Jatropha Genome Database
- JcCB0352111.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0352111.10 - phase: 0 /partial
(62 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9T018_RICCO (tr|B9T018) Cofactor required for Sp1 transcription... 118 2e-25
D7TI87_VITVI (tr|D7TI87) Whole genome shotgun sequence of line P... 113 7e-24
B9IIE0_POPTR (tr|B9IIE0) Predicted protein OS=Populus trichocarp... 112 1e-23
D7M806_ARALY (tr|D7M806) Transcription coactivator OS=Arabidopsi... 110 7e-23
B0BLB1_LOTJA (tr|B0BLB1) CM0545.310.nc protein OS=Lotus japonicu... 108 2e-22
Q9LYW3_ARATH (tr|Q9LYW3) AT5g03220 OS=Arabidopsis thaliana GN=F1... 107 4e-22
C6TKC3_SOYBN (tr|C6TKC3) Putative uncharacterized protein OS=Gly... 107 4e-22
Q8L8V0_ARATH (tr|Q8L8V0) Transcription co-activator-like protein... 107 4e-22
Q9LZD7_ARATH (tr|Q9LZD7) AT5G03500 protein OS=Arabidopsis thalia... 107 5e-22
D7LWQ4_ARALY (tr|D7LWQ4) Predicted protein OS=Arabidopsis lyrata... 106 7e-22
A1YMZ5_BRACM (tr|A1YMZ5) Putative uncharacterized protein OS=Bra... 105 2e-21
D7L3F0_ARALY (tr|D7L3F0) Predicted protein (Fragment) OS=Arabido... 103 6e-21
Q7XM27_ORYSJ (tr|Q7XM27) OSJNBa0084K01.4 protein OS=Oryza sativa... 101 2e-20
Q01JK5_ORYSA (tr|Q01JK5) H0112G12.15 protein OS=Oryza sativa GN=... 101 2e-20
A2XYK7_ORYSI (tr|A2XYK7) Putative uncharacterized protein OS=Ory... 101 2e-20
C5Y9M6_SORBI (tr|C5Y9M6) Putative uncharacterized protein Sb06g0... 100 8e-20
B4FZU0_MAIZE (tr|B4FZU0) Putative uncharacterized protein OS=Zea... 97 4e-19
B6TCP9_MAIZE (tr|B6TCP9) Cofactor required for Sp1 transcription... 97 6e-19
B6T5C1_MAIZE (tr|B6T5C1) Cofactor required for Sp1 transcription... 96 1e-18
C0HI28_MAIZE (tr|C0HI28) Putative uncharacterized protein OS=Zea... 96 2e-18
C6TFC0_SOYBN (tr|C6TFC0) Putative uncharacterized protein OS=Gly... 83 1e-14
A9TF60_PHYPA (tr|A9TF60) Predicted protein (Fragment) OS=Physcom... 60 1e-07
D3B080_POLPA (tr|D3B080) Putative mediator complex subunit 7 OS=... 56 1e-06
>B9T018_RICCO (tr|B9T018) Cofactor required for Sp1 transcriptional activation
subunit, putative OS=Ricinus communis GN=RCOM_0036740
PE=4 SV=1
Length = 168
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/60 (98%), Positives = 59/60 (98%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK RREEAQKLLKEALGTLDGQ
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQKLLKEALGTLDGQ 168
>D7TI87_VITVI (tr|D7TI87) Whole genome shotgun sequence of line PN40024,
scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00033427001 PE=4 SV=1
Length = 168
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK RREEAQ+LLKEA+GTL+GQ
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRLLKEAVGTLEGQ 168
>B9IIE0_POPTR (tr|B9IIE0) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_814436 PE=4 SV=1
Length = 168
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/60 (95%), Positives = 58/60 (96%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK +REEAQKLLKEALGTL GQ
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRQREEAQKLLKEALGTLAGQ 168
>D7M806_ARALY (tr|D7M806) Transcription coactivator OS=Arabidopsis lyrata subsp.
lyrata GN=ARALYDRAFT_349604 PE=4 SV=1
Length = 168
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 57/60 (95%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIHI+ELQIQRRKQAVEDIK RREEAQ+LLK+A TLDGQ
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHIMELQIQRRKQAVEDIKRRREEAQRLLKDAYVTLDGQ 168
>B0BLB1_LOTJA (tr|B0BLB1) CM0545.310.nc protein OS=Lotus japonicus
GN=CM0545.310.nc PE=4 SV=1
Length = 168
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 56/60 (93%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
+FKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK RREEA+ LLKEAL LDGQ
Sbjct: 109 VFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARSLLKEALTILDGQ 168
>Q9LYW3_ARATH (tr|Q9LYW3) AT5g03220 OS=Arabidopsis thaliana GN=F15A17_250 PE=1
SV=1
Length = 168
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/60 (88%), Positives = 57/60 (95%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIHI+ELQIQ+RKQAVEDIK RREEAQ+LLK+A TLDGQ
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQRLLKDAYLTLDGQ 168
>C6TKC3_SOYBN (tr|C6TKC3) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 168
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
+FKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK RREEA++LL E+L TLDG
Sbjct: 109 VFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKKRREEARRLLNESLATLDG 167
>Q8L8V0_ARATH (tr|Q8L8V0) Transcription co-activator-like protein OS=Arabidopsis
thaliana PE=2 SV=1
Length = 168
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/60 (88%), Positives = 57/60 (95%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIHI+ELQIQ+RKQAVEDIK RREEAQ+LLK+A TLDGQ
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQRLLKDAYLTLDGQ 168
>Q9LZD7_ARATH (tr|Q9LZD7) AT5G03500 protein OS=Arabidopsis thaliana GN=F12E4_270
PE=2 SV=1
Length = 168
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/60 (88%), Positives = 56/60 (93%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIHI+ELQIQ+RKQAVEDIK RREEAQ LLK+A TLDGQ
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQGLLKDAFVTLDGQ 168
>D7LWQ4_ARALY (tr|D7LWQ4) Predicted protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_660191 PE=4 SV=1
Length = 167
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIHI+ELQIQ+RKQAVEDIK RREEAQ+LLK+A TLDG
Sbjct: 109 IFKNLHHLLNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQRLLKDAFVTLDG 167
>A1YMZ5_BRACM (tr|A1YMZ5) Putative uncharacterized protein OS=Brassica campestris
PE=2 SV=1
Length = 168
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/60 (83%), Positives = 56/60 (93%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
+FKNLHHLLNSLRPHQARATLIH++ELQIQ+RKQAVEDIK RREE Q+LLK+A TLDGQ
Sbjct: 109 VFKNLHHLLNSLRPHQARATLIHVMELQIQQRKQAVEDIKRRREEVQRLLKDAFITLDGQ 168
>D7L3F0_ARALY (tr|D7L3F0) Predicted protein (Fragment) OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_673357 PE=4 SV=1
Length = 153
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/59 (86%), Positives = 55/59 (93%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIHI+ELQIQ+RKQAVEDIK RREEAQ+LLK+A LDG
Sbjct: 95 IFKNLHHLLNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQRLLKDAFVALDG 153
>Q7XM27_ORYSJ (tr|Q7XM27) OSJNBa0084K01.4 protein OS=Oryza sativa subsp. japonica
GN=OSJNBa0084K01.4 PE=2 SV=1
Length = 176
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/59 (86%), Positives = 54/59 (91%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIH+LE QIQRRKQA+EDIK RREEAQKLL E+L LDG
Sbjct: 110 IFKNLHHLLNSLRPHQARATLIHMLENQIQRRKQAIEDIKQRREEAQKLLGESLLILDG 168
>Q01JK5_ORYSA (tr|Q01JK5) H0112G12.15 protein OS=Oryza sativa GN=H0112G12.15 PE=4
SV=1
Length = 176
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/59 (86%), Positives = 54/59 (91%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIH+LE QIQRRKQA+EDIK RREEAQKLL E+L LDG
Sbjct: 110 IFKNLHHLLNSLRPHQARATLIHMLENQIQRRKQAIEDIKQRREEAQKLLGESLLILDG 168
>A2XYK7_ORYSI (tr|A2XYK7) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_17783 PE=4 SV=1
Length = 176
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/59 (86%), Positives = 54/59 (91%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIH+LE QIQRRKQA+EDIK RREEAQKLL E+L LDG
Sbjct: 110 IFKNLHHLLNSLRPHQARATLIHMLENQIQRRKQAIEDIKQRREEAQKLLGESLLILDG 168
>C5Y9M6_SORBI (tr|C5Y9M6) Putative uncharacterized protein Sb06g031690 OS=Sorghum
bicolor GN=Sb06g031690 PE=4 SV=1
Length = 174
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/59 (84%), Positives = 53/59 (89%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIH+LE QIQ RKQA+EDIK RREEAQKLL E+L LDG
Sbjct: 112 IFKNLHHLLNSLRPHQARATLIHMLESQIQHRKQAIEDIKQRREEAQKLLGESLHILDG 170
>B4FZU0_MAIZE (tr|B4FZU0) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 174
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 53/62 (85%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIH+LE QIQRRK+A+EDIK RR EAQKLL E+L LD
Sbjct: 112 IFKNLHHLLNSLRPHQARATLIHMLESQIQRRKEAIEDIKQRRVEAQKLLAESLHILDAS 171
Query: 61 SA 62
A
Sbjct: 172 QA 173
>B6TCP9_MAIZE (tr|B6TCP9) Cofactor required for Sp1 transcriptional activation
subunit 9 OS=Zea mays PE=2 SV=1
Length = 174
Score = 97.1 bits (240), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 53/62 (85%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
IFKNLHHLLNSLRPHQARATLIH+LE QIQRRK+A+EDIK RR EAQKLL E+L LD
Sbjct: 112 IFKNLHHLLNSLRPHQARATLIHMLESQIQRRKEAIEDIKQRRVEAQKLLGESLHILDAS 171
Query: 61 SA 62
A
Sbjct: 172 QA 173
>B6T5C1_MAIZE (tr|B6T5C1) Cofactor required for Sp1 transcriptional activation
subunit 9 OS=Zea mays PE=2 SV=1
Length = 174
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 53/59 (89%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIH+LE QI+ RK+A+EDIK RREEAQK+L E+L LDG
Sbjct: 112 IFKNLHHLLNSLRPHQARATLIHMLESQIRHRKEAIEDIKQRREEAQKMLGESLLILDG 170
>C0HI28_MAIZE (tr|C0HI28) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 174
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 53/59 (89%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDG 59
IFKNLHHLLNSLRPHQARATLIH+LE QI+ RK+A+EDIK RREEAQK+L E+L LDG
Sbjct: 112 IFKNLHHLLNSLRPHQARATLIHMLESQIRHRKEAIEDIKQRREEAQKVLGESLLILDG 170
>C6TFC0_SOYBN (tr|C6TFC0) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 161
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/40 (97%), Positives = 40/40 (100%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK 40
+FKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK
Sbjct: 109 VFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK 148
>A9TF60_PHYPA (tr|A9TF60) Predicted protein (Fragment) OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_8396 PE=4 SV=1
Length = 104
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 35/40 (87%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIK 40
I +N+HHLLNSLRPHQARAT+IH+LE Q+ RRK+A+ I+
Sbjct: 64 ILRNVHHLLNSLRPHQARATVIHMLEAQLIRRKEALAKIR 103
>D3B080_POLPA (tr|D3B080) Putative mediator complex subunit 7 OS=Polysphondylium
pallidum PN500 GN=med7 PE=4 SV=1
Length = 337
Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 1 IFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKGRREEAQKLLKEALGTLDGQ 60
+F N HHLLNS RPHQAR TLI I+ QI+++++++ I +++LK+ L T++ +
Sbjct: 183 LFVNFHHLLNSYRPHQARETLISIMTEQIKQKRESITKINNTINSCKEILKKTLQTVNTE 242