Jatropha Genome Database

JcCB0335101.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0335101.10 - phase: 0 /pseudo/partial
         (349 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RJX9_RICCO (tr|B9RJX9) DNA binding protein, putative OS=Ricinu...   226   4e-57
B9GN48_POPTR (tr|B9GN48) Predicted protein OS=Populus trichocarp...   130   2e-28
A5AHT3_VITVI (tr|A5AHT3) Putative uncharacterized protein OS=Vit...    91   2e-16

>B9RJX9_RICCO (tr|B9RJX9) DNA binding protein, putative OS=Ricinus communis
           GN=RCOM_1039610 PE=4 SV=1
          Length = 608

 Score =  226 bits (575), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/351 (44%), Positives = 197/351 (56%), Gaps = 28/351 (7%)

Query: 10  LKQRWAIIRKRQGTSNLGGNTSSVQLIEEQRAARHAMNMALDPPVKNTFTNS-SGETSSA 68
           L QRWAIIRKR G  N  GNTS VQL EE RAARHAMN+ALDPPVKN FTN+ SGE + A
Sbjct: 245 LSQRWAIIRKRHGNWNPVGNTSGVQLSEEWRAARHAMNLALDPPVKNKFTNNISGEATPA 304

Query: 69  QHRFQYPFATKSSVMGTLVPGAKPQVKMSNLVKPDIGSDLXXXXXXXXXXXXXTQSDXXX 128
           QH+ Q PFA KSS M  L    K Q+ +    KPD+ SD              TQSD   
Sbjct: 305 QHQSQRPFAAKSSPMVPLGSAPKSQIAVKRPAKPDLSSDPVRATAVAAGARIATQSDAAS 364

Query: 129 XXXXXXXXXXVHIMSSSGSSIKPALPAGSSGNPEAYPNVR-----AASLSTQAAASPSGA 183
                     VHIM + GSS+K ALP G+S + EA+PNV      A S ST    SPS  
Sbjct: 365 LLKAAQAKNAVHIMPTGGSSMKSALPGGASNHSEAHPNVHTNDLAAGSRSTLPVVSPSAI 424

Query: 184 HPALGKACLPTTQQAPSTSGAALNLLSEQANTELPPKQDSDNAKHVETLSKDV----AIE 239
            PA       T Q  PS S  A N+ ++Q N ELP ++D++ A  ++ LS+D       E
Sbjct: 425 RPAASS----TVQHIPSISDTAKNISAKQFNAELPARKDTETAGAIKILSEDAKEQQVKE 480

Query: 240 HG------------EEKSAVSQNQDAEVKTEV-DVEQSNASPNLEVAESDKMDVLENQAE 286
           HG            +E+ A   N++AE KT++   E S+A+  LE+A+S+ MDVL   AE
Sbjct: 481 HGACVSGNELSKQVQEEKAAFPNREAECKTQLAVSESSSAASKLEMADSNMMDVLGKPAE 540

Query: 287 PHQNSKSDSIKGLSIVKDENRSAIRENGNSQIISAKLADLPSMETDECSEK 337
             QNS S+ I  LS+  +++ SAI+ NG+ QI S K  D  SM  D+ SEK
Sbjct: 541 GSQNSNSNIITCLSVKTEDSMSAIQVNGDKQITSDK-PDRISMAIDKFSEK 590


>B9GN48_POPTR (tr|B9GN48) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_816395 PE=4 SV=1
          Length = 677

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 135/423 (31%), Positives = 185/423 (43%), Gaps = 92/423 (21%)

Query: 1   QFHGSHNFC-LKQRWAIIRKRQGTSNLGGNTSSVQLIEEQRAARHAMNMALD--PPVKNT 57
           +F G      L QRWAIIRKR G  N+G  +S+ QL E QRAAR A+ MALD  P  K+ 
Sbjct: 237 EFKGDRTASQLSQRWAIIRKRHGNLNVGTVSSAPQLSETQRAARDAVKMALDPHPAAKSL 296

Query: 58  FTNSSGETSS-----------------AQHRF-QYPFATKSSVMGTLVPGAKPQVKMSNL 99
             +S+G TS+                 AQH+  Q    TKSS +  + P AK QV ++  
Sbjct: 297 IASSAGTTSTKTPNNCASPTITAEASPAQHQSQQRTMMTKSSSIWPVGPAAKSQVMLAKA 356

Query: 100 VKPDI-GSDLXXXXXXXXXXXXXTQSDXXXXXXXXXXXXXVHIMSSSGSSIKPALPAGSS 158
            +  I  SD              TQSD             VHIM +  SSIK ++  G S
Sbjct: 357 SEKSILSSDPVRAAAVAAGARIATQSDAASLLKAAQAKNAVHIMPTGSSSIKSSMTGGIS 416

Query: 159 GNPEAYPNVRAASLSTQAAASP-------SGAHPALGKACLP---------TTQQAPSTS 202
            + +  PN R   +S+  A +P       SG  P L KA  P         T Q   ST 
Sbjct: 417 THLDVNPNTRF--ISSGMATAPTTTRPPASGPCPGLPKATSPPPQMKASSSTAQHTQSTP 474

Query: 203 GAALNLLSEQAN------TELPPKQDSDNAKHVETLS----------------------- 233
             + N  SEQ N      T LPP+  + +     TLS                       
Sbjct: 475 VTSFNAQSEQTNSVLAKATVLPPQMKASSMTTQNTLSTPITSSTPSEQTNAESSPKQGIV 534

Query: 234 --KD--------------------VAIEHGEEKSAVSQNQDAEVKTEV-DVEQSNASPNL 270
             KD                    V+ EH +E  A   NQ+AE+K++V  +E SN SP L
Sbjct: 535 TIKDTKAFGSQEVANGQVQRDGAHVSSEHVQEVKAALTNQEAELKSQVAALESSNGSPKL 594

Query: 271 EVAESDKMDVLENQAEPHQNSKSDSIKGLSIVKDENRSAIRENGNSQIISAKLADLPSME 330
            + ES  ++V  NQ +  QN+  + +    I + EN+SA++EN  +Q +S + ADLPS  
Sbjct: 595 IMNESGLVNVTGNQVDGSQNADDNKMTCSPIKEAENQSAVQENDENQSVSERQADLPSSV 654

Query: 331 TDE 333
           ++E
Sbjct: 655 SNE 657


>A5AHT3_VITVI (tr|A5AHT3) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_010188 PE=4 SV=1
          Length = 598

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 163/388 (42%), Gaps = 61/388 (15%)

Query: 10  LKQRWAIIRKRQGTSNLGG-NTSSVQLIEEQRAARHAMNMALDPPVKNTFTNSS------ 62
           L QRW IIRK+    N+GG N++  QL E Q AARHAM++ALD PVKN  T+SS      
Sbjct: 199 LSQRWTIIRKKHKNLNVGGANSNGSQLSEAQLAARHAMSLALDMPVKNLTTSSSIAGTNP 258

Query: 63  --------------------GETSSAQHRFQYPFATKSSVMGTL--VPGAKPQVKMSNLV 100
                                  S AQ   Q    +  S MG+L   P ++   K ++  
Sbjct: 259 NATSSNSAFPATPAEALPASTNISQAQQLSQQGPVSTLSQMGSLGSAPKSRATSKKTSAK 318

Query: 101 KPDIGSDLXXXXXXXXXXXXXTQSDXXXXXXXXXXXXXVHIMSSSGSSIKPALPAGSSGN 160
                  +             T S              VHIM    + IK ++  G++  
Sbjct: 319 STFSSQSMLKATAVAAGARIATPSAAASLLKDAQSRNAVHIMPGGSTLIKSSVAGGANPL 378

Query: 161 PE----AYPNVR-------AASLSTQAAASPSGAHPALGKACLPTTQQAPSTSGAALNLL 209
           P     A+PNV          SLST +A +PS +     K   P  Q APS S  ++N+ 
Sbjct: 379 PANHLGAHPNVHYKCAGPPTTSLSTYSAVAPSVSRTGSAKPAAPGGQLAPSPSATSVNIS 438

Query: 210 SEQAN-------TELPPKQDSDNAKHVET-LSKDV-AIEHGEEKSAVSQNQDAEVKTEVD 260
           SEQ N        E P KQ++  ++  +  +S +V   +  E+++ VS N  +E   E  
Sbjct: 439 SEQTNAATTSLAVEYPAKQETKTSEETKVPISGNVPKAKVLEDQACVSSNTASEQVQEDQ 498

Query: 261 VEQSNASPNLE-----VAESD---KMDVLENQAE--PHQNSKSDSIKGLSIVKD-ENRSA 309
              SN    LE     V+++    K +  EN  E    QN   + I    +  + EN+S 
Sbjct: 499 ATLSNTEVVLENKKAMVSDTKCLLKTETAENDGEVAESQNVNDNKIMDFRVAGECENQSV 558

Query: 310 IRENGNSQIISAKLADLPSMETDECSEK 337
             EN  +Q  + K  DLP+  TD C EK
Sbjct: 559 ANENSGNQNANEKQTDLPNTATD-CGEK 585