length = 130
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 73/130 (56%), Gaps = 13/130 (10%)
Query: 3 RNCNLELRLFPFPDSDDDHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGNICVCD 62
RNCNLEL L P S + ++ SP +LTIFY+G +CVC+
Sbjct: 13 RNCNLELSLLP---STAYRHKMMMEMGRGSPQEQQQQQ--------QLTIFYDGRVCVCE 61
Query: 63 VTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLSMKRSLQRFLQKRN 122
VTELQAR I++ ASRE++ K +A +YSP GLSMKRSL+ FLQKR
Sbjct: 62 VTELQARAIILTASREVETKTPTA-SDVTMVSPSLQSQLYSP-TGLSMKRSLRSFLQKRK 119
Query: 123 HRIQATYPYN 132
+RI+AT PY
Sbjct: 120 NRIEATSPYG 129
>D7KER1_ARALY (tr|D7KER1) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_680758 PE=4 SV=1
Length = 131
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 1 MRRNCNLELRLFPFPDSDDDHRRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGNICV 60
M++ C+LELRLFP D V ES S ++TIFYNG +C
Sbjct: 1 MQKTCDLELRLFPTSYDCDSSDTTSVVESTSS------GNLQPKEESQRMTIFYNGKMCF 54
Query: 61 C-DVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLSMKRSLQRFLQ 119
DVT LQA++I+ +A+REM+ K S PN SMK+SLQ FLQ
Sbjct: 55 SSDVTHLQAKSIISIANREMEKKSSSNGSDPPNKSTPFHHNQL-PNPKASMKKSLQSFLQ 113
Query: 120 KRNHRIQATYPYNINGRR 137
KR RIQAT PY+ + RR
Sbjct: 114 KRKSRIQATSPYHQHPRR 131
>B9HDF1_POPTR (tr|B9HDF1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_560260 PE=4 SV=1
Length = 120
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 50 LTIFYNGNICVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLS 109
LTIFYNG I VCDVTE QAR I+ LASRE ++ RS ++SP GLS
Sbjct: 40 LTIFYNGRISVCDVTEFQARAIIWLASREKEE--RSNTTRSNQAPKPLHSQLHSP-PGLS 96
Query: 110 MKRSLQRFLQKRNHRIQATYPY 131
+KRSLQRFLQKR R +A PY
Sbjct: 97 LKRSLQRFLQKRKKRAEAISPY 118
>D7TK99_VITVI (tr|D7TK99) Whole genome shotgun sequence of line PN40024,
scaffold_3.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00021518001 PE=4 SV=1
Length = 96
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Query: 50 LTIFYNGNICVCDVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSPNNGLS 109
LTIFYNG ICV DVTEL+AR I++ ASREM+++ R+ + P +G+S
Sbjct: 20 LTIFYNGRICVSDVTELRARAIILAASREMEERKRAP------LSPSMQSQLCGP-SGVS 72
Query: 110 MKRSLQRFLQKRNHRIQATYPYN 132
MKRSL RFLQKR +R +A PYN
Sbjct: 73 MKRSLHRFLQKRKNRREAMSPYN 95
>A5C909_VITVI (tr|A5C909) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_007759 PE=4 SV=1
Length = 121
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 57/106 (53%), Gaps = 25/106 (23%)
Query: 50 LTIFYNGNICVCDVTELQ-----------------------ARNILMLASREMDDKIRSA 86
LTIFY+G +CVC+VTELQ AR I++ ASRE++ K +A
Sbjct: 17 LTIFYDGRVCVCEVTELQGLFMNPADQVFLWAVVPFGYMYEARAIILTASREVETKTPTA 76
Query: 87 XXXXXXXXXXXXXXVYSPNNGLSMKRSLQRFLQKRNHRIQATYPYN 132
+YSP GLSMKRSL+ FLQKR +RI+AT PY
Sbjct: 77 SDVTMVSPSLQSQ-LYSPT-GLSMKRSLRSFLQKRKNRIEATSPYG 120
>D7LH24_ARALY (tr|D7LH24) Putative uncharacterized protein (Fragment)
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482423
PE=4 SV=1
Length = 161
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 65/115 (56%), Gaps = 12/115 (10%)
Query: 22 RRYFVDESNKSPXXXXXXXXXXXXXXXKLTIFYNGNICVC-DVTELQARNILMLASREMD 80
+RY VD+S+ S LTIFYNG++CV D+T L+A+ IL LASR+++
Sbjct: 54 QRYLVDKSSSSEISQPKHESQI------LTIFYNGHMCVSSDLTHLEAKAILSLASRDVE 107
Query: 81 DKIRSAXXXXXXXXXXXXXXVYSP---NNGLSMKRSLQRFLQKRNHRIQATYPYN 132
+ RS YSP N +SMKRSL+ FLQKRN RIQAT PY+
Sbjct: 108 E--RSLSLKSSDDSEPPTLPKYSPRFHNQKVSMKRSLRSFLQKRNVRIQATSPYS 160
>D7MX31_ARALY (tr|D7MX31) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_333262 PE=4 SV=1
Length = 130
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 50 LTIFYNGNICVC-DVTELQARNILMLASREMDDKIRSAXXXXXXXXXXXXXXVYSP---N 105
LTIFYNG++CV D+T L+A+ IL LASR++++ RS YS N
Sbjct: 45 LTIFYNGHMCVSSDLTHLEAKAILSLASRDVEE--RSLSLKSSDDSEPPTLPKYSTRFHN 102
Query: 106 NGLSMKRSLQRFLQKRNHRIQATYPYN 132
+SMKRSL+ FLQKRN RIQAT PY+
Sbjct: 103 QKVSMKRSLRSFLQKRNVRIQATSPYS 129