Jatropha Genome Database
- JcCB0333371.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0333371.10 + phase: 0 /short
(48 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9T1J4_RICCO (tr|B9T1J4) Acyl-CoA dehydrogenase, putative OS=Ric... 70 7e-11
B9IGB1_POPTR (tr|B9IGB1) Predicted protein OS=Populus trichocarp... 65 3e-09
D7SY23_VITVI (tr|D7SY23) Whole genome shotgun sequence of line P... 63 1e-08
D7LTZ0_ARALY (tr|D7LTZ0) Acyl-CoA oxidase 4 OS=Arabidopsis lyrat... 62 2e-08
B9HCY1_POPTR (tr|B9HCY1) Predicted protein OS=Populus trichocarp... 61 4e-08
A7Y7F6_SOYBN (tr|A7Y7F6) Acyl-CoA oxidase OS=Glycine max PE=2 SV=1 55 2e-06
B0M198_SOYBN (tr|B0M198) Peroxisomal acyl-CoA oxidase OS=Glycine... 55 2e-06
>B9T1J4_RICCO (tr|B9T1J4) Acyl-CoA dehydrogenase, putative OS=Ricinus communis
GN=RCOM_0186930 PE=3 SV=1
Length = 440
Score = 70.1 bits (170), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/37 (78%), Positives = 34/37 (91%)
Query: 9 DLEESAKSSYFNLPPLDVSVAFPQATPASIFPPCSKN 45
DL+ S KSSYFNLPPL+VS+AFPQATPASIFPPC+ +
Sbjct: 12 DLDHSQKSSYFNLPPLNVSIAFPQATPASIFPPCASD 48
>B9IGB1_POPTR (tr|B9IGB1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_735866 PE=3 SV=1
Length = 437
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/33 (81%), Positives = 32/33 (96%)
Query: 9 DLEESAKSSYFNLPPLDVSVAFPQATPASIFPP 41
++E++A+SSYFNLPPLDVSVAFPQATPAS FPP
Sbjct: 9 EVEQNARSSYFNLPPLDVSVAFPQATPASTFPP 41
>D7SY23_VITVI (tr|D7SY23) Whole genome shotgun sequence of line PN40024,
scaffold_105.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00011175001 PE=4 SV=1
Length = 446
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 31/37 (83%)
Query: 9 DLEESAKSSYFNLPPLDVSVAFPQATPASIFPPCSKN 45
D E++ K SYF LP LDVSVAFPQATPASIFPPC+ +
Sbjct: 18 DSEKAKKGSYFGLPSLDVSVAFPQATPASIFPPCASD 54
>D7LTZ0_ARALY (tr|D7LTZ0) Acyl-CoA oxidase 4 OS=Arabidopsis lyrata subsp.
lyrata GN=ACX4 PE=4 SV=1
Length = 436
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 32/38 (84%)
Query: 8 ADLEESAKSSYFNLPPLDVSVAFPQATPASIFPPCSKN 45
A E+ KSSYF+LPP+++SVAFPQATPAS FPPC+ +
Sbjct: 10 ASTEKKVKSSYFDLPPMEMSVAFPQATPASTFPPCTSD 47
>B9HCY1_POPTR (tr|B9HCY1) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_717426 PE=3 SV=1
Length = 436
Score = 60.8 bits (146), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/33 (75%), Positives = 30/33 (90%)
Query: 9 DLEESAKSSYFNLPPLDVSVAFPQATPASIFPP 41
++E++ +SSYFNLPPLDVSVAFPQATP S FPP
Sbjct: 9 EVEQNPRSSYFNLPPLDVSVAFPQATPVSTFPP 41
>A7Y7F6_SOYBN (tr|A7Y7F6) Acyl-CoA oxidase OS=Glycine max PE=2 SV=1
Length = 400
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 12 ESAKSSYFNLPPLDVSVAFPQATPASIFPPCSKN 45
++A SYF PPLDVS AFPQATPAS FPPC+ +
Sbjct: 14 QNAMPSYFYSPPLDVSAAFPQATPASTFPPCASD 47
>B0M198_SOYBN (tr|B0M198) Peroxisomal acyl-CoA oxidase OS=Glycine max PE=2 SV=1
Length = 437
Score = 55.1 bits (131), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 12 ESAKSSYFNLPPLDVSVAFPQATPASIFPPCSKN 45
++A SYF PPLDVS AFPQATPAS FPPC+ +
Sbjct: 14 QNAMPSYFYSPPLDVSAAFPQATPASTFPPCASD 47