Jatropha Genome Database

JcCB0359061.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0359061.20 - phase: 0 
         (131 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9HR24_POPTR (tr|B9HR24) Predicted protein OS=Populus trichocarp...    98   3e-19
B9S5H9_RICCO (tr|B9S5H9) Putative uncharacterized protein OS=Ric...    96   2e-18
B9H1L6_POPTR (tr|B9H1L6) Predicted protein OS=Populus trichocarp...    94   7e-18

>B9HR24_POPTR (tr|B9HR24) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_557046 PE=4 SV=1
          Length = 133

 Score = 98.2 bits (243), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/131 (45%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 2   EYLRVAEGRGSPKREFRSVKGXXXXXXXXXXXXESIAQSNGGSVVSQAA-NEDGVVRMKI 60
           + L V+EG+ SPKR+FR+++G            ESIAQ N GSVVS    +EDG VRMK+
Sbjct: 3   QCLEVSEGKASPKRDFRALRGRNHRSLKSNLL-ESIAQVNDGSVVSHTNEDEDGFVRMKL 61

Query: 61  LVKKQDLKQMLELVRXXXXXXXXXXXXXXXXXVEQXXXXXXXXXXXXVNAGKESRRRSAW 120
           +V+KQDLK+MLEL+R                 +EQ             NA K S RRS W
Sbjct: 62  VVRKQDLKRMLELMRGCESSTNQSYSPASSLSLEQRLNLLRRKHLSRSNAAKGSCRRS-W 120

Query: 121 IPALQSIPEEF 131
            PALQSIPEE 
Sbjct: 121 TPALQSIPEEL 131


>B9S5H9_RICCO (tr|B9S5H9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0976160 PE=4 SV=1
          Length = 129

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/129 (49%), Positives = 73/129 (56%), Gaps = 5/129 (3%)

Query: 4   LRVAEG-RGSPKREFRSVKGXXXXXXXXXXXXESIAQSNGGSVVSQAANEDGVVRMKILV 62
           LRVAEG + S KRE RS++G            ESIAQ NGGSVVS   NEDGVVRMK+LV
Sbjct: 3   LRVAEGNKASSKREIRSLRGKNHRSLRNNLL-ESIAQVNGGSVVSHR-NEDGVVRMKLLV 60

Query: 63  KKQDLKQMLELVRX-XXXXXXXXXXXXXXXXVEQXXXXXXXXXXXXVNAGKESRRRSAWI 121
           +KQDL+QMLEL++                  VEQ             NA KES R   W+
Sbjct: 61  RKQDLRQMLELIKSGKNNSHQASFSLSSSSCVEQRLNLLWRKHLSRANAVKES-RHGCWV 119

Query: 122 PALQSIPEE 130
           PALQSIPEE
Sbjct: 120 PALQSIPEE 128


>B9H1L6_POPTR (tr|B9H1L6) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_556674 PE=4 SV=1
          Length = 129

 Score = 93.6 bits (231), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/129 (44%), Positives = 71/129 (55%), Gaps = 3/129 (2%)

Query: 2   EYLRVAEGRGSPKREFRSVKGXXXXXXXXXXXXESIAQSNGGSVVSQAANEDGVVRMKIL 61
           +YLRV+EG+ SPKR+FR++              ESI Q NGG VVS   NE+G VRMK++
Sbjct: 3   QYLRVSEGKASPKRDFRALLRGRNHRSLKSNLPESIGQVNGGCVVSHT-NENGFVRMKLV 61

Query: 62  VKKQDLKQMLELVR-XXXXXXXXXXXXXXXXXVEQXXXXXXXXXXXXVNAGKESRRRSAW 120
           V+KQDLKQMLE++R                  +EQ             N+ K S RRS W
Sbjct: 62  VRKQDLKQMLEVMRGGKSNANQASYSPVSSLSLEQRLNLLRRKHLSRSNSAKGSCRRS-W 120

Query: 121 IPALQSIPE 129
            PALQSIPE
Sbjct: 121 TPALQSIPE 129