Jatropha Genome Database
- JcCB0291291.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0291291.10 + phase: 2 /TE/partial
(56 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A4GVD3_TOBAC (tr|A4GVD3) Polyprotein (Fragment) OS=Nicotiana tab... 74 7e-12
Q0ZCC2_POPTR (tr|Q0ZCC2) CCHC-type integrase OS=Populus trichoca... 70 1e-10
Q94FM1_CITPA (tr|Q94FM1) Pol polyprotein OS=Citrus paradisi GN=p... 64 6e-09
A5AHY2_VITVI (tr|A5AHY2) Putative uncharacterized protein OS=Vit... 61 3e-08
A5ACQ7_VITVI (tr|A5ACQ7) Putative uncharacterized protein OS=Vit... 59 1e-07
A5AMB7_VITVI (tr|A5AMB7) Putative uncharacterized protein OS=Vit... 59 2e-07
A5BZR8_VITVI (tr|A5BZR8) Putative uncharacterized protein OS=Vit... 58 3e-07
A5AQ94_VITVI (tr|A5AQ94) Putative uncharacterized protein OS=Vit... 57 6e-07
A5BT02_VITVI (tr|A5BT02) Putative uncharacterized protein OS=Vit... 57 7e-07
Q7X670_ORYSJ (tr|Q7X670) OSJNBa0093P23.9 protein OS=Oryza sativa... 54 5e-06
Q01MJ3_ORYSA (tr|Q01MJ3) OSIGBa0105O19.1 protein OS=Oryza sativa... 54 6e-06
A5AKC5_VITVI (tr|A5AKC5) Putative uncharacterized protein OS=Vit... 54 7e-06
A5BMJ8_VITVI (tr|A5BMJ8) Putative uncharacterized protein OS=Vit... 54 8e-06
A5C0Q1_VITVI (tr|A5C0Q1) Putative uncharacterized protein OS=Vit... 53 9e-06
>A4GVD3_TOBAC (tr|A4GVD3) Polyprotein (Fragment) OS=Nicotiana tabacum PE=4 SV=1
Length = 57
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLINTVE 55
TKHIDV YHFVR I+EEG + ++KI T+N DM+ K VI V+F+HCLDLIN VE
Sbjct: 2 TKHIDVRYHFVREIIEEGGVTVKKIHTTENPADMLTKVVIAVKFQHCLDLINIVE 56
>Q0ZCC2_POPTR (tr|Q0ZCC2) CCHC-type integrase OS=Populus trichocarpa PE=2 SV=1
Length = 353
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDL 50
TKHIDV +HFVR I++EGDILLQKI N DM+ K V ++F+HCLDL
Sbjct: 49 TKHIDVRFHFVREIVDEGDILLQKIGTADNPADMLTKCVSGIKFQHCLDL 98
>Q94FM1_CITPA (tr|Q94FM1) Pol polyprotein OS=Citrus paradisi GN=pol PE=4 SV=1
Length = 297
Score = 63.5 bits (153), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLINTV 54
TKHIDV YH+VR I+E GD+LL+KI N DM+ K V V+F+HCL LI +
Sbjct: 241 TKHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQIL 294
>A5AHY2_VITVI (tr|A5AHY2) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_000082 PE=4 SV=1
Length = 190
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLIN 52
TKHIDV +H +R ++ G++LL+K+ +KN+ DM+ K + T +FKHCL+L+N
Sbjct: 135 TKHIDVRFHKIRELVSSGELLLEKVHTSKNATDMLTKPITTEKFKHCLNLVN 186
>A5ACQ7_VITVI (tr|A5ACQ7) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_017097 PE=4 SV=1
Length = 815
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLIN 52
TKHIDV +H +R ++ G++LL+K+ ++N+ +M+ K + T +FKHCL+LIN
Sbjct: 760 TKHIDVRFHNIRELVSSGELLLEKVHTSENAANMLRKPITTKKFKHCLNLIN 811
>A5AMB7_VITVI (tr|A5AMB7) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_029025 PE=4 SV=1
Length = 406
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLI 51
TKHIDV YHFVR I+ GDI++ + N +DMM K + +F+HCLDL+
Sbjct: 323 TKHIDVRYHFVRDIIARGDIVVGNVSTHDNHVDMMTKTLPIAKFRHCLDLV 373
>A5BZR8_VITVI (tr|A5BZR8) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_041980 PE=4 SV=1
Length = 367
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLIN 52
TKHIDV +H + ++ G++LL+K+ ++N+ DM+ K V T +FKHCL+LIN
Sbjct: 312 TKHIDVRFHKISELVSSGELLLEKVHTSENAADMLTKPVTTKKFKHCLNLIN 363
>A5AQ94_VITVI (tr|A5AQ94) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_017821 PE=4 SV=1
Length = 939
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLIN 52
TKHIDV +HF+R I E+G + + KI N DM+ K + V+FK CL+LIN
Sbjct: 884 TKHIDVRFHFIRDIAEQGLVNVSKISTKDNPADMLTKPISKVKFKQCLNLIN 935
>A5BT02_VITVI (tr|A5BT02) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_020397 PE=4 SV=1
Length = 215
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLIN 52
TKHIDV +H ++ ++ G++LL+K+ ++N+ DM+ K V +FKHCL+LIN
Sbjct: 160 TKHIDVRFHKIKELVSSGELLLEKVHTSENAADMLTKPVTIEKFKHCLNLIN 211
>Q7X670_ORYSJ (tr|Q7X670) OSJNBa0093P23.9 protein OS=Oryza sativa subsp. japonica
GN=OSJNBa0093P23.9 PE=4 SV=2
Length = 944
Score = 53.9 bits (128), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLI 51
TKHIDV YHF+R ++ EGD+ + KI N DMM+KAV +F+ C L+
Sbjct: 890 TKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMIKAVPATKFELCSSLV 940
>Q01MJ3_ORYSA (tr|Q01MJ3) OSIGBa0105O19.1 protein OS=Oryza sativa
GN=OSIGBa0105O19.1 PE=4 SV=1
Length = 944
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLI 51
TKHIDV YHF+R ++ EGD+ + KI N DMM+KAV +F+ C L+
Sbjct: 890 TKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMIKAVPATKFELCSSLV 940
>A5AKC5_VITVI (tr|A5AKC5) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_002983 PE=4 SV=1
Length = 591
Score = 53.5 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 2 KHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLINTV 54
KHIDV HF+R ++ + +++++KI N DM+ KA+ T++ KHCL LIN +
Sbjct: 537 KHIDVKLHFLRDVVSKDEVVVEKIHTNDNPXDMLTKALTTIKSKHCLSLINIL 589
>A5BMJ8_VITVI (tr|A5BMJ8) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_005673 PE=4 SV=1
Length = 209
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLI 51
TKHIDV +FV+ I+ +G+I + KI + N +DM+ K+VI +FKHCLDL+
Sbjct: 154 TKHIDVRMNFVKNILTKGEIQVVKIHIEDNLVDMLTKSVIVAKFKHCLDLV 204
>A5C0Q1_VITVI (tr|A5C0Q1) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_016973 PE=4 SV=1
Length = 699
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 1 TKHIDV*YHFVRVIMEEGDILLQKIKMTKNSIDMMMKAVITVEFKHCLDLIN 52
TKH DV YHFV I+ GDI++ K+ N I+M K + +F+HCLDL++
Sbjct: 645 TKHFDVRYHFVXDIIASGDIVVAKVSTHDNPINMXTKXLPIAKFEHCLDLVS 696