Jatropha Genome Database

JcCB0294291.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0294291.10 - phase: 0 /partial
         (171 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RIG8_RICCO (tr|B9RIG8) Thump domain protein, putative OS=Ricin...   154   2e-36
B9HP06_POPTR (tr|B9HP06) Predicted protein OS=Populus trichocarp...   145   1e-33
B9GI37_POPTR (tr|B9GI37) Predicted protein OS=Populus trichocarp...   145   1e-33
D7SNG3_VITVI (tr|D7SNG3) Whole genome shotgun sequence of line P...   124   4e-27
A5BHQ4_VITVI (tr|A5BHQ4) Putative uncharacterized protein OS=Vit...    79   2e-13
C6TM85_SOYBN (tr|C6TM85) Putative uncharacterized protein OS=Gly...    77   6e-13
Q56XG1_ARATH (tr|Q56XG1) Putative uncharacterized protein At5g12...    76   1e-12
Q94CK1_ARATH (tr|Q94CK1) At5g12410 OS=Arabidopsis thaliana GN=At...    75   2e-12
D7M518_ARALY (tr|D7M518) THUMP domain-containing protein OS=Arab...    61   5e-08
B6T443_MAIZE (tr|B6T443) THUMP domain containing protein OS=Zea ...    60   1e-07

>B9RIG8_RICCO (tr|B9RIG8) Thump domain protein, putative OS=Ricinus communis
           GN=RCOM_1578940 PE=4 SV=1
          Length = 382

 Score =  154 bits (390), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/171 (56%), Positives = 113/171 (66%), Gaps = 4/171 (2%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           FYEELVH KDTSV L ELP KP +KKIKFVYS                            
Sbjct: 66  FYEELVHAKDTSVKL-ELPKKPSSKKIKFVYSDDEEDDDDNGVEGEEEEEDKEEDKEEGN 124

Query: 61  XXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDLENPTSEAKEP 120
             KSD  QN+D K++ P NEKL FPNV+ TC  NQ E+ T D+E  G D E+ T+E  EP
Sbjct: 125 --KSDTKQNNDDKNDNPANEKLEFPNVDKTCNGNQTEKNTCDNEAGGKD-EHQTNETDEP 181

Query: 121 PAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
           PAKKQ ++TCVS S +HEK+E++S+DKLIEDELKELGDKSKRRF NLDSGC
Sbjct: 182 PAKKQIIETCVSSSVVHEKVEQRSIDKLIEDELKELGDKSKRRFTNLDSGC 232


>B9HP06_POPTR (tr|B9HP06) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_1088041 PE=4 SV=1
          Length = 378

 Score =  145 bits (366), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/171 (49%), Positives = 106/171 (61%), Gaps = 12/171 (7%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           FYEEL +GKDTSV LA+ P+KP NKKIKF YS                            
Sbjct: 69  FYEELAYGKDTSVKLADFPDKPTNKKIKFSYSDDEGDGEEDDDEEDGEDEN--------- 119

Query: 61  XXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDLENPTSEAKEP 120
             KS+  + +DA ++ PT++K+  P VEN    NQ EEKT   E   ND E   +EA+ P
Sbjct: 120 --KSEAPEGNDAMNDNPTDKKVGSPTVENENSENQTEEKTNQEEGCKND-EKQANEAEGP 176

Query: 121 PAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
           PAKK+C +TC  K+ + EK+EEKS+D+LIEDELKELGDK+KRRF +LDSGC
Sbjct: 177 PAKKKCTETCAPKTVVQEKVEEKSIDRLIEDELKELGDKNKRRFLSLDSGC 227


>B9GI37_POPTR (tr|B9GI37) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_549036 PE=4 SV=1
          Length = 379

 Score =  145 bits (366), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/171 (52%), Positives = 104/171 (60%), Gaps = 10/171 (5%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           FYEELV GKDTSV LAELPNKP+NKKIKF YS                            
Sbjct: 69  FYEELVFGKDTSVKLAELPNKPINKKIKFSYSDVEGDDDEEKEEDEEDGLDEN------- 121

Query: 61  XXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDLENPTSEAKEP 120
             KS   + +DAK+E P +EKL  P +EN     QR EKT   E   ND +   SEA+E 
Sbjct: 122 --KSGAPEANDAKNENPADEKLGSPCLENESSECQRREKTNQEEGCKND-KKQESEAEEL 178

Query: 121 PAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
           PAKK+C +TC  KS   EK+EEKS+DKLIEDELKELGDK+KR F +LDSGC
Sbjct: 179 PAKKKCTETCAPKSVGQEKVEEKSIDKLIEDELKELGDKNKRHFLSLDSGC 229


>D7SNG3_VITVI (tr|D7SNG3) Whole genome shotgun sequence of line PN40024,
           scaffold_61.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00031548001 PE=4 SV=1
          Length = 392

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 103/189 (54%), Gaps = 32/189 (16%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           F+EELVHGKD+ V L+ LPNKP+NKKIKF YS                            
Sbjct: 68  FFEELVHGKDSGVKLSMLPNKPMNKKIKFSYS--------------DSGSDDDDDDIDDE 113

Query: 61  XXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGND----------- 109
             KSD+++  DA  E P+NEK      ++ C  NQ +EK  D    GN+           
Sbjct: 114 EDKSDLHREKDANDENPSNEKSHPQKNDDVCRENQNKEKADDKTQDGNENQENDADGEKA 173

Query: 110 -------LENPTSEAKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKR 162
                   EN   +A+EP AKKQCL+T  S   IHEK EEKS+DKLIE EL+ELGD++KR
Sbjct: 174 DKNTEDGNENQEVDAEEPSAKKQCLETDASTHIIHEKTEEKSIDKLIEAELQELGDRNKR 233

Query: 163 RFANLDSGC 171
           RF NLDSGC
Sbjct: 234 RFGNLDSGC 242


>A5BHQ4_VITVI (tr|A5BHQ4) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_003478 PE=4 SV=1
          Length = 298

 Score = 78.6 bits (192), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 69/123 (56%), Gaps = 20/123 (16%)

Query: 63  KSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDL------------ 110
           KSD+++  DA  E P+NEK      ++ C  NQ +EK  D    GN+             
Sbjct: 109 KSDLHREKDANDENPSNEKSHPQKNDDVCRENQNKEKADDKTQDGNENQENDADGEKADK 168

Query: 111 ------ENPTSEAKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRF 164
                 EN   +A+EP AKKQCL+T  S   IHEK EEKS+DKLIE EL+ELGD++K  F
Sbjct: 169 NTEDGNENQEVDAEEPSAKKQCLETDASTHIIHEKTEEKSIDKLIEAELQELGDRNK--F 226

Query: 165 ANL 167
           A L
Sbjct: 227 AVL 229


>C6TM85_SOYBN (tr|C6TM85) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 377

 Score = 77.0 bits (188), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 82/175 (46%), Gaps = 13/175 (7%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           FYEELV G+ +SV   ELP+KPLNKKI F  S                            
Sbjct: 61  FYEELVDGEHSSV--KELPSKPLNKKITFADSDSSSSDDDDDDEEEEEVQEGDEEKGDKK 118

Query: 61  ----XXKSDVNQNSDAKSEVPTNEKLSFPNVENTCGANQREEKTKDSEDSGNDLENPTSE 116
                   D   + D   E     K+  P+        Q  ++T D++ + ++L+     
Sbjct: 119 PKLDTSNDDNTSHDDGVPEKSDPHKVDEPH-------TQEVDETCDNKGANDNLKTTKGT 171

Query: 117 AKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
           A   PA KQC  T V      +K+E+KS+DKLIE+E KELGDK+KR F  LDSGC
Sbjct: 172 ADGLPAVKQCCKTNVPACNFSDKVEQKSIDKLIEEEFKELGDKNKRCFVKLDSGC 226


>Q56XG1_ARATH (tr|Q56XG1) Putative uncharacterized protein At5g12410
           OS=Arabidopsis thaliana GN=At5g12410 PE=2 SV=1
          Length = 257

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 82/175 (46%), Gaps = 11/175 (6%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           F+EEL+ G D+ V+     N P+NKK+ F YS                            
Sbjct: 59  FFEELIQGTDSKVNPGLFGN-PINKKVTFSYSEDEDEEEDESNNGEEEENKGDGDKAVVS 117

Query: 61  XXKSDVNQNSDAKSEVPTNEKLSFPNV--ENTCGANQ--REEKTKDSEDSGNDLENPTSE 116
              +D+    +  SE   N++++   +  E +C   Q    E  K+ ED GN      + 
Sbjct: 118 EGGNDLVNEKEIASE-GVNDQVNEKEIASEGSCEVKQLAENETVKEEEDKGNQ----KNG 172

Query: 117 AKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
             EPP KK C +     + ++E  E KS+DKLIE ELKELGDKSKRRF  LD GC
Sbjct: 173 GDEPPRKKTCTEEANPLAKVNENAE-KSIDKLIEAELKELGDKSKRRFMKLDPGC 226


>Q94CK1_ARATH (tr|Q94CK1) At5g12410 OS=Arabidopsis thaliana GN=At5g12410 PE=2
           SV=1
          Length = 376

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 82/175 (46%), Gaps = 11/175 (6%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           F+EEL+ G D+ V+     N P+NKK+ F YS                            
Sbjct: 59  FFEELIQGTDSKVNPGLFGN-PINKKVTFSYSEDEDEEEDESNNGEEEENKGDGDKAVVS 117

Query: 61  XXKSDVNQNSDAKSEVPTNEKLSFPNV--ENTCGANQ--REEKTKDSEDSGNDLENPTSE 116
              +D+    +  SE   N++++   +  E +C   Q    E  K+ ED GN      + 
Sbjct: 118 EGGNDLVNEKEIASE-GVNDQVNEKEIASEGSCEVKQLAENETVKEEEDKGNQ----KNG 172

Query: 117 AKEPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
             EPP KK C +     + ++E  E KS+DKLIE ELKELGDKSKRRF  LD GC
Sbjct: 173 GDEPPRKKTCTEEANPLAKVNENAE-KSIDKLIEAELKELGDKSKRRFMKLDPGC 226


>D7M518_ARALY (tr|D7M518) THUMP domain-containing protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_488088 PE=4 SV=1
          Length = 362

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 1/53 (1%)

Query: 119 EPPAKKQCLDTCVSKSTIHEKMEEKSVDKLIEDELKELGDKSKRRFANLDSGC 171
           EPP KK C +     + ++E  E KS+DKLIE ELKELGDKSKRRF  LD GC
Sbjct: 161 EPPRKKTCTEEANPLAKVNENAE-KSIDKLIEAELKELGDKSKRRFMKLDPGC 212


>B6T443_MAIZE (tr|B6T443) THUMP domain containing protein OS=Zea mays PE=2 SV=1
          Length = 396

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 82/189 (43%), Gaps = 30/189 (15%)

Query: 1   FYEELVHGKDTSVDLAELPNKPLNKKIKFVYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           FYE+LV GK +      +P KPLNKKIKF  S                            
Sbjct: 67  FYEDLVDGKGSDEKPKNIPEKPLNKKIKFEDSDSSDDEDEDNSGEEADNGNV-------- 118

Query: 61  XXKSDVNQNSDAKSEVPTNEKLSFPNV---ENTCGANQREEKTKDSEDSGNDLENPTSEA 117
              +DV +   A SE    E L   N    +NT  + ++EE    S+    D E     A
Sbjct: 119 ---NDVEKGETAPSE-KQQEVLDTSNTASKDNTALSEKKEEVLDTSDTVSKDNEEQAVTA 174

Query: 118 KEPPAKKQ------CLDTCVSKSTIHEKME---------EKSVDKLIEDELKELGDKSKR 162
            EP  KKQ        +  V K T  E  E         EK++D LI+++LKE+GD+ KR
Sbjct: 175 DEPREKKQRVEDPPVFEQAVQKETADEPKESTDKPKESSEKNIDDLIDEDLKEIGDRKKR 234

Query: 163 RFANLDSGC 171
            FA+L++GC
Sbjct: 235 LFASLETGC 243