Jatropha Genome Database

JcCB0297551.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0297551.10 - phase: 0 /partial
         (52 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SH99_RICCO (tr|B9SH99) Nucleoredoxin, putative OS=Ricinus comm...    62   3e-08
Q5DMW9_CUCME (tr|Q5DMW9) Protein disulfide isomerase (PDI)-like ...    59   2e-07
B9HT83_POPTR (tr|B9HT83) Predicted protein (Fragment) OS=Populus...    58   3e-07
B9HT82_POPTR (tr|B9HT82) Predicted protein (Fragment) OS=Populus...    58   3e-07
B9HSZ5_POPTR (tr|B9HSZ5) Predicted protein OS=Populus trichocarp...    58   3e-07
Q5DMX0_CUCME (tr|Q5DMX0) Protein disulfide isomerase (PDI)-like ...    57   6e-07
B9HSZ4_POPTR (tr|B9HSZ4) Predicted protein OS=Populus trichocarp...    57   6e-07
Q8GTC2_QUESU (tr|Q8GTC2) PDI-like protein OS=Quercus suber GN=pd...    56   1e-06
Q6QUQ2_QUESU (tr|Q6QUQ2) Protein disulfide isomerase OS=Quercus ...    56   1e-06

>B9SH99_RICCO (tr|B9SH99) Nucleoredoxin, putative OS=Ricinus communis
          GN=RCOM_0528050 PE=4 SV=1
          Length = 553

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/29 (86%), Positives = 29/29 (100%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          F+IRSNGDQ++IS+LVGKIVGLYFSGSWC
Sbjct: 24 FLIRSNGDQVKISNLVGKIVGLYFSGSWC 52


>Q5DMW9_CUCME (tr|Q5DMW9) Protein disulfide isomerase (PDI)-like protein 3
          OS=Cucumis melo GN=PDI3 PE=4 SV=1
          Length = 561

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/29 (79%), Positives = 28/29 (96%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          F+IR+NGDQ++ISSL+GKIVGLYFS SWC
Sbjct: 20 FLIRNNGDQVKISSLIGKIVGLYFSASWC 48


>B9HT83_POPTR (tr|B9HT83) Predicted protein (Fragment) OS=Populus trichocarpa
          GN=POPTRDRAFT_230120 PE=4 SV=1
          Length = 555

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/29 (75%), Positives = 28/29 (96%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          F+IR+NGDQ+++S+LVGKIVG YFSGSWC
Sbjct: 12 FLIRNNGDQVKVSNLVGKIVGFYFSGSWC 40


>B9HT82_POPTR (tr|B9HT82) Predicted protein (Fragment) OS=Populus trichocarpa
          GN=POPTRDRAFT_230112 PE=4 SV=1
          Length = 462

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/29 (75%), Positives = 28/29 (96%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          F+IR+NGDQ+++S+LVGKIVG YFSGSWC
Sbjct: 18 FLIRNNGDQVKVSNLVGKIVGFYFSGSWC 46


>B9HSZ5_POPTR (tr|B9HSZ5) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_565873 PE=4 SV=1
          Length = 501

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/29 (75%), Positives = 28/29 (96%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          F+IR+NGDQ+++S+LVGKIVG YFSGSWC
Sbjct: 21 FLIRNNGDQVKVSNLVGKIVGFYFSGSWC 49


>Q5DMX0_CUCME (tr|Q5DMX0) Protein disulfide isomerase (PDI)-like protein 2
          OS=Cucumis melo GN=PDI2 PE=4 SV=1
          Length = 563

 Score = 57.0 bits (136), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/29 (79%), Positives = 27/29 (93%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          F+IRSNGDQ++ISSL+GK VGLYFS SWC
Sbjct: 20 FLIRSNGDQVKISSLIGKNVGLYFSASWC 48


>B9HSZ4_POPTR (tr|B9HSZ4) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_1089618 PE=4 SV=1
          Length = 564

 Score = 57.0 bits (136), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/28 (78%), Positives = 27/28 (96%)

Query: 25 VIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          +IR+NGDQ+R+S+LVGKIVG YFSGSWC
Sbjct: 22 LIRNNGDQVRVSNLVGKIVGFYFSGSWC 49


>Q8GTC2_QUESU (tr|Q8GTC2) PDI-like protein OS=Quercus suber GN=pdiqs PE=2 SV=1
          Length = 506

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/29 (68%), Positives = 28/29 (96%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          +++R+NGDQ++IS+L+GK VGLYFSGSWC
Sbjct: 24 YLVRNNGDQVKISNLIGKTVGLYFSGSWC 52


>Q6QUQ2_QUESU (tr|Q6QUQ2) Protein disulfide isomerase OS=Quercus suber GN=PDI
          PE=4 SV=1
          Length = 506

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/29 (68%), Positives = 28/29 (96%)

Query: 24 FVIRSNGDQIRISSLVGKIVGLYFSGSWC 52
          +++R+NGDQ++IS+L+GK VGLYFSGSWC
Sbjct: 24 YLVRNNGDQVKISNLIGKTVGLYFSGSWC 52