Jatropha Genome Database

JcCB0339681.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0339681.10 + phase: 0 /partial
         (180 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SU38_RICCO (tr|B9SU38) DNA binding protein, putative OS=Ricinu...   180   6e-44
B9H9T5_POPTR (tr|B9H9T5) AP2 domain-containing transcription fac...   151   3e-35
D7THW0_VITVI (tr|D7THW0) Whole genome shotgun sequence of line P...   146   9e-34
A5AIZ7_VITVI (tr|A5AIZ7) Putative uncharacterized protein OS=Vit...   145   1e-33
B9II84_POPTR (tr|B9II84) AP2 domain-containing transcription fac...   139   2e-31
D7LHA7_ARALY (tr|D7LHA7) Putative uncharacterized protein OS=Ara...   120   4e-26
Q60E56_ORYSJ (tr|Q60E56) Putative AP2 domain transcription facto...    69   3e-10
Q0DIH8_ORYSJ (tr|Q0DIH8) Os05g0389000 protein (Fragment) OS=Oryz...    68   4e-10
A2Y490_ORYSI (tr|A2Y490) Putative uncharacterized protein OS=Ory...    68   4e-10
B9FI25_ORYSJ (tr|B9FI25) Putative uncharacterized protein OS=Ory...    68   4e-10
B0FLX2_ORYSI (tr|B0FLX2) AP2/EREBP-like protein OS=Oryza sativa ...    68   4e-10
B8A329_MAIZE (tr|B8A329) Putative uncharacterized protein OS=Zea...    65   3e-09
B4FT20_MAIZE (tr|B4FT20) AP2 domain transcription factor OS=Zea ...    65   3e-09
C5YXG9_SORBI (tr|C5YXG9) Putative uncharacterized protein Sb09g0...    60   9e-08

>B9SU38_RICCO (tr|B9SU38) DNA binding protein, putative OS=Ricinus communis
           GN=RCOM_1215720 PE=4 SV=1
          Length = 440

 Score =  180 bits (456), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 93/136 (68%), Positives = 101/136 (74%), Gaps = 3/136 (2%)

Query: 46  AFQEEISKYHGLSSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERKIDLTS 105
            F   ISKY GLSSQWDSSF RMPGSEYF SINYGAADD A E++YVGSLCFERKIDLTS
Sbjct: 159 GFSRGISKYRGLSSQWDSSFGRMPGSEYFSSINYGAADDPAAESEYVGSLCFERKIDLTS 218

Query: 106 YIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMPIDGKS 164
           YI+WWG N+TR+            HGY ED+ ELK+SEWAVQ TE YQMP LGMP +GK 
Sbjct: 219 YIRWWGFNKTRE--SVSKSSDERKHGYGEDISELKSSEWAVQSTEPYQMPRLGMPDNGKK 276

Query: 165 TKGYAFSALSILSKSA 180
            K    SALSILS SA
Sbjct: 277 HKCSKISALSILSHSA 292


>B9H9T5_POPTR (tr|B9H9T5) AP2 domain-containing transcription factor OS=Populus
           trichocarpa GN=RAP31 PE=4 SV=1
          Length = 431

 Score =  151 bits (381), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/137 (58%), Positives = 95/137 (69%), Gaps = 4/137 (2%)

Query: 46  AFQEEISKYHGLSSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERKIDLTS 105
            F   ISKY  LSS+WDSS+SR+PGSEYF ++NYGA DD A E++Y  S C ERKIDLT 
Sbjct: 172 GFSRGISKYRALSSRWDSSYSRVPGSEYFSNVNYGAGDDQAAESEY--SFCIERKIDLTG 229

Query: 106 YIKWWGSNETRQXXXXXXXXXXXXHGYAEDVG-ELKTSEWAVQPTE-YQMPCLGMPIDGK 163
           YIKWWGSN+T              HG A+D+G ELKT+E  VQ TE YQMP LG+ ++GK
Sbjct: 230 YIKWWGSNKTSLAESMTKSSEDTKHGCADDIGSELKTTEREVQCTEPYQMPRLGLSVEGK 289

Query: 164 STKGYAFSALSILSKSA 180
             KG   SALSILS+SA
Sbjct: 290 RHKGSKISALSILSQSA 306


>D7THW0_VITVI (tr|D7THW0) Whole genome shotgun sequence of line PN40024,
           scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00033273001 PE=4 SV=1
          Length = 430

 Score =  146 bits (368), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 75/138 (54%), Positives = 89/138 (64%), Gaps = 3/138 (2%)

Query: 46  AFQEEISKYHGLSS-QWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERKIDLT 104
            F   ISKY GL+S +WD  F R+ G EYF +++YG  DD A E++  G  C ERKIDLT
Sbjct: 166 GFSRGISKYRGLASNRWDQPFGRIAGQEYFNNMHYGMGDDAAAESELFGGFCMERKIDLT 225

Query: 105 SYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVG-ELKTSEWAVQPTE-YQMPCLGMPIDG 162
            YIKWWG N+TRQ             G  ED+G ELKT EWA+QPTE YQMP LG+P +G
Sbjct: 226 GYIKWWGPNKTRQSDSLAKSSEETKQGSGEDIGSELKTLEWAIQPTEPYQMPRLGLPHEG 285

Query: 163 KSTKGYAFSALSILSKSA 180
           K  K    SALSILS+SA
Sbjct: 286 KKQKSSTVSALSILSRSA 303


>A5AIZ7_VITVI (tr|A5AIZ7) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_011870 PE=4 SV=1
          Length = 492

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 99/173 (57%), Gaps = 3/173 (1%)

Query: 11  FPLPSVRLLIIQETLKKCRMCQGRNTWHLFGERVVAFQEEISKYHGLSS-QWDSSFSRMP 69
           FP   V++      L++ +             +   F   ISKY GL+S +WD  F R+ 
Sbjct: 193 FPYGEVQVTDYARDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLASNRWDQPFGRIA 252

Query: 70  GSEYFISINYGAADDLALENDYVGSLCFERKIDLTSYIKWWGSNETRQXXXXXXXXXXXX 129
           G EYF +++YG  DD A E++  G  C ERKIDLT YIKWWG N+TRQ            
Sbjct: 253 GQEYFNNMHYGMGDDAAAESELFGGFCMERKIDLTGYIKWWGPNKTRQSDSLAKSSEETK 312

Query: 130 HGYAEDVG-ELKTSEWAVQPTE-YQMPCLGMPIDGKSTKGYAFSALSILSKSA 180
            G  ED+G ELKT EWA+QPTE YQMP LG+P +GK  K    SALSILS+SA
Sbjct: 313 QGSGEDIGSELKTLEWAIQPTEPYQMPRLGLPHEGKKQKSSTXSALSILSRSA 365


>B9II84_POPTR (tr|B9II84) AP2 domain-containing transcription factor OS=Populus
           trichocarpa GN=RAP30 PE=4 SV=1
          Length = 504

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/137 (55%), Positives = 90/137 (65%), Gaps = 4/137 (2%)

Query: 46  AFQEEISKYHGLSSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERKIDLTS 105
            F   +SKY  LSS+WDSS SRMPGSEY  S+NYG  DD A E++Y GS C ERKIDLT 
Sbjct: 244 GFSRGLSKYRALSSRWDSSCSRMPGSEYCSSVNYG--DDHAAESEYGGSFCIERKIDLTG 301

Query: 106 YIKWWGSNETRQXXXXXXXXXXXXHGYAEDVG-ELKTSEWAVQPTE-YQMPCLGMPIDGK 163
           YIKWW S+ TRQ            HG  +D+G ELKTSE  V+ T+ YQMP LG+ ++GK
Sbjct: 302 YIKWWNSHSTRQVESIMKSSEDTKHGCPDDIGSELKTSEREVKCTQPYQMPHLGLSVEGK 361

Query: 164 STKGYAFSALSILSKSA 180
                  SALSILS+SA
Sbjct: 362 GHTRSTISALSILSQSA 378


>D7LHA7_ARALY (tr|D7LHA7) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_483251 PE=4 SV=1
          Length = 431

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 74/121 (61%), Gaps = 5/121 (4%)

Query: 40  FGERVVAFQEEISKYHGLSSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFER 99
           FG +   F   I+KY GL S+WD+S SRMPG EYF +I+YGA DD   E D++GS C ER
Sbjct: 167 FGRKSSGFSRGIAKYRGLQSRWDASASRMPGPEYFSNIHYGAGDDRGTEGDFLGSFCLER 226

Query: 100 KIDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVG-ELKTSEWAVQPTE-YQMPCLG 157
           KIDLT YIKWWG N+TRQ                ED G ELKT E   Q TE Y+ P LG
Sbjct: 227 KIDLTGYIKWWGVNKTRQPESSSKASEDAN---VEDAGTELKTLEHTSQATEPYKAPNLG 283

Query: 158 M 158
           +
Sbjct: 284 V 284


>Q60E56_ORYSJ (tr|Q60E56) Putative AP2 domain transcription factor OS=Oryza
           sativa subsp. japonica GN=OSJNBa0073E05.20 PE=2 SV=1
          Length = 260

 Score = 68.6 bits (166), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 21/140 (15%)

Query: 46  AFQEEISKYHGL-----SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERK 100
           AF   + KY GL     +S+WD+S   + G++Y          D+ L+  + G+   ERK
Sbjct: 19  AFSRGLPKYRGLPRQLHNSRWDASLGHLLGNDYM-----SLGKDITLDGKFAGTFGLERK 73

Query: 101 IDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMP 159
           IDLT+YI+WW   +TRQ                E   E++  E ++Q TE Y+ P LG+ 
Sbjct: 74  IDLTNYIRWWLPKKTRQSDTSK---------MEEVTDEIRAIESSMQRTEPYKFPSLGLH 124

Query: 160 IDGKSTKGYAFSALSILSKS 179
            + K +     SA  ILS+S
Sbjct: 125 SNSKPS-SVVLSACDILSQS 143


>Q0DIH8_ORYSJ (tr|Q0DIH8) Os05g0389000 protein (Fragment) OS=Oryza sativa subsp.
           japonica GN=Os05g0389000 PE=4 SV=1
          Length = 300

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 21/140 (15%)

Query: 46  AFQEEISKYHGL-----SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERK 100
           AF   + KY GL     +S+WD+S   + G++Y          D+ L+  + G+   ERK
Sbjct: 59  AFSRGLPKYRGLPRQLHNSRWDASLGHLLGNDYM-----SLGKDITLDGKFAGTFGLERK 113

Query: 101 IDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMP 159
           IDLT+YI+WW   +TRQ                E   E++  E ++Q TE Y+ P LG+ 
Sbjct: 114 IDLTNYIRWWLPKKTRQSDTSKME---------EVTDEIRAIESSMQRTEPYKFPSLGLH 164

Query: 160 IDGKSTKGYAFSALSILSKS 179
            + K +     SA  ILS+S
Sbjct: 165 SNSKPS-SVVLSACDILSQS 183


>A2Y490_ORYSI (tr|A2Y490) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_19817 PE=4 SV=1
          Length = 348

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 21/140 (15%)

Query: 46  AFQEEISKYHGL-----SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERK 100
           AF   + KY GL     +S+WD+S   + G++Y          D+ L+  + G+   ERK
Sbjct: 104 AFSRGLPKYRGLPRQLHNSRWDASLGHLLGNDYM-----SLGKDITLDGKFAGTFGLERK 158

Query: 101 IDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMP 159
           IDLT+YI+WW   +TRQ                E   E++  E ++Q TE Y+ P LG+ 
Sbjct: 159 IDLTNYIRWWLPKKTRQSDTSKME---------EVTDEIRAIESSMQRTEPYKFPSLGLH 209

Query: 160 IDGKSTKGYAFSALSILSKS 179
            + K +     SA  ILS+S
Sbjct: 210 SNSKPS-SVVLSACDILSQS 228


>B9FI25_ORYSJ (tr|B9FI25) Putative uncharacterized protein OS=Oryza sativa subsp.
           japonica GN=OsJ_18407 PE=4 SV=1
          Length = 425

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 21/140 (15%)

Query: 46  AFQEEISKYHGL-----SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERK 100
           AF   + KY GL     +S+WD+S   + G++Y          D+ L+  + G+   ERK
Sbjct: 181 AFSRGLPKYRGLPRQLHNSRWDASLGHLLGNDYM-----SLGKDITLDGKFAGTFGLERK 235

Query: 101 IDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMP 159
           IDLT+YI+WW   +TRQ                E   E++  E ++Q TE Y+ P LG+ 
Sbjct: 236 IDLTNYIRWWLPKKTRQSDTSKME---------EVTDEIRAIESSMQRTEPYKFPSLGLH 286

Query: 160 IDGKSTKGYAFSALSILSKS 179
            + K +     SA  ILS+S
Sbjct: 287 SNSKPS-SVVLSACDILSQS 305


>B0FLX2_ORYSI (tr|B0FLX2) AP2/EREBP-like protein OS=Oryza sativa subsp. indica
           GN=AP2LP PE=2 SV=1
          Length = 348

 Score = 67.8 bits (164), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 21/140 (15%)

Query: 46  AFQEEISKYHGL-----SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERK 100
           AF   + KY GL     +S+WD+S   + G++Y          D+ L+  + G+   ERK
Sbjct: 107 AFSRGLPKYRGLPRQLHNSRWDASLGHLLGNDYM-----SLGKDITLDGKFAGTFGLERK 161

Query: 101 IDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMP 159
           IDLT+YI+WW   +TRQ                E   E++  E ++Q TE Y+ P LG+ 
Sbjct: 162 IDLTNYIRWWLPKKTRQSDTSKME---------EVTDEIRAIESSMQRTEPYKFPSLGLH 212

Query: 160 IDGKSTKGYAFSALSILSKS 179
            + K +     SA  ILS+S
Sbjct: 213 SNSKPS-SVVLSACDILSQS 231


>B8A329_MAIZE (tr|B8A329) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 412

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 21/140 (15%)

Query: 46  AFQEEISKYHGL-----SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERK 100
           AF   + KY GL     +S+WD+S     G++Y +S++ G   D+ L+  + GS   ERK
Sbjct: 170 AFYRGLPKYRGLLRQLHNSRWDTSLGL--GNDY-MSLSCG--KDIMLDGKFAGSFGLERK 224

Query: 101 IDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMP 159
           IDLT+YI+WW   +TRQ                E   E++  E ++Q TE Y++P LG  
Sbjct: 225 IDLTNYIRWWLPKKTRQSDTSKTE---------EIADEIRAIESSMQQTEPYKLPSLGFS 275

Query: 160 IDGKSTKGYAFSALSILSKS 179
              K +     SA SILS+S
Sbjct: 276 SPSKPS-SMGLSACSILSQS 294


>B4FT20_MAIZE (tr|B4FT20) AP2 domain transcription factor OS=Zea mays PE=2 SV=1
          Length = 412

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 73/140 (52%), Gaps = 21/140 (15%)

Query: 46  AFQEEISKYHGL-----SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERK 100
           AF   + KY GL     +S+WD+S     G++Y +S++ G   D+ L+  + GS   ERK
Sbjct: 170 AFYRGLPKYRGLLRQLHNSRWDTSLGL--GNDY-MSLSCG--KDIMLDGKFAGSFGLERK 224

Query: 101 IDLTSYIKWWGSNETRQXXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMP 159
           IDLT+YI+WW   +TRQ                E   E++  E ++Q TE Y++P LG  
Sbjct: 225 IDLTNYIRWWLPKKTRQSDTSKTE---------EIADEIRAIESSMQQTEPYKLPSLGFS 275

Query: 160 IDGKSTKGYAFSALSILSKS 179
              K +     SA SILS+S
Sbjct: 276 SPSKPS-SMGLSACSILSQS 294


>C5YXG9_SORBI (tr|C5YXG9) Putative uncharacterized protein Sb09g019190 OS=Sorghum
           bicolor GN=Sb09g019190 PE=4 SV=1
          Length = 393

 Score = 60.1 bits (144), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 67/123 (54%), Gaps = 16/123 (13%)

Query: 58  SSQWDSSFSRMPGSEYFISINYGAADDLALENDYVGSLCFERKIDLTSYIKWWGSNETRQ 117
           +S+WD+S     G++Y +S++ G   D+ L+  + GS   ERKIDLT+YI+WW   +TRQ
Sbjct: 171 NSRWDTSLGL--GNDY-MSLSCGK--DIMLDGKFAGSFGLERKIDLTNYIRWWLPKKTRQ 225

Query: 118 XXXXXXXXXXXXHGYAEDVGELKTSEWAVQPTE-YQMPCLGMPIDGKSTKGYAFSALSIL 176
                           E   E++  E ++Q TE Y++P LG+    K +     SA SIL
Sbjct: 226 SDTSKTE---------EIADEIRAIESSMQQTEPYKLPSLGLGSPSKPS-SVGLSACSIL 275

Query: 177 SKS 179
           S+S
Sbjct: 276 SQS 278