Jatropha Genome Database
- JcCB0285631.20
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0285631.20 - phase: 1 /pseudo/partial
(90 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
A2XF64_ORYSI (tr|A2XF64) Putative uncharacterized protein OS=Ory... 82 2e-14
Q10N84_ORYSJ (tr|Q10N84) Os03g0278800 protein OS=Oryza sativa su... 81 4e-14
A2XF62_ORYSI (tr|A2XF62) Putative uncharacterized protein OS=Ory... 81 4e-14
C6SYX6_SOYBN (tr|C6SYX6) Putative uncharacterized protein OS=Gly... 74 8e-12
B6TNV4_MAIZE (tr|B6TNV4) RNA binding protein OS=Zea mays PE=2 SV=1 73 1e-11
C5WPC9_SORBI (tr|C5WPC9) Putative uncharacterized protein Sb01g0... 73 1e-11
D7TQ88_VITVI (tr|D7TQ88) Whole genome shotgun sequence of line P... 71 4e-11
B9SZB7_RICCO (tr|B9SZB7) RNA binding protein, putative OS=Ricinu... 62 2e-08
D7LJU4_ARALY (tr|D7LJU4) Putative uncharacterized protein OS=Ara... 54 5e-06
>A2XF64_ORYSI (tr|A2XF64) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_11005 PE=4 SV=1
Length = 173
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 42 RENMNAKYLDGWVIFVDPAKPREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
R+ MNAK+LDGWVIFVDPAKPR+Q+P P P + + TG+ TNKT+GWCG
Sbjct: 125 RQEMNAKFLDGWVIFVDPAKPRQQKPAPRPDTDSSHTGFTTNKTVGWCG 173
>Q10N84_ORYSJ (tr|Q10N84) Os03g0278800 protein OS=Oryza sativa subsp. japonica
GN=Os03g0278800 PE=4 SV=1
Length = 173
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 42 RENMNAKYLDGWVIFVDPAKPREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
R+ MNAK+LDGWVIFVDPAKPR+Q+P P P + + TG+ TNKT+GWCG
Sbjct: 125 RQEMNAKFLDGWVIFVDPAKPRQQKPAPRPDTDSSHTGFTTNKTVGWCG 173
>A2XF62_ORYSI (tr|A2XF62) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_11004 PE=4 SV=1
Length = 173
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 42 RENMNAKYLDGWVIFVDPAKPREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
R+ MNAK+LDGWVIFVDPAKPR+Q+P P P + + TG+ TNKT+GWCG
Sbjct: 125 RQEMNAKFLDGWVIFVDPAKPRQQKPAPRPDTDSSHTGFTTNKTVGWCG 173
>C6SYX6_SOYBN (tr|C6SYX6) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 139
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 40/49 (81%)
Query: 42 RENMNAKYLDGWVIFVDPAKPREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
RE MNAK+LDGWVIFVDPAKPRE RPP +P++TG+ NKT+GWCG
Sbjct: 91 REGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSETGFTVNKTVGWCG 139
>B6TNV4_MAIZE (tr|B6TNV4) RNA binding protein OS=Zea mays PE=2 SV=1
Length = 166
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 42 RENMNAKYLDGWVIFVDPAKPREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
R+ MNAK+LDGWVIFVDPAKPR+ +P P + G+ TNKT+GWCG
Sbjct: 118 RQEMNAKFLDGWVIFVDPAKPRQPKPAPQQDTGSSHAGFTTNKTVGWCG 166
>C5WPC9_SORBI (tr|C5WPC9) Putative uncharacterized protein Sb01g039290 OS=Sorghum
bicolor GN=Sb01g039290 PE=4 SV=1
Length = 169
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 37/49 (75%)
Query: 42 RENMNAKYLDGWVIFVDPAKPREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
R+ MNAK+LDGWVIFVDPAKPR+ +P P + G+ TNKT+GWCG
Sbjct: 121 RQEMNAKFLDGWVIFVDPAKPRQPKPAPEQDTSSSHVGFTTNKTVGWCG 169
>D7TQ88_VITVI (tr|D7TQ88) Whole genome shotgun sequence of line PN40024,
scaffold_40.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00025527001 PE=4 SV=1
Length = 140
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 42/49 (85%)
Query: 42 RENMNAKYLDGWVIFVDPAKPREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
RE MNAK+LDGWVIFVDPAKPRE RPPP E ++TG+RTNKTIGWCG
Sbjct: 92 REGMNAKFLDGWVIFVDPAKPREPRPPPQQEPESSETGFRTNKTIGWCG 140
>B9SZB7_RICCO (tr|B9SZB7) RNA binding protein, putative OS=Ricinus communis
GN=RCOM_1202360 PE=4 SV=1
Length = 144
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 42 RENMNAKYLDGWVIFVDPAK--PREQRPPPSPVQEPTDTGYRTNKTIGWCG 90
RE MNAK+LDGWVIFVDPAK + PPP P E ++TGY+ N+TIGWCG
Sbjct: 94 REGMNAKFLDGWVIFVDPAKPREQRLPPPPPPQPETSETGYKINRTIGWCG 144
>D7LJU4_ARALY (tr|D7LJU4) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_902894 PE=4 SV=1
Length = 142
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 8/53 (15%)
Query: 42 RENMNAKYLDGWVIFVDPAKPRE-----QRPPPSPVQEPTDTGYRTNKTIGWC 89
+ MNAK+LDGWVIFVDPA+PRE QR PP + + +G+ TNKTIGWC
Sbjct: 92 KAEMNAKFLDGWVIFVDPARPREPRRPLQREPP---RSSSGSGFTTNKTIGWC 141