Jatropha Genome Database

JcCB0361311.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0361311.10 + phase: 1 /TE/partial
         (252 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5C0B1_VITVI (tr|A5C0B1) Putative uncharacterized protein OS=Vit...    68   1e-09
B9RRP7_RICCO (tr|B9RRP7) Putative uncharacterized protein OS=Ric...    64   2e-08
B9S3R7_RICCO (tr|B9S3R7) Putative uncharacterized protein OS=Ric...    57   1e-06
B9SK13_RICCO (tr|B9SK13) Putative uncharacterized protein OS=Ric...    55   7e-06

>A5C0B1_VITVI (tr|A5C0B1) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_000588 PE=4 SV=1
          Length = 689

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 12/98 (12%)

Query: 2   FDRLPIQVQDHVLEAGFGRFVDTLPRVXGRTPSS------ILVLMERWMDITHTFHLPFG 55
           +D+L   V+  V  AGFGRF+ +L       PSS      ++ L ERW D T T H PFG
Sbjct: 68  YDKLDPVVKQKVDNAGFGRFISSL------CPSSRAEKVRVISLAERWWDTTGTLHFPFG 121

Query: 56  EMTINPMDFVAIIGLPFGGRSIAFDEQLRTSDRLGLRA 93
           E+ + P DF  I GL  GG+ I ++  +  S+   L+A
Sbjct: 122 EVGMTPYDFSVITGLRIGGKPIPYNAGVHRSEDDLLKA 159


>B9RRP7_RICCO (tr|B9RRP7) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1426100 PE=4 SV=1
          Length = 276

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 7/58 (12%)

Query: 21 FVDTLPRVXGRTP----SSILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGG 74
          F+ TLPR+   TP    +++  L+ERW D T+TF LPFGE TI P+DF A+IG+ FGG
Sbjct: 9  FLSTLPRL---TPKNNATAMTTLLERWSDTTYTFLLPFGEKTIMPLDFTALIGIRFGG 63


>B9S3R7_RICCO (tr|B9S3R7) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0827030 PE=4 SV=1
          Length = 263

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 7/77 (9%)

Query: 5   LPIQVQDHVLEAGFGRFVDTLPRVXGRTP----SSILVLMERWMDITHTFHLPFGEMTIN 60
           +P  V++ V    F  F+ TLP   G  P    ++  VL+ERW + +HTF LPF ++T  
Sbjct: 57  IPTHVKEQVEVTDFHHFLGTLP---GFNPRYNLTTPTVLLERWSNTSHTFLLPFRKITDI 113

Query: 61  PMDFVAIIGLPFGGRSI 77
           P+DFVA++G+ FGG S+
Sbjct: 114 PLDFVALMGIQFGGVSL 130


>B9SK13_RICCO (tr|B9SK13) Putative uncharacterized protein OS=Ricinus communis
          GN=RCOM_1004580 PE=4 SV=1
          Length = 230

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 17 GFGRFVDTLPRVXGRTPS-SILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGG 74
          GF  F+ TL R   +    ++  L+ERW D THTF LPFGEMTI  +DF+A+  + F G
Sbjct: 39 GFNTFLGTLTRFKPKNEVIAVTTLLERWSDTTHTFLLPFGEMTITSLDFIALTRVRFDG 97