Jatropha Genome Database

JcCB0316661.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0316661.10 + phase: 0 /partial
         (55 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S6U7_RICCO (tr|B9S6U7) Putative uncharacterized protein OS=Ric...    91   4e-17
B9NBJ9_POPTR (tr|B9NBJ9) Predicted protein OS=Populus trichocarp...    78   3e-13
D7U473_VITVI (tr|D7U473) Whole genome shotgun sequence of line P...    76   1e-12

>B9S6U7_RICCO (tr|B9S6U7) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0874210 PE=4 SV=1
          Length = 551

 Score = 90.9 bits (224), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/55 (78%), Positives = 47/55 (85%)

Query: 1   AQFDSISSTSMPDAKLDYGDVLDSAIKLFEKMYPNEEFFPETVSPEDSENDVGLS 55
            QFDSISSTSMPD  LDY DVLDSA KLF+KMYPNEEFFPET SPE SE+D G++
Sbjct: 494 GQFDSISSTSMPDGNLDYNDVLDSAKKLFQKMYPNEEFFPETKSPESSEHDAGVA 548


>B9NBJ9_POPTR (tr|B9NBJ9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_935569 PE=4 SV=1
          Length = 553

 Score = 78.2 bits (191), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/55 (61%), Positives = 45/55 (81%)

Query: 1   AQFDSISSTSMPDAKLDYGDVLDSAIKLFEKMYPNEEFFPETVSPEDSENDVGLS 55
            QFDSI+   MPD  L+Y D+LD+A+KLF++MYPNEE FPET  PE+SE+D+GL+
Sbjct: 496 GQFDSINFAPMPDGNLNYNDILDAALKLFQEMYPNEENFPETTPPENSEDDIGLT 550


>D7U473_VITVI (tr|D7U473) Whole genome shotgun sequence of line PN40024,
           scaffold_44.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00026648001 PE=4 SV=1
          Length = 556

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/53 (66%), Positives = 43/53 (81%)

Query: 3   FDSISSTSMPDAKLDYGDVLDSAIKLFEKMYPNEEFFPETVSPEDSENDVGLS 55
           F+SISSTSMPD  L+Y  +LD+ +KLF +MYP EEFFPET SPE+ E+D GLS
Sbjct: 501 FESISSTSMPDGNLNYNVLLDATVKLFHQMYPQEEFFPETTSPENVEDDDGLS 553