Jatropha Genome Database

JcCB0286801.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0286801.10 - phase: 0 /partial
         (218 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D7U897_VITVI (tr|D7U897) Whole genome shotgun sequence of line P...   149   2e-34
B9RL60_RICCO (tr|B9RL60) Nucleic acid binding protein, putative ...   108   3e-22
D7KSN0_ARALY (tr|D7KSN0) Zinc finger (CCCH-type) family protein ...    95   4e-18
B9N805_POPTR (tr|B9N805) Predicted protein OS=Populus trichocarp...    82   5e-14
B6SW16_MAIZE (tr|B6SW16) Nucleic acid binding protein OS=Zea may...    79   3e-13
C0PF38_MAIZE (tr|C0PF38) Putative uncharacterized protein OS=Zea...    79   3e-13
C5Z997_SORBI (tr|C5Z997) Putative uncharacterized protein Sb10g0...    71   7e-11
B9FQS9_ORYSJ (tr|B9FQS9) Putative uncharacterized protein OS=Ory...    62   5e-08
B8B264_ORYSI (tr|B8B264) Putative uncharacterized protein OS=Ory...    59   4e-07

>D7U897_VITVI (tr|D7U897) Whole genome shotgun sequence of line PN40024,
           scaffold_70.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00034266001 PE=4 SV=1
          Length = 394

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/208 (48%), Positives = 129/208 (62%), Gaps = 11/208 (5%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALS-QSPFAGVTPPAIATSDQNNAPPLVSSF 59
           VERER+LLNSKLIEF++L+R PY AP  S L+ QSP     P A + + QNN PP  SSF
Sbjct: 180 VERERSLLNSKLIEFDSLLRKPYAAPPNSTLAIQSP--APNPDASSLTAQNNTPPSASSF 237

Query: 60  SQLGPSLNVESGTRPSSSSNNAFGQPNILSNSSQTSGSFGISNFAPANSGSISSQLPNQA 119
           SQL  S N+  GTRPS+ SNNAFGQ N +  SSQTSG+FG +N A  N+GS  SQLP Q 
Sbjct: 238 SQLSTSPNMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQM 297

Query: 120 SGNPFSSNVAGFSNSSAIINQSNPFDSSAVTKQVTNSSTAQHVIISNSPNLASNAVGQAT 179
            G+P  SN AGFS+++     S  F   A + Q+ + +  Q  I+S+     +N++  A 
Sbjct: 298 HGSPLPSNTAGFSHNNMSAG-SKAFSPPAASPQIISFANNQSPILSS----GTNSMFSAE 352

Query: 180 EHIHS-TNGMQKGAV--DASIWLKESWN 204
             +H+    MQ+     D SIWLKE WN
Sbjct: 353 STMHAQLEKMQRDNFSGDMSIWLKEEWN 380


>B9RL60_RICCO (tr|B9RL60) Nucleic acid binding protein, putative OS=Ricinus
           communis GN=RCOM_1667360 PE=4 SV=1
          Length = 282

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 61/77 (79%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALSQSPFAGVTPPAIATSDQNNAPPLVSSFS 60
           VERERNLL+SKLIEFENL+RNPY AP KSA SQSPF GVTP AI  S QNN PP VSSFS
Sbjct: 164 VERERNLLSSKLIEFENLLRNPYAAPPKSAFSQSPFPGVTPNAILPSGQNNPPPSVSSFS 223

Query: 61  QLGPSLNVESGTRPSSS 77
           QLG SLN+ + TR  S 
Sbjct: 224 QLGASLNMATRTRHDSC 240


>D7KSN0_ARALY (tr|D7KSN0) Zinc finger (CCCH-type) family protein OS=Arabidopsis
           lyrata subsp. lyrata GN=ARALYDRAFT_476679 PE=4 SV=1
          Length = 441

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 126/275 (45%), Gaps = 60/275 (21%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALSQSPFAGVTPPAIATSDQ-NNAPPLVSSF 59
           VERERNL NSK+ EFEN +RNPY     +  +QSPFA  TP     + Q N++PP  S F
Sbjct: 170 VERERNLQNSKIAEFENFLRNPYKGSVTA--NQSPFAATTPSIFPPTGQINSSPPGFSGF 227

Query: 60  SQLGPSLNVESGTRPSSSSNNAFGQPNILSNSSQTS----GSFGISNFAPANS-GSISSQ 114
           +Q     N  +G   SS   NAF   N  SN+ QT+     + G+S+  P N   S + Q
Sbjct: 228 NQQTAFANTNTGGLSSSGPPNAFASFNQQSNNQQTTFPNTNAGGVSSSGPPNPFASFNQQ 287

Query: 115 LPNQASGNPFSSNVAGFS-----NSSAIINQS---------NPFDSSAVTKQVTNSSTAQ 160
             NQ +  P ++N  G S     N+SA  N+           P  S     Q   S+T +
Sbjct: 288 SNNQQTAFP-NTNAGGLSSSGPPNASASFNKQPNAFSVNTPQPVPSGPSGFQTHPSTTFK 346

Query: 161 HVIISNSPNLAS-----NAVGQATEH--------------------------IHSTNG-- 187
                  P LA+     N  G +T                            + +TN   
Sbjct: 347 PASFGPGPGLATTPQNNNIFGPSTSAPAPNTSQNNQAAFNFNVPVASFTAPAVDTTNTSS 406

Query: 188 ---MQKG-AVDASIWLKESWNPGEIPEEAPPDQYI 218
              +Q G  VD+SIWLKE WNPGEIPE+APPD ++
Sbjct: 407 GTELQIGDPVDSSIWLKEKWNPGEIPEQAPPDAFV 441


>B9N805_POPTR (tr|B9N805) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_584526 PE=4 SV=1
          Length = 116

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 3   RERNLLNSKLIEFENLIRNPYVAPAKSA-LSQSPFAGVTPPAIATSDQNNAPPLVSSFSQ 61
           +ERNLL+SKLIEF NL+R+PY+AP+K A   QSP  G  P AI  + QN APP VSSF+Q
Sbjct: 40  KERNLLDSKLIEFNNLLRHPYIAPSKPAPAGQSPLFGAAPNAIPATAQNAAPPSVSSFAQ 99

Query: 62  LGPSLNVESGTRPSS 76
           L  SLN   GTR  S
Sbjct: 100 LETSLNTGFGTRHHS 114


>B6SW16_MAIZE (tr|B6SW16) Nucleic acid binding protein OS=Zea mays PE=2 SV=1
          Length = 401

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 110/229 (48%), Gaps = 26/229 (11%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALSQSP-------FAGVTPPAIATSDQNNAP 53
           VE E+NL N+KL +F N +  P ++     +SQ+P       F  V   +     QNN P
Sbjct: 184 VEGEKNLKNAKLTDFNNFLNTPRLS-----VSQTPSFPTVASFPEVKNNSAFGVSQNNGP 238

Query: 54  PLVSSFSQLGPSLNVESGTR--PSSSSNNAFGQPNILSNSSQTSGSFGISNFAPANSGSI 111
           P+ SSFSQ+G + N+  G+R  P   +N  FGQ    S+ +  + +FG S+     SG  
Sbjct: 239 PVFSSFSQIGVTTNMGPGSRTTPGVPTNTLFGQSTQPSHPTFPAPTFGRSDMKFGVSGPF 298

Query: 112 SSQLPNQASGNPFSSNVAGFSNSSAIINQSNPFDSSAVTKQVTNSSTAQHVIISNSPNLA 171
            SQ+  Q+SG    SN++ F N S            A  +Q  +SS+    I   S +L 
Sbjct: 299 GSQISQQSSGTFQGSNMSSFGNFSK---------PHASYQQSPSSSSHHRDIDRQSQDLL 349

Query: 172 SNAV--GQATEHIHSTNGMQKGAVDASIWLKESWNPGEIPEEAPPDQYI 218
           S  V    AT      +   +   D SIWLKE W+ GEIP   PP +++
Sbjct: 350 SGIVVPTSATNEAPVEDNKNENQ-DDSIWLKEKWSIGEIPLGEPPQRHV 397


>C0PF38_MAIZE (tr|C0PF38) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 401

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 110/229 (48%), Gaps = 26/229 (11%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALSQSP-------FAGVTPPAIATSDQNNAP 53
           VE E+NL N+KL +F N +  P ++     +SQ+P       F  V   +     QNN P
Sbjct: 184 VEGEKNLKNAKLTDFNNFLNTPRLS-----VSQTPSFPTVASFPEVKNNSAFGVSQNNGP 238

Query: 54  PLVSSFSQLGPSLNVESGTR--PSSSSNNAFGQPNILSNSSQTSGSFGISNFAPANSGSI 111
           P+ SSFSQ+G + N+  G+R  P   +N  FGQ    S+ +  + +FG S+     SG  
Sbjct: 239 PVFSSFSQIGVTTNMGPGSRTTPGVPTNTPFGQSTQPSHPTFPAPTFGRSDMKFGVSGPF 298

Query: 112 SSQLPNQASGNPFSSNVAGFSNSSAIINQSNPFDSSAVTKQVTNSSTAQHVIISNSPNLA 171
            SQ+  Q+SG    SN++ F N S            A  +Q  +SS+    I   S +L 
Sbjct: 299 GSQISQQSSGTFQGSNMSSFGNFSK---------PHASYQQSPSSSSHHRDIDRQSQDLL 349

Query: 172 SNAV--GQATEHIHSTNGMQKGAVDASIWLKESWNPGEIPEEAPPDQYI 218
           S  V    AT      +   +   D SIWLKE W+ GEIP   PP +++
Sbjct: 350 SGIVVPTSATNEAPVEDNKNENQ-DDSIWLKEKWSIGEIPLGEPPQRHV 397


>C5Z997_SORBI (tr|C5Z997) Putative uncharacterized protein Sb10g029250 OS=Sorghum
           bicolor GN=Sb10g029250 PE=4 SV=1
          Length = 412

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 116/229 (50%), Gaps = 26/229 (11%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALSQSP-------FAGVTPPAIATSDQNNAP 53
           VE ERNL N+KL EF N + NP+++     +SQ+P       F  V   +     QNN P
Sbjct: 195 VEGERNLQNAKLTEFNNFLNNPHLS-----VSQTPSFPTVASFPEVKNNSPFGVSQNNGP 249

Query: 54  PLVSSFSQLGPSLNVESGTR--PSSSSNNAFGQPNILSNSSQTSGSFGISNFAPANSGSI 111
           P+ SSFSQ+G + N+  G+R  P   +N+ FGQ N  S+    + +FG S+     SGS 
Sbjct: 250 PVFSSFSQIGAANNIGPGSRTTPGFPTNSIFGQSNQPSHPGFPTPTFGRSDMKFGVSGSF 309

Query: 112 SSQLPNQASGNPFSSNVAGFSNSSAIINQSNPFDSSAVTKQVTNSSTAQHVIISNSPNLA 171
            SQ+  Q+SG+   SN+      S++ N   P    A  +Q  +SS+    I   S +L 
Sbjct: 310 GSQISQQSSGSLQGSNM------SSVGNFPKP---HASYQQSPSSSSHHRDIDRQSQDLL 360

Query: 172 SNAVG--QATEHIHSTNGMQKGAVDASIWLKESWNPGEIPEEAPPDQYI 218
           S  V    AT      +   +   D SIWLKE W+ GEIP   PP ++I
Sbjct: 361 SGIVAPTSATNQAPVEDNKNENQ-DDSIWLKEKWSIGEIPLGEPPQRHI 408


>B9FQS9_ORYSJ (tr|B9FQS9) Putative uncharacterized protein OS=Oryza sativa subsp.
           japonica GN=OsJ_22559 PE=4 SV=1
          Length = 1360

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 97/212 (45%), Gaps = 29/212 (13%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALSQSPFAGVTPPAIATSDQNNAPPLVSSFS 60
           VE ERNL N+KL+EF NL+ +   +   S  + S F  V   +   + Q N PP+ SSFS
Sbjct: 188 VEGERNLQNAKLMEFTNLLNSARPSQTPSFPTMSSFPEVKNNSSFGASQTNGPPVFSSFS 247

Query: 61  QLGPSLNVESG---TRPSSSSNNAFGQPNILSNSSQTSGSFGISNFAPANSGSISSQLPN 117
           Q+G + N+  G   T P   +++ FG P   S++   + +FG S         +SS   N
Sbjct: 248 QIGAATNIGPGPGTTAPGMPASSPFGHP---SSAPLAAPTFGSSQM----KFGVSSVFGN 300

Query: 118 QASGNPFSSNVAGFSNSSAIINQSNPFDSSAVTKQVTNSSTAQHVIISN-SPNLASNAVG 176
           Q SG PF S             Q+  F SS      + +S+ QH  I   S  L +  V 
Sbjct: 301 QGSGQPFGS------------FQAPRFPSSK-----SPASSVQHRDIDRQSQELLNGMVT 343

Query: 177 QATEHIHSTNGMQKGA-VDASIWLKESWNPGE 207
             +     + G  K    D SIWLKE W  GE
Sbjct: 344 PPSVMFEESVGNNKNENQDDSIWLKEKWAIGE 375


>B8B264_ORYSI (tr|B8B264) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_24382 PE=4 SV=1
          Length = 1267

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 98/216 (45%), Gaps = 29/216 (13%)

Query: 1   VERERNLLNSKLIEFENLIRNPYVAPAKSALSQSPFAGVTPPAIATSDQNNAPPLVSSFS 60
           VE ERNL N+KL+EF NL+ +   +   S  + S F  V   +   + Q N PP+ SSFS
Sbjct: 190 VEGERNLQNAKLMEFTNLLNSARPSQTPSFPTMSSFPEVKNNSSFGASQTNGPPVFSSFS 249

Query: 61  QLGPSLNVESGTRPSSSSNNA---FGQPNILSNSSQTSGSFGISNFAPANSGSISSQLPN 117
           Q+G + N+  G   ++    A   FG P   S++   + +FG S         +SS   N
Sbjct: 250 QIGAATNIGPGPGTTTPGMPASSPFGHP---SSAPLAAPTFGSSQM----KFGVSSVFGN 302

Query: 118 QASGNPFSSNVAGFSNSSAIINQSNPFDSSAVTKQVTNSSTAQHVIISN-SPNLASNAVG 176
           Q SG PF S             Q+  F SS      + +S+ QH  I   S  L +  V 
Sbjct: 303 QGSGQPFGS------------FQAPRFPSSK-----SPASSVQHRDIDRQSQELLNGMVT 345

Query: 177 QATEHIHSTNGMQKGA-VDASIWLKESWNPGEIPEE 211
             +     + G  K    D SIWLKE W  GE+ ++
Sbjct: 346 PPSVMFEESVGNNKNENQDDSIWLKEKWAIGELHDD 381