Jatropha Genome Database

JcCB0304451.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0304451.10 - phase: 1 /partial/short
         (47 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D2WL39_BETVU (tr|D2WL39) 6,7-dimethyl-8-ribityllumazine synthase...    60   8e-08
B9SZV2_RICCO (tr|B9SZV2) 6,7-dimethyl-8-ribityllumazine synthase...    60   1e-07
D7T2N4_VITVI (tr|D7T2N4) Whole genome shotgun sequence of line P...    58   3e-07
D7LKV3_ARALY (tr|D7LKV3) Putative uncharacterized protein OS=Ara...    57   5e-07
B9N8M6_POPTR (tr|B9N8M6) 6,7-dimethyl-8-ribityllumazine synthase...    57   9e-07
Q7XUK6_ORYSJ (tr|Q7XUK6) 6,7-dimethyl-8-ribityllumazine synthase...    57   9e-07
Q01IC6_ORYSA (tr|Q01IC6) 6,7-dimethyl-8-ribityllumazine synthase...    57   9e-07
A2XV50_ORYSI (tr|A2XV50) 6,7-dimethyl-8-ribityllumazine synthase...    57   9e-07
B9HGA8_POPTR (tr|B9HGA8) 6,7-dimethyl-8-ribityllumazine synthase...    56   1e-06

>D2WL39_BETVU (tr|D2WL39) 6,7-dimethyl-8-ribityllumazine synthase OS=Beta
           vulgaris PE=2 SV=1
          Length = 224

 Score = 60.1 bits (144), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/47 (61%), Positives = 29/47 (61%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHLK 47
           VPCIFGVLTCDDMDQ                  TAIEMASLFEHHLK
Sbjct: 177 VPCIFGVLTCDDMDQAINRAGGKVGNKGSEAALTAIEMASLFEHHLK 223


>B9SZV2_RICCO (tr|B9SZV2) 6,7-dimethyl-8-ribityllumazine synthase OS=Ricinus
           communis GN=RCOM_0292340 PE=3 SV=1
          Length = 221

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/47 (61%), Positives = 29/47 (61%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHLK 47
           VPCIFGVLTCDDMDQ                  TAIEMASLFEHHLK
Sbjct: 175 VPCIFGVLTCDDMDQALNRAGGKAGNKGAEGALTAIEMASLFEHHLK 221


>D7T2N4_VITVI (tr|D7T2N4) Whole genome shotgun sequence of line PN40024,
           scaffold_94.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00038261001 PE=4 SV=1
          Length = 181

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/46 (60%), Positives = 28/46 (60%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHL 46
           VPCIFGVLTCDDMDQ                  TAIEMASLFEHHL
Sbjct: 134 VPCIFGVLTCDDMDQALNRSGGKSGNKGAEAALTAIEMASLFEHHL 179


>D7LKV3_ARALY (tr|D7LKV3) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_903810 PE=4 SV=1
          Length = 227

 Score = 57.4 bits (137), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 29/47 (61%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHLK 47
           VPCIFGVLTC+DMDQ                  TA+EMASLFEHHLK
Sbjct: 181 VPCIFGVLTCEDMDQALNRSGGKAGNKGSETALTALEMASLFEHHLK 227


>B9N8M6_POPTR (tr|B9N8M6) 6,7-dimethyl-8-ribityllumazine synthase OS=Populus
           trichocarpa GN=POPTRDRAFT_585046 PE=3 SV=1
          Length = 221

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 29/47 (61%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHLK 47
           VPCIFGVLTC+DM+Q                  TAIEMASLFEHHLK
Sbjct: 175 VPCIFGVLTCEDMEQAINRAGGKSGNKGAEAALTAIEMASLFEHHLK 221


>Q7XUK6_ORYSJ (tr|Q7XUK6) 6,7-dimethyl-8-ribityllumazine synthase OS=Oryza sativa
           subsp. japonica GN=OSJNBa0067K08.17 PE=2 SV=2
          Length = 221

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 28/46 (60%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHL 46
           +PCIFGVLTCDDMDQ                  TAIEMASLF+HHL
Sbjct: 175 IPCIFGVLTCDDMDQALNRAGGKAGNKGAEAALTAIEMASLFQHHL 220


>Q01IC6_ORYSA (tr|Q01IC6) 6,7-dimethyl-8-ribityllumazine synthase OS=Oryza sativa
           GN=OSIGBa0092E01.9 PE=3 SV=1
          Length = 221

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 28/46 (60%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHL 46
           +PCIFGVLTCDDMDQ                  TAIEMASLF+HHL
Sbjct: 175 IPCIFGVLTCDDMDQALNRAGGKAGNKGAEAALTAIEMASLFQHHL 220


>A2XV50_ORYSI (tr|A2XV50) 6,7-dimethyl-8-ribityllumazine synthase OS=Oryza sativa
           subsp. indica GN=OsI_16488 PE=3 SV=1
          Length = 221

 Score = 56.6 bits (135), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/46 (56%), Positives = 28/46 (60%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHL 46
           +PCIFGVLTCDDMDQ                  TAIEMASLF+HHL
Sbjct: 175 IPCIFGVLTCDDMDQALNRAGGKAGNKGAEAALTAIEMASLFQHHL 220


>B9HGA8_POPTR (tr|B9HGA8) 6,7-dimethyl-8-ribityllumazine synthase (Fragment)
           OS=Populus trichocarpa GN=POPTRDRAFT_216020 PE=3 SV=1
          Length = 180

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/47 (55%), Positives = 29/47 (61%)

Query: 1   VPCIFGVLTCDDMDQXXXXXXXXXXXXXXXXXXTAIEMASLFEHHLK 47
           VPC+FGVLTC+DM+Q                  TAIEMASLFEHHLK
Sbjct: 134 VPCVFGVLTCEDMEQAINRAGGKSGNKGAEAALTAIEMASLFEHHLK 180