Jatropha Genome Database

JcCB0389381.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0389381.20 - phase: 2 /partial
         (66 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RH77_RICCO (tr|B9RH77) ATP binding protein, putative OS=Ricinu...    57   5e-07

>B9RH77_RICCO (tr|B9RH77) ATP binding protein, putative OS=Ricinus communis
           GN=RCOM_1447940 PE=3 SV=1
          Length = 501

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 43/67 (64%), Gaps = 9/67 (13%)

Query: 1   GEQLMKSDEPEMPLRGLIEFLEHK---------IEDDEGKKREELSVAAEAEGLQKLEIE 51
           GEQLMKS+EPE+ LRGL EFLEHK          E DE   + E S  AEAEG QK E+ 
Sbjct: 434 GEQLMKSEEPEVALRGLTEFLEHKGTEEEERKKRESDERIAKIEESGLAEAEGSQKQEMS 493

Query: 52  NGKVEKR 58
           NG VEK+
Sbjct: 494 NGFVEKK 500