Jatropha Genome Database

JcCB0368851.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0368851.10 - phase: 0 /pseudo
         (66 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RGY6_RICCO (tr|B9RGY6) Light-regulated protein, putative OS=Ri...    91   4e-17
Q7M1K1_CITPA (tr|Q7M1K1) Ccr protein OS=Citrus paradisi PE=4 SV=1      59   1e-07
B9IA79_POPTR (tr|B9IA79) Predicted protein OS=Populus trichocarp...    59   1e-07
Q84N27_9ROSI (tr|Q84N27) CCR protein OS=x Citrofortunella mitis ...    57   7e-07
B1Q4T3_9ROSI (tr|B1Q4T3) CCR protein OS=Bruguiera gymnorhiza PE=...    56   1e-06

>B9RGY6_RICCO (tr|B9RGY6) Light-regulated protein, putative OS=Ricinus communis
          GN=RCOM_1445410 PE=4 SV=1
          Length = 140

 Score = 90.9 bits (224), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 53/63 (84%)

Query: 1  MQAALTIAPPVVPLKPSKNLSQVTFSPPKFGVSSIAPRSSAIKAATATVEYEPSTVDYSS 60
          MQAAL+IAPPV P+KPSKNLSQV  SPP+ G SS+APR+S IKAA ATV Y+ STVDYSS
Sbjct: 1  MQAALSIAPPVFPVKPSKNLSQVILSPPQLGASSLAPRASPIKAAYATVAYDTSTVDYSS 60

Query: 61 TLS 63
           +S
Sbjct: 61 VIS 63


>Q7M1K1_CITPA (tr|Q7M1K1) Ccr protein OS=Citrus paradisi PE=4 SV=1
          Length = 159

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 2/64 (3%)

Query: 1  MQAALTIAPP-VVPLKPSKNLSQVTFSPPKFGVSSIAPRSSAIKAATATVEYEPSTVDYS 59
          MQAAL+I+P  +VPL  SKN SQV  S PK   SS+A R SAIK A AT   +PST DY+
Sbjct: 19 MQAALSISPTTLVPLTTSKNFSQVAISTPKLVGSSLASRRSAIKVA-ATTSNDPSTFDYN 77

Query: 60 STLS 63
          S  S
Sbjct: 78 SAFS 81


>B9IA79_POPTR (tr|B9IA79) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_572879 PE=4 SV=1
          Length = 126

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 49/64 (76%), Gaps = 4/64 (6%)

Query: 1  MQAALTIAPPVVPLKPSKNLSQV-TFSPPKFGVSSIAPRSSAIKAATATVEYEPSTVDYS 59
          MQAAL IAPPV+PLKP KNL Q+ TF+PPK G +S+A RSSAIKA TA    + +TVD S
Sbjct: 1  MQAALFIAPPVLPLKPCKNLFQLQTFTPPKVG-ASLASRSSAIKATTAIA--DTTTVDCS 57

Query: 60 STLS 63
          S +S
Sbjct: 58 SVIS 61


>Q84N27_9ROSI (tr|Q84N27) CCR protein OS=x Citrofortunella mitis PE=2 SV=1
          Length = 140

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 1  MQAALTIAPP-VVPLKPSKNLSQVTFSPPKFGVSSIAPRSSAIKAATATVEYEPSTVDYS 59
          MQAAL+I+P  +VPL  SKN SQV    PK   SS+A R SAIK A AT   +PST DY+
Sbjct: 1  MQAALSISPTTLVPLTTSKNFSQVAIYTPKLVGSSLASRRSAIKVA-ATTSNDPSTFDYN 59

Query: 60 STLS 63
          S  S
Sbjct: 60 SAFS 63


>B1Q4T3_9ROSI (tr|B1Q4T3) CCR protein OS=Bruguiera gymnorhiza PE=4 SV=1
          Length = 91

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 3/63 (4%)

Query: 1  MQAALTIAPPVVPLKPSKNLSQVTFSPPKFGVSSIAPRSSAIKAATATVEYEPSTVDYSS 60
          MQAAL I  P++PL PSKN  Q+T  P   G  S+A R SAIKA   +V Y+ STVDYSS
Sbjct: 1  MQAALKITLPILPLNPSKNAPQMTIIPRGVG-GSLASRCSAIKA--TSVAYDTSTVDYSS 57

Query: 61 TLS 63
            S
Sbjct: 58 LTS 60