Jatropha Genome Database

JcCB0365891.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0365891.10 + phase: 2 /pseudo/partial
         (154 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RDM6_RICCO (tr|B9RDM6) Putative uncharacterized protein OS=Ric...   105   2e-21
B9IC98_POPTR (tr|B9IC98) Predicted protein OS=Populus trichocarp...   101   2e-20
D7UC21_VITVI (tr|D7UC21) Whole genome shotgun sequence of line P...    91   4e-17
B9GPX1_POPTR (tr|B9GPX1) Predicted protein OS=Populus trichocarp...    80   7e-14

>B9RDM6_RICCO (tr|B9RDM6) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1614480 PE=4 SV=1
          Length = 282

 Score =  105 bits (261), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 4/102 (3%)

Query: 27  KFKGVVNPATLRKRL-QKISRMLEKVGKAVAP---TGEGESMSRMASLSEGPTLFKSPSK 82
           + +GVV+P+ LRK +  + ++ +   G+   P   TGEG+SMSRM SL EGP  FKSPSK
Sbjct: 169 QVQGVVSPSLLRKVIITEAAKNIRDDGRGWRPAALTGEGDSMSRMGSLGEGPAAFKSPSK 228

Query: 83  SWKMTGSPRYASMEPRSPIIGDVVLNKIEEVSRSVKVWNFLV 124
           +WK+  SPRYAS+EPRS I G+V+LNK+EEVS+SVK    L+
Sbjct: 229 TWKVMNSPRYASLEPRSAIPGEVLLNKLEEVSKSVKKIELLI 270


>B9IC98_POPTR (tr|B9IC98) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_572208 PE=4 SV=1
          Length = 271

 Score =  101 bits (252), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 68/95 (71%), Gaps = 3/95 (3%)

Query: 27  KFKGVVNPATLRKRL-QKISRMLEKVGKAVAPT--GEGESMSRMASLSEGPTLFKSPSKS 83
           + +GV +P  LRK +  + S+  +  GK   PT  GE E +SR  SLSEGP +FKSPSKS
Sbjct: 161 QVQGVADPGVLRKVIITEASKNAQDFGKGCKPTLTGEEERLSRGGSLSEGPVIFKSPSKS 220

Query: 84  WKMTGSPRYASMEPRSPIIGDVVLNKIEEVSRSVK 118
           WK+TGSPRY S+E R  I G+V+LNK+EEVS+SVK
Sbjct: 221 WKITGSPRYTSLEHRGLIQGEVLLNKLEEVSKSVK 255


>D7UC21_VITVI (tr|D7UC21) Whole genome shotgun sequence of line PN40024,
           scaffold_46.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00026819001 PE=4 SV=1
          Length = 277

 Score = 90.9 bits (224), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 5/101 (4%)

Query: 29  KGVVNPATLRKRL-QKISRMLEKVG---KAVAPTGEGESMSRMASLSEGPT-LFKSPSKS 83
           +GV NP  LRK +  + +++L++VG   K  A TGEGES+ RM SL+EGP  L +SPSKS
Sbjct: 167 QGVSNPGLLRKVIITEAAKVLQEVGTNWKPPALTGEGESVVRMTSLTEGPAVLLRSPSKS 226

Query: 84  WKMTGSPRYASMEPRSPIIGDVVLNKIEEVSRSVKVWNFLV 124
            K+TGSPR+   + +S I GD++LNK+EEV++SVK   FL+
Sbjct: 227 LKITGSPRHTPADRKSIIPGDLLLNKLEEVTKSVKKIEFLI 267


>B9GPX1_POPTR (tr|B9GPX1) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_644414 PE=4 SV=1
          Length = 284

 Score = 80.1 bits (196), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 14/106 (13%)

Query: 27  KFKGVVNPATLRKRL-QKISRMLEKVGKAVAPT--GEGESMSRMASLSEGPTLFKSPSKS 83
           + +GV +P  LRK +  + S+ ++  GK   PT   E E +SR+ SL+EGP +FKSP KS
Sbjct: 163 QVQGVADPGVLRKVIITEASKNVQDFGKGWNPTLTIEEEGLSRVGSLNEGPAVFKSPPKS 222

Query: 84  WKMTGSPRYASMEPR-SP----------IIGDVVLNKIEEVSRSVK 118
           WKMTGSPRYAS E R SP          I G+++L+K+ EV  SVK
Sbjct: 223 WKMTGSPRYASSEHRGSPRYASSEHKGLIHGEMLLSKLGEVCESVK 268