Jatropha Genome Database
- JcCB0247731.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0247731.10 + phase: 0 /partial
(187 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9T434_RICCO (tr|B9T434) Diaminopimelate epimerase, putative OS=... 365 2e-99
D7TQF7_VITVI (tr|D7TQF7) Whole genome shotgun sequence of line P... 349 6e-95
B9HCY9_POPTR (tr|B9HCY9) Predicted protein OS=Populus trichocarp... 337 3e-91
D7LUJ8_ARALY (tr|D7LUJ8) Diaminopimelate epimerase family protei... 333 6e-90
B9IGD7_POPTR (tr|B9IGD7) Predicted protein (Fragment) OS=Populus... 331 2e-89
C6T990_SOYBN (tr|C6T990) Putative uncharacterized protein OS=Gly... 321 3e-86
C6TKD3_SOYBN (tr|C6TKD3) Putative uncharacterized protein OS=Gly... 320 4e-86
D2DKE8_SOYBN (tr|D2DKE8) Diaminopimelate epimerase OS=Glycine ma... 317 3e-85
B4F833_MAIZE (tr|B4F833) Diaminopimelate epimerase OS=Zea mays P... 313 6e-84
B4FVI8_MAIZE (tr|B4FVI8) Putative uncharacterized protein OS=Zea... 313 8e-84
B4FQ56_MAIZE (tr|B4FQ56) Putative uncharacterized protein OS=Zea... 312 1e-83
C4J3L7_MAIZE (tr|C4J3L7) Putative uncharacterized protein OS=Zea... 307 3e-82
B8LLS8_PICSI (tr|B8LLS8) Putative uncharacterized protein OS=Pic... 290 4e-77
C5YPW9_SORBI (tr|C5YPW9) Putative uncharacterized protein Sb08g0... 244 3e-63
Q3M8I9_ANAVT (tr|Q3M8I9) Diaminopimelate epimerase OS=Anabaena v... 236 7e-61
A0YIC3_LYNSP (tr|A0YIC3) Diaminopimelate epimerase OS=Lyngbya sp... 234 2e-60
B4WKJ6_9SYNE (tr|B4WKJ6) Diaminopimelate epimerase OS=Synechococ... 234 3e-60
A0ZFP0_NODSP (tr|A0ZFP0) Diaminopimelate epimerase OS=Nodularia ... 233 8e-60
B1WRQ3_CYAA5 (tr|B1WRQ3) Diaminopimelate epimerase OS=Cyanothece... 231 3e-59
Q01DU1_OSTTA (tr|Q01DU1) Homology to unknown gene OS=Ostreococcu... 230 5e-59
Q4C9K0_CROWT (tr|Q4C9K0) Diaminopimelate epimerase OS=Crocosphae... 230 5e-59
A8J8B3_CHLRE (tr|A8J8B3) Diaminopimelate epimerase OS=Chlamydomo... 229 1e-58
D7E3Y4_ANAAZ (tr|D7E3Y4) Diaminopimelate epimerase OS='Nostoc az... 227 4e-58
A3IPP9_9CHRO (tr|A3IPP9) Diaminopimelate epimerase OS=Cyanothece... 226 6e-58
A4RTF7_OSTLU (tr|A4RTF7) Predicted protein OS=Ostreococcus lucim... 226 6e-58
C7QMM0_CYAP0 (tr|C7QMM0) Diaminopimelate epimerase OS=Cyanothece... 226 7e-58
D4TCL8_9NOST (tr|D4TCL8) Diaminopimelate epimerase OS=Cylindrosp... 224 5e-57
D4ZQS6_SPIPL (tr|D4ZQS6) Diaminopimelate epimerase OS=Arthrospir... 223 8e-57
D7G034_ECTSI (tr|D7G034) Diaminopimelate epimerase OS=Ectocarpus... 221 4e-56
C1E847_9CHLO (tr|C1E847) Predicted protein OS=Micromonas sp. RCC... 219 2e-55
B5W4D7_SPIMA (tr|B5W4D7) Diaminopimelate epimerase OS=Arthrospir... 217 4e-55
A8YK88_MICAE (tr|A8YK88) Diaminopimelate epimerase OS=Microcysti... 217 6e-55
A1KYM7_9CYAN (tr|A1KYM7) Diaminopimelate epimerase OS=cyanobacte... 210 7e-53
B7FIP6_MEDTR (tr|B7FIP6) Putative uncharacterized protein OS=Med... 208 2e-52
C1MZF9_MICPS (tr|C1MZF9) Predicted protein OS=Micromonas pusilla... 208 3e-52
D4TMN5_9NOST (tr|D4TMN5) Diaminopimelate epimerase OS=Raphidiops... 206 1e-51
B7FV89_PHATR (tr|B7FV89) Predicted protein OS=Phaeodactylum tric... 191 3e-47
D3EP27_UCYNA (tr|D3EP27) Diaminopimelate epimerase OS=cyanobacte... 185 2e-45
B8LBN1_THAPS (tr|B8LBN1) Diaminopimelate epimerase OS=Thalassios... 177 6e-43
Q7NMF1_GLOVI (tr|Q7NMF1) Diaminopimelate epimerase OS=Gloeobacte... 171 4e-41
C9LLL5_9FIRM (tr|C9LLL5) Diaminopimelate epimerase OS=Dialister ... 167 4e-40
C9KKR6_9FIRM (tr|C9KKR6) Diaminopimelate epimerase OS=Mitsuokell... 164 3e-39
A5GT84_SYNR3 (tr|A5GT84) Diaminopimelate epimerase OS=Synechococ... 162 2e-38
B5IJR7_9CHRO (tr|B5IJR7) Diaminopimelate epimerase OS=Cyanobium ... 159 9e-38
C9LXX1_9FIRM (tr|C9LXX1) Diaminopimelate epimerase OS=Selenomona... 155 1e-36
Q24TW0_DESHY (tr|Q24TW0) Diaminopimelate epimerase OS=Desulfitob... 154 3e-36
Q0IAE7_SYNS3 (tr|Q0IAE7) Diaminopimelate epimerase OS=Synechococ... 154 4e-36
A3YZK9_9SYNE (tr|A3YZK9) Diaminopimelate epimerase OS=Synechococ... 154 5e-36
D4S5H7_9FIRM (tr|D4S5H7) Diaminopimelate epimerase OS=Selenomona... 152 2e-35
A1HMY7_9FIRM (tr|A1HMY7) Diaminopimelate epimerase OS=Thermosinu... 152 2e-35
B1X3T5_PAUCH (tr|B1X3T5) Diaminopimelate epimerase OS=Paulinella... 152 2e-35
D5X7U3_THEPJ (tr|D5X7U3) Diaminopimelate epimerase OS=Thermincol... 151 4e-35
D1NN49_CLOTM (tr|D1NN49) Diaminopimelate epimerase OS=Clostridiu... 150 6e-35
C7HJ64_CLOTM (tr|C7HJ64) Diaminopimelate epimerase OS=Clostridiu... 150 6e-35
C8W080_DESAS (tr|C8W080) Diaminopimelate epimerase OS=Desulfotom... 149 1e-34
A5GL73_SYNPW (tr|A5GL73) Diaminopimelate epimerase OS=Synechococ... 149 1e-34
Q05SY3_9SYNE (tr|Q05SY3) Diaminopimelate epimerase OS=Synechococ... 149 1e-34
A3Z6S8_9SYNE (tr|A3Z6S8) Diaminopimelate epimerase OS=Synechococ... 149 1e-34
A4CUI5_SYNPV (tr|A4CUI5) Diaminopimelate epimerase OS=Synechococ... 148 2e-34
Q7U6T2_SYNPX (tr|Q7U6T2) Diaminopimelate epimerase OS=Synechococ... 148 3e-34
Q067B7_9SYNE (tr|Q067B7) Diaminopimelate epimerase OS=Synechococ... 147 6e-34
D2R217_PIRSD (tr|D2R217) Diaminopimelate epimerase OS=Pirellula ... 146 9e-34
C3RLM7_9MOLU (tr|C3RLM7) Diaminopimelate epimerase OS=Mollicutes... 145 2e-33
B0N3X2_9FIRM (tr|B0N3X2) Diaminopimelate epimerase OS=Clostridiu... 145 2e-33
Q39RB7_GEOMG (tr|Q39RB7) Diaminopimelate epimerase OS=Geobacter ... 144 5e-33
B0SJ91_LEPBP (tr|B0SJ91) Diaminopimelate epimerase OS=Leptospira... 143 7e-33
B1C3N1_9FIRM (tr|B1C3N1) Diaminopimelate epimerase OS=Clostridiu... 143 8e-33
D7AF85_GEOSL (tr|D7AF85) Diaminopimelate epimerase OS=Geobacter ... 143 1e-32
Q74FS5_GEOSL (tr|Q74FS5) Diaminopimelate epimerase OS=Geobacter ... 143 1e-32
B9M4N3_GEOSF (tr|B9M4N3) Diaminopimelate epimerase OS=Geobacter ... 142 1e-32
A6CA20_9PLAN (tr|A6CA20) Diaminopimelate epimerase OS=Planctomyc... 142 2e-32
C4V4G3_9FIRM (tr|C4V4G3) Diaminopimelate epimerase OS=Selenomona... 142 2e-32
A2C9T8_PROM3 (tr|A2C9T8) Diaminopimelate epimerase OS=Prochloroc... 142 2e-32
Q3AXV6_SYNS9 (tr|Q3AXV6) Diaminopimelate epimerase OS=Synechococ... 142 2e-32
D4UPU6_RUMAL (tr|D4UPU6) Diaminopimelate epimerase OS=Ruminococc... 141 3e-32
D3NM52_9FIRM (tr|D3NM52) Diaminopimelate epimerase OS=Ethanolige... 141 3e-32
D4IXE0_BUTFI (tr|D4IXE0) Diaminopimelate epimerase OS=Butyrivibr... 140 6e-32
B3EBJ0_GEOLS (tr|B3EBJ0) Diaminopimelate epimerase OS=Geobacter ... 140 6e-32
Q4K3W2_PSEF5 (tr|Q4K3W2) Diaminopimelate epimerase OS=Pseudomona... 140 6e-32
B7ASA9_9BACE (tr|B7ASA9) Putative uncharacterized protein OS=Bac... 140 6e-32
A3ZPZ9_9PLAN (tr|A3ZPZ9) Diaminopimelate epimerase OS=Blastopire... 140 8e-32
C9R855_AMMDK (tr|C9R855) Diaminopimelate epimerase OS=Ammonifex ... 139 1e-31
A5G8E2_GEOUR (tr|A5G8E2) Diaminopimelate epimerase OS=Geobacter ... 139 1e-31
D4LE47_9FIRM (tr|D4LE47) Diaminopimelate epimerase OS=Ruminococc... 139 2e-31
A9BAE5_PROM4 (tr|A9BAE5) Diaminopimelate epimerase OS=Prochloroc... 138 2e-31
C6MV42_9DELT (tr|C6MV42) Diaminopimelate epimerase OS=Geobacter ... 138 3e-31
B5EAT0_GEOBB (tr|B5EAT0) Diaminopimelate epimerase OS=Geobacter ... 137 4e-31
D4L4P4_9FIRM (tr|D4L4P4) Carbamoyl-phosphate synthase large subu... 137 4e-31
C4G3I1_ABIDE (tr|C4G3I1) Diaminopimelate epimerase OS=Abiotrophi... 137 4e-31
Q3AJV7_SYNSC (tr|Q3AJV7) Diaminopimelate epimerase OS=Synechococ... 137 6e-31
A7VC93_9CLOT (tr|A7VC93) Diaminopimelate epimerase OS=Clostridiu... 137 6e-31
A1AUI6_PELPD (tr|A1AUI6) Diaminopimelate epimerase OS=Pelobacter... 137 7e-31
B0KA18_THEP3 (tr|B0KA18) Diaminopimelate epimerase OS=Thermoanae... 137 7e-31
B0K299_THEPX (tr|B0K299) Diaminopimelate epimerase OS=Thermoanae... 137 7e-31
C7ITQ2_THEET (tr|C7ITQ2) Diaminopimelate epimerase OS=Thermoanae... 136 8e-31
C7HR72_9THEO (tr|C7HR72) Diaminopimelate epimerase OS=Thermoanae... 136 8e-31
C5UAG1_THEBR (tr|C5UAG1) Diaminopimelate epimerase OS=Thermoanae... 136 8e-31
D4MWP8_9FIRM (tr|D4MWP8) Diaminopimelate epimerase OS=butyrate-p... 136 1e-30
B0P3K7_9CLOT (tr|B0P3K7) Diaminopimelate epimerase OS=Clostridiu... 136 1e-30
C6DYE5_GEOSM (tr|C6DYE5) Diaminopimelate epimerase OS=Geobacter ... 135 1e-30
B9Z0T9_9NEIS (tr|B9Z0T9) Diaminopimelate epimerase OS=Lutiella n... 135 1e-30
C7IDA2_9CLOT (tr|C7IDA2) Diaminopimelate epimerase OS=Clostridiu... 135 1e-30
C6LHV8_9FIRM (tr|C6LHV8) Diaminopimelate epimerase OS=Bryantella... 135 2e-30
D4JIW6_9FIRM (tr|D4JIW6) Diaminopimelate epimerase OS=Eubacteriu... 135 2e-30
D6E3Z8_9FIRM (tr|D6E3Z8) Diaminopimelate epimerase OS=Eubacteriu... 135 2e-30
A7AZS1_RUMGN (tr|A7AZS1) Putative uncharacterized protein OS=Rum... 135 2e-30
C0EZ50_9FIRM (tr|C0EZ50) Diaminopimelate epimerase OS=Eubacteriu... 135 2e-30
Q39ZZ8_PELCD (tr|Q39ZZ8) Diaminopimelate epimerase OS=Pelobacter... 135 3e-30
C3K436_PSEFS (tr|C3K436) Diaminopimelate epimerase OS=Pseudomona... 135 3e-30
D7CLP5_9FIRM (tr|D7CLP5) Diaminopimelate epimerase OS=Syntrophot... 134 4e-30
D5SNB0_PLAL2 (tr|D5SNB0) Diaminopimelate epimerase OS=Planctomyc... 134 5e-30
D4XXY4_9CHLR (tr|D4XXY4) Diaminopimelate epimerase OS=Dehalogeni... 134 5e-30
D7I6G6_PSESS (tr|D7I6G6) Diaminopimelate epimerase OS=Pseudomona... 134 5e-30
A6UN47_METVS (tr|A6UN47) Diaminopimelate epimerase OS=Methanococ... 134 6e-30
B0ME98_9FIRM (tr|B0ME98) Diaminopimelate epimerase OS=Anaerostip... 134 6e-30
D3E5S4_GEOS4 (tr|D3E5S4) Diaminopimelate epimerase OS=Geobacillu... 133 7e-30
C6J2A7_9BACL (tr|C6J2A7) Diaminopimelate epimerase OS=Paenibacil... 133 8e-30
A5KLX2_9FIRM (tr|A5KLX2) Diaminopimelate epimerase OS=Ruminococc... 133 9e-30
D3LTT0_9FIRM (tr|D3LTT0) Diaminopimelate epimerase OS=Megasphaer... 133 1e-29
B0PBH6_9FIRM (tr|B0PBH6) Putative uncharacterized protein OS=Ana... 133 1e-29
A7VVM6_9CLOT (tr|A7VVM6) Putative uncharacterized protein OS=Clo... 132 1e-29
D4M005_9FIRM (tr|D4M005) Diaminopimelate epimerase OS=Ruminococc... 132 1e-29
C6D4H0_PAESJ (tr|C6D4H0) Diaminopimelate epimerase OS=Paenibacil... 132 1e-29
C7H523_9FIRM (tr|C7H523) Diaminopimelate epimerase OS=Faecalibac... 132 2e-29
Q1K3Q6_DESAC (tr|Q1K3Q6) Diaminopimelate epimerase OS=Desulfurom... 132 2e-29
A6BDH2_9FIRM (tr|A6BDH2) Putative uncharacterized protein OS=Dor... 132 2e-29
C5AEZ7_BURGB (tr|C5AEZ7) Diaminopimelate epimerase OS=Burkholder... 131 3e-29
Q3ZXC7_DEHSC (tr|Q3ZXC7) Diaminopimelate epimerase OS=Dehalococc... 131 4e-29
D3SIJ1_DEHSG (tr|D3SIJ1) Diaminopimelate epimerase OS=Dehalococc... 131 4e-29
C0C049_9CLOT (tr|C0C049) Putative uncharacterized protein OS=Clo... 130 6e-29
D2BHI7_DEHSV (tr|D2BHI7) Diaminopimelate epimerase OS=Dehalococc... 130 7e-29
D3T2Y1_THEIA (tr|D3T2Y1) Diaminopimelate epimerase OS=Thermoanae... 130 8e-29
D6KQD6_9FIRM (tr|D6KQD6) Diaminopimelate epimerase OS=Veillonell... 130 9e-29
D6KJW7_9FIRM (tr|D6KJW7) Diaminopimelate epimerase OS=Veillonell... 130 9e-29
D1YPZ9_9FIRM (tr|D1YPZ9) Diaminopimelate epimerase OS=Veillonell... 130 9e-29
A5WAU5_PSEP1 (tr|A5WAU5) Diaminopimelate epimerase OS=Pseudomona... 129 1e-28
A5FRC6_DEHSB (tr|A5FRC6) Diaminopimelate epimerase OS=Dehalococc... 129 1e-28
D7APG8_9THEO (tr|D7APG8) Diaminopimelate epimerase OS=Thermoanae... 129 1e-28
D0CJ51_9SYNE (tr|D0CJ51) Diaminopimelate epimerase OS=Synechococ... 129 2e-28
B6FUM8_9CLOT (tr|B6FUM8) Putative uncharacterized protein OS=Clo... 129 2e-28
B7S2B6_9GAMM (tr|B7S2B6) Diaminopimelate epimerase OS=marine gam... 129 2e-28
D5CU55_SIDLE (tr|D5CU55) Diaminopimelate epimerase OS=Sideroxyda... 128 2e-28
A3JE40_9ALTE (tr|A3JE40) Diaminopimelate epimerase OS=Marinobact... 128 3e-28
C4Z3I0_EUBE2 (tr|C4Z3I0) Diaminopimelate epimerase OS=Eubacteriu... 128 3e-28
B0G1Z4_9FIRM (tr|B0G1Z4) Putative uncharacterized protein OS=Dor... 128 3e-28
Q3Z8H4_DEHE1 (tr|Q3Z8H4) Diaminopimelate epimerase OS=Dehalococc... 128 3e-28
D1BPE4_VEIPT (tr|D1BPE4) Diaminopimelate epimerase OS=Veillonell... 127 4e-28
A6F216_9ALTE (tr|A6F216) Diaminopimelate epimerase OS=Marinobact... 127 4e-28
B5YL43_THEYD (tr|B5YL43) Diaminopimelate epimerase OS=Thermodesu... 127 5e-28
D0LTS4_HALO1 (tr|D0LTS4) Diaminopimelate epimerase OS=Haliangium... 127 5e-28
A1TXX7_MARAV (tr|A1TXX7) Diaminopimelate epimerase OS=Marinobact... 126 9e-28
D4RZ76_9FIRM (tr|D4RZ76) Diaminopimelate epimerase OS=Butyrivibr... 126 9e-28
D4KBN1_9FIRM (tr|D4KBN1) Diaminopimelate epimerase OS=Faecalibac... 126 1e-27
A8S7U5_9FIRM (tr|A8S7U5) Diaminopimelate epimerase OS=Faecalibac... 126 1e-27
B9MLW7_ANATD (tr|B9MLW7) Diaminopimelate epimerase OS=Anaerocell... 126 1e-27
D4DPB0_NEIEG (tr|D4DPB0) Diaminopimelate epimerase OS=Neisseria ... 126 1e-27
C4FN33_9FIRM (tr|C4FN33) Diaminopimelate epimerase OS=Veillonell... 126 1e-27
D5R8I5_9FIRM (tr|D5R8I5) Diaminopimelate epimerase OS=Clostridiu... 125 2e-27
C6PE47_CLOTS (tr|C6PE47) Diaminopimelate epimerase OS=Thermoanae... 125 2e-27
C7P6F3_METFA (tr|C7P6F3) Diaminopimelate epimerase OS=Methanocal... 125 2e-27
D1N121_9BACT (tr|D1N121) Diaminopimelate epimerase OS=Victivalli... 125 2e-27
C4KD15_THASP (tr|C4KD15) Diaminopimelate epimerase OS=Thauera sp... 125 2e-27
D6JSY3_ACIG3 (tr|D6JSY3) Diaminopimelate epimerase OS=Acinetobac... 125 3e-27
A4XJ32_CALS8 (tr|A4XJ32) Diaminopimelate epimerase OS=Caldicellu... 125 3e-27
D4LQR2_9FIRM (tr|D4LQR2) Diaminopimelate epimerase OS=Ruminococc... 125 3e-27
C0DT95_EIKCO (tr|C0DT95) Diaminopimelate epimerase OS=Eikenella ... 125 3e-27
B9TEQ5_RICCO (tr|B9TEQ5) Diaminopimelate epimerase, putative OS=... 124 3e-27
A7JUW9_PASHA (tr|A7JUW9) Diaminopimelate epimerase OS=Mannheimia... 124 4e-27
A5Z6H7_9FIRM (tr|A5Z6H7) Diaminopimelate epimerase OS=Eubacteriu... 124 4e-27
A5ZMM8_9FIRM (tr|A5ZMM8) Putative uncharacterized protein OS=Rum... 124 5e-27
B6WRE7_9DELT (tr|B6WRE7) Diaminopimelate epimerase OS=Desulfovib... 124 5e-27
B5CS56_9FIRM (tr|B5CS56) Diaminopimelate epimerase OS=Ruminococc... 124 5e-27
C5V604_9PROT (tr|C5V604) Diaminopimelate epimerase OS=Gallionell... 124 5e-27
B1TAX6_9BURK (tr|B1TAX6) Diaminopimelate epimerase OS=Burkholder... 124 6e-27
D4JYF3_9FIRM (tr|D4JYF3) Diaminopimelate epimerase OS=Faecalibac... 124 6e-27
C7RPB8_ACCPU (tr|C7RPB8) Diaminopimelate epimerase OS=Accumuliba... 123 1e-26
D4LKA8_9FIRM (tr|D4LKA8) Diaminopimelate epimerase OS=Ruminococc... 122 1e-26
B0NK22_EUBSP (tr|B0NK22) Putative uncharacterized protein OS=Clo... 122 1e-26
B8DZX7_DICTD (tr|B8DZX7) Diaminopimelate epimerase OS=Dictyoglom... 122 1e-26
C9RGT5_METVM (tr|C9RGT5) Diaminopimelate epimerase OS=Methanocal... 122 1e-26
C0ZH35_BREBN (tr|C0ZH35) Diaminopimelate epimerase OS=Brevibacil... 122 2e-26
C0N8U7_9GAMM (tr|C0N8U7) Diaminopimelate epimerase OS=Methylopha... 122 2e-26
A6T2Z4_JANMA (tr|A6T2Z4) Diaminopimelate epimerase OS=Janthinoba... 122 2e-26
D0S155_ACICA (tr|D0S155) Diaminopimelate epimerase OS=Acinetobac... 122 2e-26
D0SK96_ACIJU (tr|D0SK96) Diaminopimelate epimerase OS=Acinetobac... 122 2e-26
D1T0B5_9BURK (tr|D1T0B5) Diaminopimelate epimerase OS=Acidovorax... 122 2e-26
A6NZA1_9BACE (tr|A6NZA1) Diaminopimelate epimerase OS=Bacteroide... 122 2e-26
D6VHS1_9BURK (tr|D6VHS1) Diaminopimelate epimerase OS=Alicycliph... 122 3e-26
D5U513_BRAM5 (tr|D5U513) Diaminopimelate epimerase OS=Brachyspir... 121 3e-26
B6C3A3_9GAMM (tr|B6C3A3) Diaminopimelate epimerase OS=Nitrosococ... 121 4e-26
D0BWM7_9GAMM (tr|D0BWM7) Diaminopimelate epimerase OS=Acinetobac... 121 4e-26
Q1BSN5_BURCA (tr|Q1BSN5) Diaminopimelate epimerase OS=Burkholder... 121 4e-26
A0KBF6_BURCH (tr|A0KBF6) Diaminopimelate epimerase OS=Burkholder... 121 4e-26
Q2NE08_METST (tr|Q2NE08) Diaminopimelate epimerase OS=Methanosph... 120 5e-26
D0CBH2_ACIBA (tr|D0CBH2) Diaminopimelate epimerase OS=Acinetobac... 120 5e-26
C0EAG3_9CLOT (tr|C0EAG3) Diaminopimelate epimerase OS=Clostridiu... 120 5e-26
A1WC24_ACISJ (tr|A1WC24) Diaminopimelate epimerase OS=Acidovorax... 120 6e-26
D3S6T6_METSF (tr|D3S6T6) Diaminopimelate epimerase OS=Methanocal... 120 6e-26
B1G3K4_9BURK (tr|B1G3K4) Diaminopimelate epimerase OS=Burkholder... 120 7e-26
D5VQQ0_METIM (tr|D5VQQ0) Diaminopimelate epimerase OS=Methanocal... 120 8e-26
D3RV79_ALLVD (tr|D3RV79) Diaminopimelate epimerase OS=Allochroma... 120 9e-26
C0CQW1_9FIRM (tr|C0CQW1) Diaminopimelate epimerase OS=Blautia hy... 120 1e-25
C6BK76_RALP1 (tr|C6BK76) Diaminopimelate epimerase OS=Ralstonia ... 120 1e-25
B1YPQ6_BURA4 (tr|B1YPQ6) Diaminopimelate epimerase OS=Burkholder... 119 1e-25
C0VID7_9GAMM (tr|C0VID7) Diaminopimelate epimerase OS=Acinetobac... 119 1e-25
Q67SX4_SYMTH (tr|Q67SX4) Diaminopimelate epimerase OS=Symbiobact... 119 1e-25
Q2BRG0_9GAMM (tr|Q2BRG0) Diaminopimelate epimerase OS=Neptuniiba... 119 1e-25
B9BGP9_9BURK (tr|B9BGP9) Diaminopimelate epimerase OS=Burkholder... 119 1e-25
B3CVY6_BURM1 (tr|B3CVY6) Diaminopimelate epimerase OS=Burkholder... 119 1e-25
A3LIJ5_PSEAE (tr|A3LIJ5) Diaminopimelate epimerase OS=Pseudomona... 119 1e-25
A3L1Y6_PSEAE (tr|A3L1Y6) Diaminopimelate epimerase OS=Pseudomona... 119 1e-25
Q39BY7_BURS3 (tr|Q39BY7) Diaminopimelate epimerase OS=Burkholder... 119 1e-25
D4XSH0_ACIHA (tr|D4XSH0) Diaminopimelate epimerase OS=Acinetobac... 119 1e-25
D1UFK3_9BURK (tr|D1UFK3) Diaminopimelate epimerase OS=Burkholder... 119 1e-25
Q1PZ14_9BACT (tr|Q1PZ14) Diaminopimelate epimerase OS=Candidatus... 119 2e-25
C9L533_RUMHA (tr|C9L533) Diaminopimelate epimerase OS=Blautia ha... 119 2e-25
D5NM52_9BURK (tr|D5NM52) Diaminopimelate epimerase OS=Burkholder... 119 2e-25
B4S2D9_ALTMD (tr|B4S2D9) Diaminopimelate epimerase OS=Alteromona... 119 2e-25
B1K0F5_BURCC (tr|B1K0F5) Diaminopimelate epimerase OS=Burkholder... 119 2e-25
A2VUK2_9BURK (tr|A2VUK2) Diaminopimelate epimerase OS=Burkholder... 119 2e-25
C5S4E6_9PAST (tr|C5S4E6) Diaminopimelate epimerase OS=Actinobaci... 119 2e-25
D5C3E8_NITHN (tr|D5C3E8) Diaminopimelate epimerase OS=Nitrosococ... 119 2e-25
A9BUI9_DELAS (tr|A9BUI9) Diaminopimelate epimerase OS=Delftia ac... 119 2e-25
Q1H4X0_METFK (tr|Q1H4X0) Diaminopimelate epimerase OS=Methylobac... 118 2e-25
B9CI10_9BURK (tr|B9CI10) Diaminopimelate epimerase OS=Burkholder... 118 2e-25
B9BW48_9BURK (tr|B9BW48) Diaminopimelate epimerase OS=Burkholder... 118 2e-25
B4E7Z8_BURCJ (tr|B4E7Z8) Diaminopimelate epimerase OS=Burkholder... 118 3e-25
A9AC26_BURM1 (tr|A9AC26) Diaminopimelate epimerase OS=Burkholder... 118 3e-25
D0SWR1_ACILW (tr|D0SWR1) Diaminopimelate epimerase OS=Acinetobac... 118 3e-25
Q1ZDC8_9GAMM (tr|Q1ZDC8) Diaminopimelate epimerase OS=Psychromon... 118 3e-25
D0KXR5_HALNC (tr|D0KXR5) Diaminopimelate epimerase OS=Halothioba... 118 4e-25
B1FII7_9BURK (tr|B1FII7) Diaminopimelate epimerase OS=Burkholder... 118 4e-25
C8KY75_9PAST (tr|C8KY75) Diaminopimelate epimerase OS=Actinobaci... 117 4e-25
D0SBU7_ACIJO (tr|D0SBU7) Diaminopimelate epimerase OS=Acinetobac... 117 4e-25
B0QSW6_HAEPR (tr|B0QSW6) Diaminopimelate epimerase OS=Haemophilu... 117 4e-25
Q1N419_9GAMM (tr|Q1N419) Diaminopimelate epimerase OS=Bermanella... 117 4e-25
C0B4X8_9FIRM (tr|C0B4X8) Diaminopimelate epimerase OS=Coprococcu... 117 4e-25
B5S7L4_RALSO (tr|B5S7L4) Diaminopimelate epimerase (Dap epimeras... 117 5e-25
A4CFE1_9GAMM (tr|A4CFE1) Diaminopimelate epimerase OS=Pseudoalte... 117 5e-25
B5YD87_DICT6 (tr|B5YD87) Diaminopimelate epimerase OS=Dictyoglom... 117 5e-25
D5X3Z2_THIK (tr|D5X3Z2) Diaminopimelate epimerase OS=Thiomonas i... 117 5e-25
B5SE92_RALSO (tr|B5SE92) Diaminopimelate epimerase (Dap epimeras... 117 5e-25
A3RPS1_RALSO (tr|A3RPS1) Diaminopimelate epimerase OS=Ralstonia ... 117 5e-25
D3N760_9BURK (tr|D3N760) Diaminopimelate epimerase OS=Burkholder... 117 6e-25
D3DYT5_METRM (tr|D3DYT5) Diaminopimelate epimerase OS=Methanobre... 117 6e-25
A0Y0F0_9GAMM (tr|A0Y0F0) Diaminopimelate epimerase OS=Alteromona... 117 6e-25
C6WT34_METML (tr|C6WT34) Diaminopimelate epimerase OS=Methyloten... 117 7e-25
D3SCB6_THISK (tr|D3SCB6) Diaminopimelate epimerase OS=Thioalkali... 117 7e-25
D6CV77_THIS3 (tr|D6CV77) Diaminopimelate epimerase OS=Thiomonas ... 117 7e-25
Q2C2Q2_9GAMM (tr|Q2C2Q2) Diaminopimelate epimerase OS=Photobacte... 117 7e-25
Q31IM2_THICR (tr|Q31IM2) Diaminopimelate epimerase OS=Thiomicros... 117 8e-25
Q2PYI1_9BACT (tr|Q2PYI1) Diaminopimelate epimerase OS=uncultured... 117 8e-25
D3AG19_9CLOT (tr|D3AG19) Diaminopimelate epimerase OS=Clostridiu... 117 8e-25
Q12EN2_POLSJ (tr|Q12EN2) Diaminopimelate epimerase OS=Polaromona... 116 9e-25
C6NUR4_9GAMM (tr|C6NUR4) Diaminopimelate epimerase OS=Acidithiob... 116 9e-25
A8KK52_BURPS (tr|A8KK52) Diaminopimelate epimerase OS=Burkholder... 116 1e-24
D0I356_VIBHO (tr|D0I356) Diaminopimelate epimerase OS=Grimontia ... 116 1e-24
Q6J694_9BURK (tr|Q6J694) Diaminopimelate epimerase OS=Collimonas... 115 1e-24
B4WYX4_9GAMM (tr|B4WYX4) Diaminopimelate epimerase OS=Alcanivora... 115 2e-24
C4FJG4_9AQUI (tr|C4FJG4) Diaminopimelate epimerase OS=Sulfurihyd... 115 2e-24
D4EES7_AGGAC (tr|D4EES7) Diaminopimelate epimerase OS=Aggregatib... 115 2e-24
C6M1B8_NEISI (tr|C6M1B8) Diaminopimelate epimerase OS=Neisseria ... 115 2e-24
C9P0S0_VIBME (tr|C9P0S0) Diaminopimelate epimerase OS=Vibrio met... 115 2e-24
A4B9F1_9GAMM (tr|A4B9F1) Diaminopimelate epimerase OS=Reinekea b... 115 2e-24
C9R2C0_AGGAD (tr|C9R2C0) Diaminopimelate epimerase OS=Aggregatib... 115 2e-24
A2BWL6_PROM5 (tr|A2BWL6) Diaminopimelate epimerase OS=Prochloroc... 115 2e-24
A0Y9E2_9GAMM (tr|A0Y9E2) Diaminopimelate epimerase OS=marine gam... 115 3e-24
C6TQH5_BURPS (tr|C6TQH5) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
C5ZH24_BURPS (tr|C5ZH24) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
C5NJD9_BURMA (tr|C5NJD9) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
C4KMC0_BURPS (tr|C4KMC0) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
C4B3I0_BURMA (tr|C4B3I0) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
C0YF85_BURPS (tr|C0YF85) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
B1HH03_BURPS (tr|B1HH03) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
A9K039_BURMA (tr|A9K039) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
A5XSH3_BURMA (tr|A5XSH3) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
A5TPJ6_BURMA (tr|A5TPJ6) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
A5J6J2_BURMA (tr|A5J6J2) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
A4LTV7_BURPS (tr|A4LTV7) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
D0T4W5_ACIRA (tr|D0T4W5) Diaminopimelate epimerase OS=Acinetobac... 115 3e-24
C6RQS2_ACIRA (tr|C6RQS2) Diaminopimelate epimerase OS=Acinetobac... 115 3e-24
B8CHW4_SHEPW (tr|B8CHW4) Diaminopimelate epimerase OS=Shewanella... 115 3e-24
D2ZNL3_METSM (tr|D2ZNL3) Diaminopimelate epimerase OS=Methanobre... 115 3e-24
A5UMZ9_METS3 (tr|A5UMZ9) Diaminopimelate epimerase OS=Methanobre... 115 3e-24
C9PM03_9PAST (tr|C9PM03) Diaminopimelate epimerase OS=Pasteurell... 115 3e-24
A2W6M9_9BURK (tr|A2W6M9) Diaminopimelate epimerase OS=Burkholder... 115 3e-24
B9AG14_METSM (tr|B9AG14) Diaminopimelate epimerase OS=Methanobre... 115 3e-24
Q60AJ4_METCA (tr|Q60AJ4) Diaminopimelate epimerase OS=Methylococ... 114 3e-24
C4EXB2_HAEIN (tr|C4EXB2) Diaminopimelate epimerase OS=Haemophilu... 114 3e-24
C1DV08_SULAA (tr|C1DV08) Diaminopimelate epimerase OS=Sulfurihyd... 114 4e-24
D7DKX7_9PROT (tr|D7DKX7) Diaminopimelate epimerase OS=Methyloten... 114 5e-24
B9P1W1_PROMA (tr|B9P1W1) Diaminopimelate epimerase OS=Prochloroc... 114 5e-24
D0W824_NEILA (tr|D0W824) Diaminopimelate epimerase OS=Neisseria ... 114 5e-24
A8G4T8_PROM2 (tr|A8G4T8) Diaminopimelate epimerase OS=Prochloroc... 114 5e-24
C6X8F3_METSD (tr|C6X8F3) Diaminopimelate epimerase OS=Methylovor... 114 6e-24
B7CYA6_BURPS (tr|B7CYA6) Diaminopimelate epimerase OS=Burkholder... 114 6e-24
C4IL55_CLOBU (tr|C4IL55) Diaminopimelate epimerase OS=Clostridiu... 114 6e-24
B1QW39_CLOBU (tr|B1QW39) Diaminopimelate epimerase OS=Clostridiu... 114 6e-24
C4GJF5_9NEIS (tr|C4GJF5) Putative uncharacterized protein OS=Kin... 114 6e-24
C5TBF1_ACIDE (tr|C5TBF1) Diaminopimelate epimerase OS=Acidovorax... 114 6e-24
C0QQ59_PERMH (tr|C0QQ59) Diaminopimelate epimerase OS=Persephone... 114 7e-24
Q7V1I3_PROMP (tr|Q7V1I3) Diaminopimelate epimerase OS=Prochloroc... 114 7e-24
D2ZUS1_NEIMU (tr|D2ZUS1) Diaminopimelate epimerase OS=Neisseria ... 114 7e-24
A4NF18_HAEIN (tr|A4NF18) Diaminopimelate epimerase OS=Haemophilu... 113 7e-24
C9MFE2_HAEIN (tr|C9MFE2) Diaminopimelate epimerase OS=Haemophilu... 113 8e-24
C9MEM8_HAEIN (tr|C9MEM8) Diaminopimelate epimerase OS=Haemophilu... 113 8e-24
A4NWV8_HAEIN (tr|A4NWV8) Diaminopimelate epimerase OS=Haemophilu... 113 8e-24
A4NPD8_HAEIN (tr|A4NPD8) Diaminopimelate epimerase OS=Haemophilu... 113 8e-24
A4N7F2_HAEIN (tr|A4N7F2) Diaminopimelate epimerase OS=Haemophilu... 113 8e-24
D0J7E6_COMT2 (tr|D0J7E6) Diaminopimelate epimerase OS=Comamonas ... 113 8e-24
A4N2Y7_HAEIN (tr|A4N2Y7) Diaminopimelate epimerase OS=Haemophilu... 113 8e-24
A1VSV4_POLNA (tr|A1VSV4) Diaminopimelate epimerase OS=Polaromona... 113 8e-24
D0Z0U1_LISDA (tr|D0Z0U1) Diaminopimelate epimerase OS=Photobacte... 113 8e-24
C4F4B0_HAEIN (tr|C4F4B0) Diaminopimelate epimerase OS=Haemophilu... 113 1e-23
Q3SFX7_THIDA (tr|Q3SFX7) Diaminopimelate epimerase OS=Thiobacill... 113 1e-23
C3X748_OXAFO (tr|C3X748) Diaminopimelate epimerase OS=Oxalobacte... 113 1e-23
Q1YY73_PHOPR (tr|Q1YY73) Diaminopimelate epimerase OS=Photobacte... 113 1e-23
C6AQB3_AGGAN (tr|C6AQB3) Diaminopimelate epimerase OS=Aggregatib... 113 1e-23
B7WTE4_COMTE (tr|B7WTE4) Diaminopimelate epimerase OS=Comamonas ... 113 1e-23
D2TV21_CITRI (tr|D2TV21) Diaminopimelate epimerase OS=Citrobacte... 113 1e-23
A4MWY3_HAEIN (tr|A4MWY3) Diaminopimelate epimerase OS=Haemophilu... 112 1e-23
A9MJ06_SALAR (tr|A9MJ06) Diaminopimelate epimerase OS=Salmonella... 112 1e-23
C4RIV3_9ACTO (tr|C4RIV3) Diaminopimelate epimerase OS=Micromonos... 112 1e-23
A8E8B9_BURPS (tr|A8E8B9) Diaminopimelate epimerase OS=Burkholder... 112 1e-23
B6XD12_9ENTR (tr|B6XD12) Diaminopimelate epimerase OS=Providenci... 112 1e-23
D0ZNS4_SALT1 (tr|D0ZNS4) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5Q5I6_SALVI (tr|B5Q5I6) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5PXL6_SALHA (tr|B5PXL6) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5PM52_SALET (tr|B5PM52) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5P8H4_SALET (tr|B5P8H4) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5NVU7_SALET (tr|B5NVU7) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5NHM7_SALET (tr|B5NHM7) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5N4A4_SALET (tr|B5N4A4) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5CH97_SALET (tr|B5CH97) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5C656_SALET (tr|B5C656) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B3YFL6_SALET (tr|B3YFL6) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
Q57HR0_SALCH (tr|Q57HR0) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
Q3MBA2_ANAVT (tr|Q3MBA2) Diaminopimelate epimerase OS=Anabaena v... 112 2e-23
C9XAF4_SALTD (tr|C9XAF4) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
C6CGK6_DICZE (tr|C6CGK6) Diaminopimelate epimerase OS=Dickeya ze... 112 2e-23
B5RFP9_SALG2 (tr|B5RFP9) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B5QW52_SALEP (tr|B5QW52) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B2V734_SULSY (tr|B2V734) Diaminopimelate epimerase OS=Sulfurihyd... 112 2e-23
B5JX79_9GAMM (tr|B5JX79) Diaminopimelate epimerase OS=gamma prot... 112 2e-23
D4GGN1_PANAM (tr|D4GGN1) Diaminopimelate epimerase OS=Pantoea an... 112 2e-23
B2H2N6_BURPS (tr|B2H2N6) Diaminopimelate epimerase OS=Burkholder... 112 2e-23
D2TCR7_ERWP6 (tr|D2TCR7) Diaminopimelate epimerase OS=Erwinia py... 112 2e-23
D0FMZ4_ERWPY (tr|D0FMZ4) Diaminopimelate epimerase OS=Erwinia py... 112 2e-23
B5XYK7_KLEP3 (tr|B5XYK7) Diaminopimelate epimerase OS=Klebsiella... 112 2e-23
D6GP91_9ENTR (tr|D6GP91) Diaminopimelate epimerase OS=Klebsiella... 112 2e-23
C8T0I1_KLEPR (tr|C8T0I1) Diaminopimelate epimerase OS=Klebsiella... 112 2e-23
C4WZT7_KLEPN (tr|C4WZT7) Diaminopimelate epimerase OS=Klebsiella... 112 2e-23
C0GG15_9FIRM (tr|C0GG15) Diaminopimelate epimerase OS=Dethiobact... 112 2e-23
A2UYN5_SHEPU (tr|A2UYN5) Diaminopimelate epimerase OS=Shewanella... 112 2e-23
D3RH88_KLEVT (tr|D3RH88) Diaminopimelate epimerase OS=Klebsiella... 112 2e-23
B5MTH3_SALET (tr|B5MTH3) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
B4ABF7_SALNE (tr|B4ABF7) Diaminopimelate epimerase OS=Salmonella... 112 2e-23
D2MKI6_9BACT (tr|D2MKI6) Diaminopimelate epimerase OS=Candidatus... 112 2e-23
Q5WDU2_BACSK (tr|Q5WDU2) Diaminopimelate epimerase OS=Bacillus c... 111 3e-23
D4Y9C0_BACTR (tr|D4Y9C0) Diaminopimelate epimerase OS=Geobacillu... 111 3e-23
C6QQE5_9BACI (tr|C6QQE5) Diaminopimelate epimerase OS=Geobacillu... 111 3e-23
A8ACV7_CITK8 (tr|A8ACV7) Diaminopimelate epimerase OS=Citrobacte... 111 3e-23
D3A2V0_NEISU (tr|D3A2V0) Diaminopimelate epimerase OS=Neisseria ... 111 3e-23
B8KKH4_9GAMM (tr|B8KKH4) Diaminopimelate epimerase OS=gamma prot... 111 4e-23
D5WP68_BACT2 (tr|D5WP68) Diaminopimelate epimerase OS=Bacillus t... 111 4e-23
B5FCR0_VIBFM (tr|B5FCR0) Diaminopimelate epimerase OS=Vibrio fis... 111 4e-23
C8QCW6_9ENTR (tr|C8QCW6) Diaminopimelate epimerase OS=Pantoea sp... 111 5e-23
C0Q3B8_SALPC (tr|C0Q3B8) Diaminopimelate epimerase OS=Salmonella... 110 5e-23
C1MG58_9ENTR (tr|C1MG58) Diaminopimelate epimerase OS=Citrobacte... 110 5e-23
D5CFU1_ENTCC (tr|D5CFU1) Diaminopimelate epimerase OS=Enterobact... 110 5e-23
D5B588_YERPZ (tr|D5B588) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
D0JTM9_YERP1 (tr|D0JTM9) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
D0JJK3_YERPD (tr|D0JJK3) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
D1U0N8_YERPE (tr|D1U0N8) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
D1Q5T5_YERPE (tr|D1Q5T5) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
D1Q3G8_YERPE (tr|D1Q3G8) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
C4HF22_YERPE (tr|C4HF22) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
B0HZE4_YERPE (tr|B0HZE4) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
B0HL25_YERPE (tr|B0HL25) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
B0H953_YERPE (tr|B0H953) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
B0GUK6_YERPE (tr|B0GUK6) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
B0GKM8_YERPE (tr|B0GKM8) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
A9ZZQ3_YERPE (tr|A9ZZQ3) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
A9ZC25_YERPE (tr|A9ZC25) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
A6BX28_YERPE (tr|A6BX28) Diaminopimelate epimerase OS=Yersinia p... 110 6e-23
D5W9V5_BURSC (tr|D5W9V5) Diaminopimelate epimerase OS=Burkholder... 110 6e-23
C6C7D1_DICDC (tr|C6C7D1) Diaminopimelate epimerase OS=Dickeya da... 110 6e-23
C3XD32_OXAFO (tr|C3XD32) Diaminopimelate epimerase OS=Oxalobacte... 110 6e-23
A6TGJ2_KLEP7 (tr|A6TGJ2) Diaminopimelate epimerase OS=Klebsiella... 110 6e-23
D4BE39_9ENTR (tr|D4BE39) Diaminopimelate epimerase OS=Citrobacte... 110 6e-23
A9CX84_9GAMM (tr|A9CX84) Diaminopimelate epimerase OS=Shewanella... 110 7e-23
C5TP14_NEIFL (tr|C5TP14) Diaminopimelate epimerase OS=Neisseria ... 110 7e-23
A3WKF2_9GAMM (tr|A3WKF2) Diaminopimelate epimerase OS=Idiomarina... 110 7e-23
D3VHZ7_XENNA (tr|D3VHZ7) Diaminopimelate epimerase OS=Xenorhabdu... 110 8e-23
C9Y4V6_CROTZ (tr|C9Y4V6) Diaminopimelate epimerase OS=Cronobacte... 110 8e-23
A8GZG9_SHEPA (tr|A8GZG9) Diaminopimelate epimerase OS=Shewanella... 110 9e-23
B0TJ49_SHEHH (tr|B0TJ49) Diaminopimelate epimerase OS=Shewanella... 110 9e-23
D0W4N6_NEICI (tr|D0W4N6) Diaminopimelate epimerase OS=Neisseria ... 110 9e-23
B6VLR4_PHOAA (tr|B6VLR4) Diaminopimelate epimerase OS=Photorhabd... 110 1e-22
C9NLU7_9VIBR (tr|C9NLU7) Diaminopimelate epimerase OS=Vibrio cor... 110 1e-22
D6KXY5_9NEIS (tr|D6KXY5) Diaminopimelate epimerase OS=Simonsiell... 110 1e-22
C0EJP0_NEIFL (tr|C0EJP0) Diaminopimelate epimerase OS=Neisseria ... 110 1e-22
D5D586_ECOKI (tr|D5D586) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D3QXA1_ECOCB (tr|D3QXA1) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D3H421_ECO44 (tr|D3H421) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C9QWE3_ECOD1 (tr|C9QWE3) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C8UJJ1_ECO1A (tr|C8UJJ1) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C8TYP7_ECO10 (tr|C8TYP7) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C8TL08_ECO26 (tr|C8TL08) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C6UZU7_ECO5T (tr|C6UZU7) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C6UIQ4_ECOBR (tr|C6UIQ4) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C6EG05_ECOBD (tr|C6EG05) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C5WB43_ECOBB (tr|C5WB43) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D7JVR8_ECOLX (tr|D7JVR8) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D6JHC4_ECOLX (tr|D6JHC4) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D6IWP4_ECOLX (tr|D6IWP4) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D6I365_ECOLX (tr|D6I365) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B6ZPT7_ECO57 (tr|B6ZPT7) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3XGF8_ECOLX (tr|B3XGF8) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3WQU6_ECOLX (tr|B3WQU6) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3IH21_ECOLX (tr|B3IH21) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3IAW8_ECOLX (tr|B3IAW8) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3HY99_ECOLX (tr|B3HY99) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3HAU8_ECOLX (tr|B3HAU8) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3C0S4_ECO57 (tr|B3C0S4) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3BGA0_ECO57 (tr|B3BGA0) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3B7J6_ECO57 (tr|B3B7J6) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3ALM4_ECO57 (tr|B3ALM4) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B3A0Z3_ECO57 (tr|B3A0Z3) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B2PK61_ECO57 (tr|B2PK61) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B2P8D9_ECO57 (tr|B2P8D9) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B2NTP2_ECO57 (tr|B2NTP2) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D4C3Z6_PRORE (tr|D4C3Z6) Diaminopimelate epimerase OS=Providenci... 109 1e-22
Q3YVF7_SHISS (tr|Q3YVF7) Diaminopimelate epimerase OS=Shigella s... 109 1e-22
Q329Y5_SHIDS (tr|Q329Y5) Diaminopimelate epimerase OS=Shigella d... 109 1e-22
Q31UH9_SHIBS (tr|Q31UH9) Diaminopimelate epimerase OS=Shigella b... 109 1e-22
Q1R4C5_ECOUT (tr|Q1R4C5) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D2NDM9_ECOS5 (tr|D2NDM9) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B6I4F0_ECOSE (tr|B6I4F0) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
A1AHX7_ECOK1 (tr|A1AHX7) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
D6IG44_ECOLX (tr|D6IG44) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C3SKE2_ECOLX (tr|C3SKE2) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C1NGC4_9ESCH (tr|C1NGC4) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
C1HTK1_9ESCH (tr|C1HTK1) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
B2N5E6_ECOLX (tr|B2N5E6) Diaminopimelate epimerase OS=Escherichi... 109 1e-22
Q83PH3_SHIFL (tr|Q83PH3) Diaminopimelate epimerase OS=Shigella f... 109 1e-22
D2ABY2_SHIF2 (tr|D2ABY2) Diaminopimelate epimerase OS=Shigella f... 109 1e-22
C4S2H1_YERBE (tr|C4S2H1) Diaminopimelate epimerase OS=Yersinia b... 109 1e-22
A9KJ18_CLOPH (tr|A9KJ18) Diaminopimelate epimerase OS=Clostridiu... 109 1e-22
B3X3W8_SHIDY (tr|B3X3W8) Diaminopimelate epimerase OS=Shigella d... 109 1e-22
D2BYP5_DICD5 (tr|D2BYP5) Diaminopimelate epimerase OS=Dickeya da... 109 1e-22
B5WTK7_9BURK (tr|B5WTK7) Diaminopimelate epimerase OS=Burkholder... 109 1e-22
D3RDI8_KLEVT (tr|D3RDI8) Diaminopimelate epimerase OS=Klebsiella... 109 1e-22
Q5F9Q4_NEIG1 (tr|Q5F9Q4) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
B4RK32_NEIG2 (tr|B4RK32) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
D6JNA0_NEIGO (tr|D6JNA0) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
D1E7P4_NEIGO (tr|D1E7P4) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
D1DUT3_NEIGO (tr|D1DUT3) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
D1DHW1_NEIGO (tr|D1DHW1) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
D1DBI9_NEIGO (tr|D1DBI9) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
D1D4K7_NEIGO (tr|D1D4K7) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
C1HW98_NEIGO (tr|C1HW98) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
B2Q4N0_PROST (tr|B2Q4N0) Diaminopimelate epimerase OS=Providenci... 109 1e-22
C4SGC0_YERMO (tr|C4SGC0) Diaminopimelate epimerase OS=Yersinia m... 109 1e-22
D1EE37_NEIGO (tr|D1EE37) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
D1E1B7_NEIGO (tr|D1E1B7) Diaminopimelate epimerase OS=Neisseria ... 109 1e-22
C8PV24_9GAMM (tr|C8PV24) Diaminopimelate epimerase OS=Enhydrobac... 109 1e-22
B5XWW5_KLEP3 (tr|B5XWW5) Putative diaminopimelate epimerase OS=K... 109 2e-22
D6GCP5_9ENTR (tr|D6GCP5) Diaminopimelate epimerase OS=Klebsiella... 109 2e-22
C4SRG5_YERFR (tr|C4SRG5) Diaminopimelate epimerase OS=Yersinia f... 109 2e-22
B8KSV1_9GAMM (tr|B8KSV1) Diaminopimelate epimerase OS=gamma prot... 109 2e-22
D4ICJ0_ERWAE (tr|D4ICJ0) Diaminopimelate epimerase OS=Erwinia am... 109 2e-22
D4HUK9_ERWAC (tr|D4HUK9) Diaminopimelate epimerase OS=Erwinia am... 109 2e-22
D0KBL9_PECWW (tr|D0KBL9) Diaminopimelate epimerase OS=Pectobacte... 109 2e-22
D2ZMD0_9ENTR (tr|D2ZMD0) Diaminopimelate epimerase OS=Enterobact... 109 2e-22
D1P2X2_9ENTR (tr|D1P2X2) Diaminopimelate epimerase OS=Providenci... 108 2e-22
C3WCK5_FUSMR (tr|C3WCK5) Diaminopimelate epimerase OS=Fusobacter... 108 2e-22
A3EPU4_9BACT (tr|A3EPU4) Diaminopimelate epimerase OS=Leptospiri... 108 2e-22
D6HB90_NEIGO (tr|D6HB90) Diaminopimelate epimerase OS=Neisseria ... 108 2e-22
D1DN03_NEIGO (tr|D1DN03) Diaminopimelate epimerase OS=Neisseria ... 108 2e-22
Q1YSU8_9GAMM (tr|Q1YSU8) Diaminopimelate epimerase OS=gamma prot... 108 2e-22
D0IMG8_9VIBR (tr|D0IMG8) Diaminopimelate epimerase OS=Vibrio sp.... 108 2e-22
C2DY94_ECOLX (tr|C2DY94) Diaminopimelate epimerase OS=Escherichi... 108 3e-22
D6DP58_ENTCL (tr|D6DP58) Diaminopimelate epimerase OS=Enterobact... 108 3e-22
C9X0F3_NEIM8 (tr|C9X0F3) Diaminopimelate epimerase OS=Neisseria ... 108 3e-22
A9M3J3_NEIM0 (tr|A9M3J3) Diaminopimelate epimerase OS=Neisseria ... 108 3e-22
C4T339_YERIN (tr|C4T339) Diaminopimelate epimerase OS=Yersinia i... 108 4e-22
D1RNA9_SEROD (tr|D1RNA9) Diaminopimelate epimerase 1 OS=Serratia... 107 4e-22
D1JXU5_9BACE (tr|D1JXU5) Diaminopimelate epimerase OS=Bacteroide... 107 5e-22
C3PYN3_9BACE (tr|C3PYN3) Diaminopimelate epimerase OS=Bacteroide... 107 5e-22
D4E035_SEROD (tr|D4E035) Diaminopimelate epimerase OS=Serratia o... 107 5e-22
B6W4A1_9BACE (tr|B6W4A1) Diaminopimelate epimerase OS=Bacteroide... 107 5e-22
C3R4Z3_9BACE (tr|C3R4Z3) Diaminopimelate epimerase OS=Bacteroide... 107 6e-22
C4UTB7_YERRO (tr|C4UTB7) Diaminopimelate epimerase OS=Yersinia r... 107 6e-22
A1KT22_NEIMF (tr|A1KT22) Diaminopimelate epimerase OS=Neisseria ... 107 6e-22
B6AMF7_9BACT (tr|B6AMF7) Diaminopimelate epimerase OS=Leptospiri... 107 6e-22
B9E0X7_CLOK1 (tr|B9E0X7) Diaminopimelate epimerase OS=Clostridiu... 107 6e-22
A5N7G4_CLOK5 (tr|A5N7G4) Diaminopimelate epimerase OS=Clostridiu... 107 6e-22
D0Z995_EDWTE (tr|D0Z995) Diaminopimelate epimerase OS=Edwardsiel... 107 6e-22
D4V4I9_BACVU (tr|D4V4I9) Diaminopimelate epimerase OS=Bacteroide... 107 6e-22
>B9T434_RICCO (tr|B9T434) Diaminopimelate epimerase, putative OS=Ricinus communis
GN=RCOM_0294430 PE=3 SV=1
Length = 369
Score = 365 bits (936), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/187 (91%), Positives = 179/187 (95%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDSTEPR+TPEQAV+LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN
Sbjct: 100 VDNRDSTEPRITPEQAVRLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 159
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRL
Sbjct: 160 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLRE 219
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
NK DAVVK++LN+DG TWNVTCVSMGNPHCVTFG+ EN+DL VD LNLAEIGPKFEHH V
Sbjct: 220 NKGDAVVKAKLNIDGVTWNVTCVSMGNPHCVTFGSNENQDLQVDKLNLAEIGPKFEHHDV 279
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 280 FPARTNT 286
>D7TQF7_VITVI (tr|D7TQF7) Whole genome shotgun sequence of line PN40024,
scaffold_40.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00025612001 PE=4 SV=1
Length = 307
Score = 349 bits (896), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 164/187 (87%), Positives = 178/187 (95%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS+EP++TPEQAVKLCDRNFGIGADGVIFAMPG NGTDY+MRIFNSDGSEPEMCGN
Sbjct: 38 VDNRDSSEPKLTPEQAVKLCDRNFGIGADGVIFAMPGINGTDYTMRIFNSDGSEPEMCGN 97
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFIAELENL GKQSFT+HTGAGLIVPEIQ+DGKVKVDMG+PILKA DVPT+LPA
Sbjct: 98 GVRCFARFIAELENLHGKQSFTLHTGAGLIVPEIQDDGKVKVDMGKPILKALDVPTKLPA 157
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
NKD +VVKSELNVDG +WNVTCVSMGNPHCVTFGTK ++L VD LNLA+IGPKFEHHA+
Sbjct: 158 NKDQSVVKSELNVDGVSWNVTCVSMGNPHCVTFGTKGGQNLQVDELNLADIGPKFEHHAM 217
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 218 FPARTNT 224
>B9HCY9_POPTR (tr|B9HCY9) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_717427 PE=3 SV=1
Length = 314
Score = 337 bits (865), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 175/188 (93%), Gaps = 1/188 (0%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNRDS+EP++ PEQAVKLCDRNFGIGADGVIFA+PG NGTDY+MRIFNSDGSEPEMCGN
Sbjct: 44 LDNRDSSEPKIRPEQAVKLCDRNFGIGADGVIFALPGVNGTDYTMRIFNSDGSEPEMCGN 103
Query: 61 GVRCFARFIAELENLQGK-QSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
GVRCFARFIAELEN GK QSFT+HTGAGLIVPEIQEDG+VKVDMGEP+LKA++VPT+L
Sbjct: 104 GVRCFARFIAELENFHGKRQSFTVHTGAGLIVPEIQEDGQVKVDMGEPVLKAANVPTKLA 163
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
+NK+DAVVKSEL VDG TWNVTCVSMGNPHCVTFGTK +DL VD LNLA+IGPKFEHH
Sbjct: 164 SNKNDAVVKSELVVDGVTWNVTCVSMGNPHCVTFGTKGGEDLQVDALNLAQIGPKFEHHD 223
Query: 180 VFPARTNT 187
VFPARTNT
Sbjct: 224 VFPARTNT 231
>D7LUJ8_ARALY (tr|D7LUJ8) Diaminopimelate epimerase family protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_906748 PE=4 SV=1
Length = 362
Score = 333 bits (853), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 154/187 (82%), Positives = 170/187 (90%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS+EP++T EQA KLCDRNFG+GADGVIFAMPG NGTDY+MRIFNSDGSEPEMCGN
Sbjct: 93 VDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMPGVNGTDYAMRIFNSDGSEPEMCGN 152
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFIAELENLQGK SFTIHTGAGLIVPEIQ+DG+VKVDMG PILKA DVPT+LP
Sbjct: 153 GVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLPG 212
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
NK +AVV++EL VDGE+WNVTCVSMGNPHC+TFG K +L VD+LNL EIGPKFE H +
Sbjct: 213 NKGEAVVQAELVVDGESWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFERHEM 272
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 273 FPARTNT 279
>B9IGD7_POPTR (tr|B9IGD7) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_257863 PE=3 SV=1
Length = 281
Score = 331 bits (848), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 174/188 (92%), Gaps = 6/188 (3%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS+EP++TPEQA KLCDRNFGIGADGVIFA+PG NGTDY+MRIFNSDGSEPEMCGN
Sbjct: 16 VDNRDSSEPKITPEQAAKLCDRNFGIGADGVIFALPGINGTDYTMRIFNSDGSEPEMCGN 75
Query: 61 GVRCFARFIAELENLQGKQ-SFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
GVRCFARFIAE+ENL GK+ SF++HTGAGLIVPEIQEDGKVKVDMGEP+LKA+DVPT+L
Sbjct: 76 GVRCFARFIAEIENLHGKKLSFSVHTGAGLIVPEIQEDGKVKVDMGEPVLKAADVPTKLA 135
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
ANK+DAVVKSEL VDG TWNVTCVSMGNPHCVTFG DL VD+LNLA+IGPKFEHH
Sbjct: 136 ANKNDAVVKSELVVDGVTWNVTCVSMGNPHCVTFG-----DLQVDSLNLAQIGPKFEHHE 190
Query: 180 VFPARTNT 187
VFPARTNT
Sbjct: 191 VFPARTNT 198
>C6T990_SOYBN (tr|C6T990) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 359
Score = 321 bits (822), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 144/187 (77%), Positives = 170/187 (90%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNRDS+EP+++ E+AV+LCDRNFG+GADGVIF +PG +GTDY+MRIFNSDGSEPEMCGN
Sbjct: 90 IDNRDSSEPKISAEKAVQLCDRNFGVGADGVIFVLPGISGTDYTMRIFNSDGSEPEMCGN 149
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFA+F+++LENL G+ SFTIHTGAGLI+PE+ EDG V+VDMGEPILKASDVPT+L A
Sbjct: 150 GVRCFAKFVSQLENLHGRHSFTIHTGAGLIIPEVLEDGNVRVDMGEPILKASDVPTKLHA 209
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
NKD+AVVKSEL VDG W+VTCVSMGNPHCVTF + +++LLVD L LAEIGPKFEHH V
Sbjct: 210 NKDNAVVKSELVVDGVIWHVTCVSMGNPHCVTFSREGSQNLLVDELKLAEIGPKFEHHEV 269
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 270 FPARTNT 276
>C6TKD3_SOYBN (tr|C6TKD3) Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 359
Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 142/187 (75%), Positives = 169/187 (90%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNRD++EPR++ E+AV+LCDRNFG+GADGVIF +PG NGTDY+MRIFNSD SEPEMCGN
Sbjct: 90 IDNRDTSEPRISAEKAVQLCDRNFGVGADGVIFVLPGINGTDYTMRIFNSDSSEPEMCGN 149
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFA+F+++LENL G+ SFTIHTGAGLI+PE+ EDG V+VDMGEP+LKA DVPT+LPA
Sbjct: 150 GVRCFAKFVSQLENLHGRHSFTIHTGAGLIIPEVLEDGNVRVDMGEPVLKALDVPTKLPA 209
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
NKD+AVVKS+L VDG W+VTCVSMGNPHCVTF + +++LLVD L LAEIGPKFEHH V
Sbjct: 210 NKDNAVVKSQLVVDGVIWHVTCVSMGNPHCVTFSREGSQNLLVDELKLAEIGPKFEHHEV 269
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 270 FPARTNT 276
>D2DKE8_SOYBN (tr|D2DKE8) Diaminopimelate epimerase OS=Glycine max PE=2 SV=1
Length = 359
Score = 317 bits (812), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 142/187 (75%), Positives = 168/187 (89%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNRDS+EP+++ E+AV+LCDRNFG+GADGVIF +PG +GTDY+MRIFNSDGSEPEMCGN
Sbjct: 90 IDNRDSSEPKISAEKAVQLCDRNFGVGADGVIFVLPGISGTDYTMRIFNSDGSEPEMCGN 149
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFA+F+++LENL G+ SFTIHTGAGLI+PE+ EDG V+VDMGEPILK DVPT+L A
Sbjct: 150 GVRCFAKFVSQLENLHGRHSFTIHTGAGLIIPEVLEDGNVRVDMGEPILKXXDVPTKLHA 209
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
NKD+AVVKSEL VDG W+VTCVSMGNPHCVTF + +++LLVD L LAEIGPKFEHH V
Sbjct: 210 NKDNAVVKSELVVDGVIWHVTCVSMGNPHCVTFSREGSQNLLVDELKLAEIGPKFEHHEV 269
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 270 FPARTNT 276
>B4F833_MAIZE (tr|B4F833) Diaminopimelate epimerase OS=Zea mays PE=2 SV=1
Length = 352
Score = 313 bits (802), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 143/187 (76%), Positives = 162/187 (86%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS+ P+VTPE+A KLCDRNFGIGADGVIF MPG N DY+MRIFNSDGSEPEMCGN
Sbjct: 83 VDNRDSSVPKVTPEEAAKLCDRNFGIGADGVIFVMPGVNDADYTMRIFNSDGSEPEMCGN 142
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFI ELENLQG SFTIHTGAG I+PEIQ DG+VKVDMGEPIL +D+PT+L A
Sbjct: 143 GVRCFARFIGELENLQGTHSFTIHTGAGKIIPEIQSDGQVKVDMGEPILSGADIPTKLVA 202
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
K+ AV+++EL V+G TW+VTCVSMGNPHCVTFG E K L +D+L L+EIGPKFEHH +
Sbjct: 203 TKNKAVIQAELAVEGLTWHVTCVSMGNPHCVTFGANELKTLQIDDLKLSEIGPKFEHHEM 262
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 263 FPARTNT 269
>B4FVI8_MAIZE (tr|B4FVI8) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 353
Score = 313 bits (801), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 162/187 (86%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS+ P+VTPE+A KLCDRNFGIGADGVIF MPG NG DY+MRIFNSDGSEPEMCGN
Sbjct: 84 VDNRDSSVPKVTPEEAAKLCDRNFGIGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGN 143
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFIAE+ENLQG FTIHTGAG IVPEIQ DG+VKVDMGEPIL D+PT+L A
Sbjct: 144 GVRCFARFIAEIENLQGTNRFTIHTGAGKIVPEIQSDGQVKVDMGEPILSGLDIPTKLLA 203
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
K+ AVV++EL V+G TW+VTCVSMGNPHCVTFG E K L VD+L L+EIGPKFEHH +
Sbjct: 204 TKNKAVVQAELAVEGLTWHVTCVSMGNPHCVTFGANELKVLQVDDLKLSEIGPKFEHHEM 263
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 264 FPARTNT 270
>B4FQ56_MAIZE (tr|B4FQ56) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 308
Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/187 (78%), Positives = 162/187 (86%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS+ P+VTPE+A KLCDRNFGIGADGVIF MPG NG DY+MRIFNSDGSEPEMCGN
Sbjct: 39 VDNRDSSVPKVTPEEAAKLCDRNFGIGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGN 98
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFIAE+ENLQG FTIHTGAG IVPEIQ DG+VKVDMGEPIL D+PT+L A
Sbjct: 99 GVRCFARFIAEIENLQGTNRFTIHTGAGKIVPEIQSDGQVKVDMGEPILSGLDIPTKLLA 158
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
K+ AVV++EL V+G TW+VTCVSMGNPHCVTFG E K L VD+L L+EIGPKFEHH +
Sbjct: 159 TKNKAVVQAELAVEGLTWHVTCVSMGNPHCVTFGANELKVLQVDDLKLSEIGPKFEHHEM 218
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 219 FPARTNT 225
>C4J3L7_MAIZE (tr|C4J3L7) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 350
Score = 307 bits (787), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 145/187 (77%), Positives = 161/187 (86%), Gaps = 3/187 (1%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS+ P+VTPE+A KLCDRNFGIGADGVIF MPG NG DY+MRIFNSDGSEPEMCGN
Sbjct: 84 VDNRDSSVPKVTPEEAAKLCDRNFGIGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGN 143
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFIAE+ENLQG FTIHTGAG IVPEIQ DG+VKVDMGEPIL D+PT+L A
Sbjct: 144 GVRCFARFIAEIENLQGTNRFTIHTGAGKIVPEIQSDGQVKVDMGEPILSGLDIPTKLLA 203
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
K+ AVV++EL V+G TW+VTCVSMGNPHCVTFG E L VD+L L+EIGPKFEHH +
Sbjct: 204 TKNKAVVQAELAVEGLTWHVTCVSMGNPHCVTFGANE---LKVDDLKLSEIGPKFEHHEM 260
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 261 FPARTNT 267
>B8LLS8_PICSI (tr|B8LLS8) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 375
Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 135/187 (72%), Positives = 158/187 (84%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS EP+++PEQA+KLCDRNFG+GADGVIFAMPG NGTDYSMRIFNSDGSEPEMCGN
Sbjct: 106 VDNRDSLEPKISPEQAIKLCDRNFGVGADGVIFAMPGVNGTDYSMRIFNSDGSEPEMCGN 165
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
G+RC A F+AELEN QS+ IHT AGLIVP++ EDGKV VDMG+PIL A+++PT+LP
Sbjct: 166 GIRCMACFVAELENSPRPQSYRIHTRAGLIVPKLLEDGKVMVDMGQPILTAANIPTKLPK 225
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
+D AVVK+EL VDG+ W VTCVSMGNPHCVTF K+ + L V++L L IGP FEHH +
Sbjct: 226 REDGAVVKAELPVDGKIWIVTCVSMGNPHCVTFSRKDCEVLDVNSLTLEHIGPLFEHHEM 285
Query: 181 FPARTNT 187
FPARTNT
Sbjct: 286 FPARTNT 292
>C5YPW9_SORBI (tr|C5YPW9) Putative uncharacterized protein Sb08g018560 OS=Sorghum
bicolor GN=Sb08g018560 PE=4 SV=1
Length = 425
Score = 244 bits (623), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/244 (54%), Positives = 154/244 (63%), Gaps = 61/244 (25%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNRDS P+VTPE+AVKLCDRNFGIGADGVIF MPG NG DY+++IFNSDGSEPEMCGN
Sbjct: 104 VDNRDSWVPKVTPEEAVKLCDRNFGIGADGVIFVMPGVNGADYNIKIFNSDGSEPEMCGN 163
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFARFIAE+ENLQG SFTIHTGAG I+PE+Q DG+VKVDM E I D+PT+L A
Sbjct: 164 GVRCFARFIAEIENLQGTNSFTIHTGAGKIIPEMQSDGQVKVDMDEHIPSGPDIPTKLLA 223
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENK--------------------- 159
K+ AVV+++L V+G W+VTCVSMG VTFG KE K
Sbjct: 224 TKNKAVVQAKLVVEGLPWHVTCVSMG----VTFGAKEVKVKVDMGEPILSGPGIPTKLLA 279
Query: 160 ---------DLLVDNL---------------------------NLAEIGPKFEHHAVFPA 183
+L V+ L ++IGPKFE H +FPA
Sbjct: 280 TKNKAAVQAELAVEGLTWHVTCVSMGNPHCVTFGAKELKVDDLKFSKIGPKFERHEMFPA 339
Query: 184 RTNT 187
RTNT
Sbjct: 340 RTNT 343
>Q3M8I9_ANAVT (tr|Q3M8I9) Diaminopimelate epimerase OS=Anabaena variabilis
(strain ATCC 29413 / PCC 7937) GN=Ava_3088 PE=3 SV=1
Length = 282
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 140/188 (74%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR S P +TPE+AV++CDR+FGIGADGVIFA+PG NGTDY+MRIFNSDGSEPEMCGN
Sbjct: 21 IDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENGTDYTMRIFNSDGSEPEMCGN 80
Query: 61 GVRCFARFIAELENL-QGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC A F+A+LE L + K ++ IHT AG+I P++ DG++KVDMG P L A ++PT +
Sbjct: 81 GIRCLAAFLADLEGLSRNKDTYRIHTLAGVITPQLTPDGQIKVDMGLPRLLAGEIPTNI- 139
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
A D V+ L V+G+TW VTCVSMGNPHC+TF V + L IGPKFEHH
Sbjct: 140 AAADQKVINQPLEVEGKTWEVTCVSMGNPHCITFVED------VAAIPLETIGPKFEHHP 193
Query: 180 VFPARTNT 187
FP RTNT
Sbjct: 194 AFPQRTNT 201
>A0YIC3_LYNSP (tr|A0YIC3) Diaminopimelate epimerase OS=Lyngbya sp. (strain PCC
8106) GN=dapF PE=3 SV=1
Length = 284
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 142/194 (73%), Gaps = 14/194 (7%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR +EP +TPEQA+++CDRNFGIGADGVIFA+PGT+ TDY+MRIFNSD SEP+MCGN
Sbjct: 18 IDNRHQSEPLITPEQAMQMCDRNFGIGADGVIFALPGTSNTDYTMRIFNSDSSEPQMCGN 77
Query: 61 GVRCFARFIAELENLQGK-------QSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASD 113
G+RC A+FIA+LE+ GK S+ I T AG+I PEI DG+VKVDMG+P L A +
Sbjct: 78 GIRCLAKFIADLEHRDGKINQIPSSVSYKIDTLAGVITPEILADGQVKVDMGQPRLLAVE 137
Query: 114 VPTRLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGP 173
+PT L D+ VV L+V ++W VTCVSMGNPHC+TF V + LAEIGP
Sbjct: 138 IPTTL-TKADEKVVNVPLSVAEQSWKVTCVSMGNPHCITFVED------VAAIPLAEIGP 190
Query: 174 KFEHHAVFPARTNT 187
+FEHH FP RTNT
Sbjct: 191 QFEHHPAFPERTNT 204
>B4WKJ6_9SYNE (tr|B4WKJ6) Diaminopimelate epimerase OS=Synechococcus sp. PCC 7335
GN=S7335_1996 PE=3 SV=1
Length = 271
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 138/191 (72%), Gaps = 11/191 (5%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR S P VTPEQAV +CDRNFGIGADGVIF +PG G DYSMRI+NSDGSEPEMCGN
Sbjct: 1 MDNRASETPMVTPEQAVDVCDRNFGIGADGVIFVLPGKEGADYSMRIYNSDGSEPEMCGN 60
Query: 61 GVRCFARFIAELENLQGK----QSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPT 116
G+RC A+FIA+LE + +S+ +HT AG+I PE++ DG+V VDMGEPIL A ++PT
Sbjct: 61 GIRCLAKFIADLEEEHNEPTLPKSYGVHTLAGIIRPELKPDGQVTVDMGEPILTAREIPT 120
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFE 176
L D V+ L V GE W VTCVSMGNPHC+TF V+ + LA+IGP+FE
Sbjct: 121 TL-GQPDGKVIDETLTVAGENWQVTCVSMGNPHCITFVDD------VEAVPLADIGPRFE 173
Query: 177 HHAVFPARTNT 187
HH FPAR NT
Sbjct: 174 HHEAFPARINT 184
>A0ZFP0_NODSP (tr|A0ZFP0) Diaminopimelate epimerase OS=Nodularia spumigena
CCY9414 GN=dapF PE=3 SV=1
Length = 279
Score = 233 bits (594), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 137/188 (72%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNR S+ P +TPEQA++LCDR+FGIGADGVIFA+PG NG DY+MRIFNSDGSEPEMCGN
Sbjct: 18 VDNRASSLPVLTPEQAIQLCDRHFGIGADGVIFALPGENGADYTMRIFNSDGSEPEMCGN 77
Query: 61 GVRCFARFIAELEN-LQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC RFIA+LE + K S+ IHT AG+I P++ DG+VKVDMG P L A ++PT L
Sbjct: 78 GIRCLGRFIADLEGESRNKDSYRIHTLAGMITPQLMADGQVKVDMGLPRLLAGEIPTTL- 136
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
+ V+ L V G+TW VTCVSMGNPHC+TF + V + L IGP+FEHH
Sbjct: 137 GTAETKVINQPLEVAGQTWEVTCVSMGNPHCITFVSD------VAAIPLEIIGPQFEHHP 190
Query: 180 VFPARTNT 187
FP R NT
Sbjct: 191 AFPQRINT 198
>B1WRQ3_CYAA5 (tr|B1WRQ3) Diaminopimelate epimerase OS=Cyanothece sp. (strain
ATCC 51142) GN=dapF PE=3 SV=1
Length = 290
Score = 231 bits (589), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 145/188 (77%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNR S+ P ++P++AVKLCDR+FGIGADGVIFA+PG + +DY+MRIFNSDGSEP+MCGN
Sbjct: 28 VDNRHSSTPLLSPDEAVKLCDRHFGIGADGVIFALPGDDQSDYTMRIFNSDGSEPQMCGN 87
Query: 61 GVRCFARFIAELENLQG-KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC ARF+A+LE ++ +S+ I T AG+I+P ++E+G+VKVDMG P L A ++PT L
Sbjct: 88 GIRCLARFLAKLEGVETVGKSYRIQTLAGIIIPRLEEEGQVKVDMGNPFLLAKEIPTTL- 146
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
++ V+ L V G++W+VTCVSMGNPHC+TF EN V + L IGP FEHH+
Sbjct: 147 TKGEEKVINQFLEVGGQSWSVTCVSMGNPHCITF--VEN----VATIPLETIGPMFEHHS 200
Query: 180 VFPARTNT 187
VFP RTNT
Sbjct: 201 VFPERTNT 208
>Q01DU1_OSTTA (tr|Q01DU1) Homology to unknown gene OS=Ostreococcus tauri
GN=Ot02g06370 PE=3 SV=1
Length = 327
Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 143/196 (72%), Gaps = 10/196 (5%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTD--YSMRIFNSDGSEPEMC 58
+DNR S VT EQA K+CDRNFGIGADG+IFAMP GTD YSMR+FNSDGSEPEMC
Sbjct: 50 IDNRASDAVPVTAEQAAKMCDRNFGIGADGLIFAMPARPGTDEDYSMRMFNSDGSEPEMC 109
Query: 59 GNGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRL 118
GNG+RC ARF+++++ + + + T AGLI PE++ DG+V VDMG+P+L+ ++VPT+L
Sbjct: 110 GNGIRCLARFVSDVDG-SAPRKYKVWTLAGLIQPELRADGQVAVDMGKPVLEPANVPTKL 168
Query: 119 PANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKD-------LLVDNLNLAEI 171
A KD A V+ E+++DGE W VT VSMGNPHCVTFG + + L V++ L+
Sbjct: 169 AATKDSAAVRCEMDIDGEKWLVTAVSMGNPHCVTFGRAGDGELGADGPGLKVEDFALSTY 228
Query: 172 GPKFEHHAVFPARTNT 187
GPKFE H FPARTNT
Sbjct: 229 GPKFESHVNFPARTNT 244
>Q4C9K0_CROWT (tr|Q4C9K0) Diaminopimelate epimerase OS=Crocosphaera watsonii WH
8501 GN=dapF PE=3 SV=1
Length = 278
Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 140/188 (74%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNR ST P ++PE+AVKLCDR+FGIGADGVIFA+PG +DY+MRIFNSDGSEP+MCGN
Sbjct: 16 VDNRHSTTPSLSPEEAVKLCDRHFGIGADGVIFALPGDENSDYTMRIFNSDGSEPQMCGN 75
Query: 61 GVRCFARFIAELENL-QGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC ARF+A+LE + ++S+ I T AG+I+P ++ +G+VKVDMG P L A ++PT L
Sbjct: 76 GIRCLARFLAKLEGIDTTEKSYRIQTLAGIIIPNLEAEGQVKVDMGTPFLLAKEIPTTL- 134
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
++ V+ L V ++W VTCVSMGNPHC+TF V + L IGPKFEHHA
Sbjct: 135 TKAEEKVIDQSLEVGDQSWLVTCVSMGNPHCITFVED------VAKIPLETIGPKFEHHA 188
Query: 180 VFPARTNT 187
VFP RTNT
Sbjct: 189 VFPERTNT 196
>A8J8B3_CHLRE (tr|A8J8B3) Diaminopimelate epimerase OS=Chlamydomonas reinhardtii
GN=DAE1 PE=3 SV=1
Length = 318
Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 144/189 (76%), Gaps = 4/189 (2%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNR ++EP VTPEQAVK+CDRNFGIG DGVIFA+P TD +MRIFNSDGSEPEMCGN
Sbjct: 47 VDNRHTSEPVVTPEQAVKICDRNFGIGGDGVIFALPPVGDTDLTMRIFNSDGSEPEMCGN 106
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
G+RC A+F+++++N + + IHT AGLI PE+ DG+V+VDMG PIL+ VPT L
Sbjct: 107 GIRCLAKFVSDIDN-AAPRKYKIHTLAGLIQPEMLADGQVRVDMGTPILEGPKVPTTLAP 165
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN--LAEIGPKFEHH 178
+ VV+ +L V+G+T+ VTCVSMGNPH V + + + + +D+L+ LA +GPKFE +
Sbjct: 166 TQGSTVVQQDLVVEGKTYKVTCVSMGNPHAVIYSC-DGEPIKIDDLDKELAALGPKFERN 224
Query: 179 AVFPARTNT 187
AVFPARTNT
Sbjct: 225 AVFPARTNT 233
>D7E3Y4_ANAAZ (tr|D7E3Y4) Diaminopimelate epimerase OS='Nostoc azollae' 0708
GN=Aazo_1418 PE=4 SV=1
Length = 279
Score = 227 bits (579), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 134/187 (71%), Gaps = 8/187 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR S P +TP+QAVK CDR+FGIGADGVIFA+PG N TDY+MRIFNSDGSEPEMCGN
Sbjct: 18 IDNRSSLTPVITPQQAVKWCDRHFGIGADGVIFALPGQNDTDYTMRIFNSDGSEPEMCGN 77
Query: 61 GVRCFARFIAELENL-QGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC A F+ ELE + + K + IHT AG+I P++ DG+VKVDMG P L A ++PT
Sbjct: 78 GIRCLAAFLTELEGISRTKDYYRIHTLAGVITPQLTHDGQVKVDMGLPRLLAQEIPTTF- 136
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
A D+ V+ L V G TW+VTCVSMGNPHC+TF V + L +IGPKFEHH
Sbjct: 137 APADNKVINLPLEVAGTTWDVTCVSMGNPHCITFIED------VAAIPLEKIGPKFEHHP 190
Query: 180 VFPARTN 186
FP R N
Sbjct: 191 AFPQRIN 197
>A3IPP9_9CHRO (tr|A3IPP9) Diaminopimelate epimerase OS=Cyanothece sp. CCY0110
GN=dapF PE=3 SV=1
Length = 286
Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 142/191 (74%), Gaps = 14/191 (7%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNR + P ++ ++A+KLCDR+FGIGADGVIFA+PG TDY+MRIFNSDGSEP+MCGN
Sbjct: 16 VDNRHNAIPLLSSKEAIKLCDRHFGIGADGVIFALPGDENTDYTMRIFNSDGSEPQMCGN 75
Query: 61 GVRCFARFIAELENLQG-KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC ARF+A+LE ++ +S+ I T AG+++P ++EDG+VKVDMG P L A ++PT L
Sbjct: 76 GIRCLARFLAKLEGIETVGKSYRIQTLAGIMIPRLEEDGQVKVDMGNPFLLAKEIPTTL- 134
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFE 176
++ VV L V G++W+VTCVSMGNPHC+TF VDN+ L IGP FE
Sbjct: 135 TKGEEKVVNQFLEVGGQSWSVTCVSMGNPHCITF---------VDNVATIPLETIGPMFE 185
Query: 177 HHAVFPARTNT 187
HHAVFP RTNT
Sbjct: 186 HHAVFPERTNT 196
>A4RTF7_OSTLU (tr|A4RTF7) Predicted protein OS=Ostreococcus lucimarinus (strain
CCE9901) GN=OSTLU_35896 PE=3 SV=1
Length = 407
Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 141/192 (73%), Gaps = 6/192 (3%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGT-DYSMRIFNSDGSEPEMCG 59
+DNRDS +++ E A K+CDRNFGIG DGVIFAMP + + DYSMR+FNSDGSEPEMCG
Sbjct: 134 IDNRDSATVKMSSEAAAKMCDRNFGIGGDGVIFAMPPNDASEDYSMRMFNSDGSEPEMCG 193
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
NG+RC ARF+++L+ + K+ + + T AGLI PE++ DG+V VDMG PI + S+VPT L
Sbjct: 194 NGIRCLARFVSDLDAMPPKK-YKVGTLAGLIQPEMRADGQVAVDMGMPIFEPSEVPTTLA 252
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGT----KENKDLLVDNLNLAEIGPKF 175
A +D VV++E++VDGE W V VSMGNPHC+TFG + L +D L+ +GPKF
Sbjct: 253 ATQDGKVVRAEMDVDGEKWLVNAVSMGNPHCITFGRAGGEADGPGLKLDEFPLSVVGPKF 312
Query: 176 EHHAVFPARTNT 187
E H FPARTNT
Sbjct: 313 ESHPCFPARTNT 324
>C7QMM0_CYAP0 (tr|C7QMM0) Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC
8802) GN=dapF PE=3 SV=1
Length = 281
Score = 226 bits (577), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR S P V+PEQA+K+CDR+FGIGADGVIF +PGT TDY+MRIFNSDGSEP+MCGN
Sbjct: 18 IDNRSSHTPLVSPEQAIKMCDRHFGIGADGVIFVLPGTANTDYTMRIFNSDGSEPQMCGN 77
Query: 61 GVRCFARFIAELENLQG-KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC ARFIA LE + +++ I T AG+I P ++ G+VKVDMG P L A ++PT L
Sbjct: 78 GIRCLARFIAHLEGGETLGKTYQIDTLAGVISPRLEAQGQVKVDMGTPYLLAKEIPTTL- 136
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
N +D V+ L V G+TW VTCVSMGNPHC+TF KD V ++L +GP+FEHH
Sbjct: 137 GNSNDKVINHSLEVAGQTWLVTCVSMGNPHCITF----VKD--VWGIDLPTLGPQFEHHP 190
Query: 180 VFPARTNT 187
FP RTNT
Sbjct: 191 GFPERTNT 198
>D4TCL8_9NOST (tr|D4TCL8) Diaminopimelate epimerase OS=Cylindrospermopsis
raciborskii CS-505 GN=dapF PE=3 SV=1
Length = 279
Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 137/188 (72%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR P +TPE A+++CDR+FGIGADGVIFA+PG GTDY+MRIFNSDGSEPEMCGN
Sbjct: 18 IDNRCDLTPLITPEMAIRMCDRHFGIGADGVIFALPGQKGTDYTMRIFNSDGSEPEMCGN 77
Query: 61 GVRCFARFIAELENL-QGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC A F+ ELE + + K + IHT AG+I P++ +DG+V+VDMG P L A ++PT L
Sbjct: 78 GIRCLAAFLTELEGISRSKDYYLIHTLAGVIRPQLTDDGQVRVDMGSPRLLAQEIPTTL- 136
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
A + ++ L + +TW++TCVSMGNPHC+TF V ++ L IGP+FEHH
Sbjct: 137 APGNSKIINLPLEIGNQTWHITCVSMGNPHCITFVED------VASIPLEIIGPEFEHHP 190
Query: 180 VFPARTNT 187
VFP RTNT
Sbjct: 191 VFPQRTNT 198
>D4ZQS6_SPIPL (tr|D4ZQS6) Diaminopimelate epimerase OS=Arthrospira platensis
NIES-39 GN=dapF PE=3 SV=1
Length = 295
Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 136/188 (72%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR +EP T +QAV++CDR+FGIGADGVIFA+PG +DY+MRIFNSDGSEPEMCGN
Sbjct: 26 IDNRHQSEPICTQKQAVQMCDRHFGIGADGVIFALPGDGASDYTMRIFNSDGSEPEMCGN 85
Query: 61 GVRCFARFIAELENLQGKQ-SFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC A+FIAELE G ++ I+T AG+I P++ DG+VKVDMG P L A+++PT L
Sbjct: 86 GIRCLAKFIAELEGKTGTAIAYKINTAAGVICPQLLTDGQVKVDMGLPRLLAAEIPTTLS 145
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
N V+ L V G+ W+VTCVSMGNPHC+TF V ++ L EIGP FEHH
Sbjct: 146 ENSLK-VIDVPLQVAGQPWSVTCVSMGNPHCITFVDD------VASVPLTEIGPLFEHHP 198
Query: 180 VFPARTNT 187
FP RTNT
Sbjct: 199 AFPERTNT 206
>D7G034_ECTSI (tr|D7G034) Diaminopimelate epimerase OS=Ectocarpus siliculosus
GN=Esi_0391_0022 PE=4 SV=1
Length = 285
Score = 221 bits (562), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 130/187 (69%), Gaps = 7/187 (3%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
VDNR+ TEP +T E++ LCDR +GIG DGVIFA+PG++ DYSMRI NSDGSEPEMCGN
Sbjct: 22 VDNREETEPMLTAEESASLCDRRYGIGGDGVIFALPGSDEMDYSMRIINSDGSEPEMCGN 81
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
G+RC ARF+A+LE + K + IHT AG I+P +EDG V VDMG P L VP+ LP
Sbjct: 82 GIRCMARFLADLEG-KKKAEYKIHTLAGTIIPMAREDGLVTVDMGPPELNGPKVPSTLPT 140
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
N D V+K + VDG+ W VTCVSMGNPH V F VD L+L IGP+FE H
Sbjct: 141 NDDGVVLKEPIKVDGKDWEVTCVSMGNPHAVVFVPD------VDALDLPTIGPQFETHPS 194
Query: 181 FPARTNT 187
FPA+ NT
Sbjct: 195 FPAKINT 201
>C1E847_9CHLO (tr|C1E847) Predicted protein OS=Micromonas sp. RCC299
GN=MICPUN_59246 PE=3 SV=1
Length = 331
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 137/193 (70%), Gaps = 7/193 (3%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPG---TNGTDYSMRIFNSDGSEPEM 57
VDNRDS+E +++ E+ +LCDRNFGIGADGVIFAMP DYSMR++NSDG+EPEM
Sbjct: 57 VDNRDSSEIKLSSERCAQLCDRNFGIGADGVIFAMPPGLVQKDEDYSMRMYNSDGTEPEM 116
Query: 58 CGNGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTR 117
CGNG+RC A F+A+++ K ++ + T AGLI PE++ DG+V VDMGEP L VP
Sbjct: 117 CGNGIRCLANFVAKMDGADPK-AYKVGTLAGLIQPEVRADGQVSVDMGEPTLDPPKVPCT 175
Query: 118 LPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKD---LLVDNLNLAEIGPK 174
A +D A V++++ VDGETW VT VSMGNPHCVTFG + D + VD+ L+ GP
Sbjct: 176 FEATQDGAAVRAKMEVDGETWLVTAVSMGNPHCVTFGKEGECDEEGIKVDSFALSHYGPM 235
Query: 175 FEHHAVFPARTNT 187
FE H FPA+TNT
Sbjct: 236 FEKHPAFPAKTNT 248
>B5W4D7_SPIMA (tr|B5W4D7) Diaminopimelate epimerase OS=Arthrospira maxima CS-328
GN=dapF PE=3 SV=1
Length = 287
Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 134/188 (71%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR +EP T QAV++CDR+FGIGADGVIFA+PG +DY+MRIFNSDGSEPEMCGN
Sbjct: 18 IDNRHQSEPICTQRQAVQMCDRHFGIGADGVIFALPGDGASDYTMRIFNSDGSEPEMCGN 77
Query: 61 GVRCFARFIAELENLQGKQ-SFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC A+FI ELE G ++ I+T AG+I PE+ DG+VKVDMG P L A+++PT L
Sbjct: 78 GIRCLAKFITELEGKTGTAIAYKINTAAGVICPELLTDGQVKVDMGLPRLLAAEIPTTLS 137
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
N + V+ L V G+ +VTCVSMGNPHC+TF V ++ L EIGP FEHH
Sbjct: 138 EN-NLKVIDVPLEVAGQVLSVTCVSMGNPHCITFVDD------VASVPLTEIGPLFEHHP 190
Query: 180 VFPARTNT 187
FP RTNT
Sbjct: 191 AFPERTNT 198
>A8YK88_MICAE (tr|A8YK88) Diaminopimelate epimerase OS=Microcystis aeruginosa PCC
7806 GN=dapF PE=3 SV=1
Length = 281
Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 134/190 (70%), Gaps = 14/190 (7%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR S EP +TPE AV +CDR+FGIGADGVIFA+PG TDY+MRIFNSDGSEPEMCGN
Sbjct: 18 IDNRHSPEPLITPEIAVAMCDRHFGIGADGVIFALPGQAATDYTMRIFNSDGSEPEMCGN 77
Query: 61 GVRCFARFIAELE-NLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC A+FIA LE N +++ IHT AG I+P ++ + +V VDMG P L S++PT L
Sbjct: 78 GIRCLAQFIARLEANNTIGRTYRIHTLAGTIIPRLEANEQVTVDMGPPQLLGSEIPTTL- 136
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFE 176
+ V+ L V+G+ W +TCVSMGNPHCVTF VD+L L IGPKFE
Sbjct: 137 VKGSEKVLAVPLEVEGKDWLITCVSMGNPHCVTF---------VDDLASIPLETIGPKFE 187
Query: 177 HHAVFPARTN 186
HH VFP RTN
Sbjct: 188 HHPVFPQRTN 197
>A1KYM7_9CYAN (tr|A1KYM7) Diaminopimelate epimerase OS=cyanobacterium
endosymbiont of Rhopalodia gibba GN=dapF PE=3 SV=1
Length = 279
Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 134/188 (71%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+ NR S P V+PEQ+VK+CDR+FGIGADGVIFA+PG TDY+MRI N DGSEP+MCGN
Sbjct: 18 IHNRLSNSPLVSPEQSVKMCDRHFGIGADGVIFALPGIGNTDYTMRILNPDGSEPQMCGN 77
Query: 61 GVRCFARFIAELENLQG-KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC AR IA+LE + ++++IHT G+I P ++ +G+V+VDMG P L A ++PT L
Sbjct: 78 GIRCLARLIAQLEGGETLGKTYSIHTPTGVISPRLEAEGQVRVDMGTPYLFAHEIPTTL- 136
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
N ++ V+ L V G+ W VTCVSMGNPHC+TF + ++LA +G +FE+H
Sbjct: 137 GNPNETVINKPLAVAGKLWLVTCVSMGNPHCITFVEDASA------IDLAVLGLQFEYHQ 190
Query: 180 VFPARTNT 187
+FP R NT
Sbjct: 191 MFPERINT 198
>B7FIP6_MEDTR (tr|B7FIP6) Putative uncharacterized protein OS=Medicago truncatula
PE=2 SV=1
Length = 221
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 90/122 (73%), Positives = 111/122 (90%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNRDS+EP+++ E+AV+LCDRNFG+GADGVIF +PG +GTDY+MRIFNSDGSEPEMCGN
Sbjct: 92 IDNRDSSEPKISSEKAVQLCDRNFGVGADGVIFVLPGIDGTDYTMRIFNSDGSEPEMCGN 151
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
GVRCFA+F+++LE+L G+ SFTIHTGAG IVPE+ DG V+VDMGEP+LKASDVPT+L
Sbjct: 152 GVRCFAKFVSQLESLYGRHSFTIHTGAGKIVPEVLGDGNVRVDMGEPVLKASDVPTKLSP 211
Query: 121 NK 122
NK
Sbjct: 212 NK 213
>C1MZF9_MICPS (tr|C1MZF9) Predicted protein OS=Micromonas pusilla CCMP1545
GN=MICPUCDRAFT_44639 PE=3 SV=1
Length = 262
Score = 208 bits (529), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 128/180 (71%), Gaps = 12/180 (6%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGT---------DYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+CDRNFGIGADGVI AMP + DY+MR+FNSDG+EPEMCGNG+RC A F+
Sbjct: 1 MCDRNFGIGADGVIVAMPKGSAEYPGRVVEEEDYAMRMFNSDGTEPEMCGNGIRCLANFV 60
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
A +++ +++ + T AGLI PE + DG+V VDMG P L +DVPT+L A +D A VKS
Sbjct: 61 AAIDDAD-PRAYKVGTLAGLIQPECKPDGQVAVDMGVPTLTPADVPTKLAATEDGAAVKS 119
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTK--ENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++ VDG TW T VSMGNPHCVTFG + + K L VD+++LA IGP FE H FPARTNT
Sbjct: 120 QMTVDGATWLATAVSMGNPHCVTFGREKGDEKGLAVDDMDLAAIGPSFESHETFPARTNT 179
>D4TMN5_9NOST (tr|D4TMN5) Diaminopimelate epimerase OS=Raphidiopsis brookii D9
GN=CRD_00199 PE=3 SV=1
Length = 244
Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 124/170 (72%), Gaps = 8/170 (4%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL-QG 77
+CDR+FGIGADGVIFA+PG GTDY+MRIFNSDGSEPEMCGNG+RC A F+ ELE + +
Sbjct: 1 MCDRHFGIGADGVIFALPGQKGTDYTMRIFNSDGSEPEMCGNGIRCLAAFLTELEGISRS 60
Query: 78 KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGET 137
K + IHT AG+I P++ +DG+VKVDMG P L A ++PT L D V+ L + +T
Sbjct: 61 KDYYLIHTLAGIIRPQLTDDGQVKVDMGSPRLLAQEIPTTL-VPGDSKVINLPLEIGKQT 119
Query: 138 WNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
W++TCVSMGNPHC+TF V ++ + IGP+FEHH VFP RTNT
Sbjct: 120 WHITCVSMGNPHCITFVED------VASIPVEIIGPQFEHHPVFPQRTNT 163
>B7FV89_PHATR (tr|B7FV89) Predicted protein OS=Phaeodactylum tricornutum CCAP
1055/1 GN=PHATRDRAFT_34582 PE=3 SV=1
Length = 334
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 130/194 (67%), Gaps = 13/194 (6%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAM--PGTNGT----DYSMRIFNSDGSE 54
+D+RD +EP +TPE++ LC RNFGIG DGVIFA+ P +G D++MRI+NSDGSE
Sbjct: 59 IDDRDKSEPSLTPEESAMLCHRNFGIGGDGVIFALQPPSESGDGADFDFTMRIYNSDGSE 118
Query: 55 PEMCGNGVRCFARFIAEL-ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASD 113
PEMCGNG+RC A+F+ +L E+ ++ IHT AG IVP + EDG + VDMGEP L+A+
Sbjct: 119 PEMCGNGIRCMAQFLKDLGESKSDDGAYQIHTLAGRIVPVMNEDGTITVDMGEPFLEAAK 178
Query: 114 VPTRLPANKD-DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIG 172
VPT L AN + D+VV+ L +G+TW T V MGNPH + F KD ++ + G
Sbjct: 179 VPTTLEANAEHDSVVEQTLEANGKTWKCTAVGMGNPHAIFFVNDLEKD-----IDFEKDG 233
Query: 173 PKFEHHAVFPARTN 186
P E H FPA+TN
Sbjct: 234 PALEAHESFPAKTN 247
>D3EP27_UCYNA (tr|D3EP27) Diaminopimelate epimerase OS=cyanobacterium UCYN-A
GN=dapF PE=3 SV=1
Length = 279
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 129/188 (68%), Gaps = 8/188 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR S+E ++ Q +K+C+R+FGIGADGVIF + G +DY M IFNSDGSEPEMCGN
Sbjct: 16 IDNRSSSELLLSSGQILKMCNRHFGIGADGVIFLLSGDKVSDYGMHIFNSDGSEPEMCGN 75
Query: 61 GVRCFARFIAELENL-QGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
G+RC FI+ LEN Q + + I T AG+I E+Q +V+V+MG P+ +PT L
Sbjct: 76 GIRCLISFISNLENFEQTNKIYRIKTLAGIIKAELQTQTQVRVEMGTPLFLNKQIPTTL- 134
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
++KD+ V+ L ++ + W VTCV+MGNPHC+TF E+ +L +NL ++GP FE+H+
Sbjct: 135 SDKDNTVINYPLEIEKKNWLVTCVNMGNPHCITF--VEDTNL----INLEKLGPLFEYHS 188
Query: 180 VFPARTNT 187
FP R NT
Sbjct: 189 AFPERINT 196
>B8LBN1_THAPS (tr|B8LBN1) Diaminopimelate epimerase OS=Thalassiosira pseudonana
CCMP1335 GN=THAPSDRAFT_36614 PE=3 SV=1
Length = 323
Score = 177 bits (448), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 124/189 (65%), Gaps = 11/189 (5%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+D+RD PR+TPEQ+ +LC+RNFG+G DGVIFA+ D++MRI+NSDGSEPEMCGN
Sbjct: 54 IDDRDRETPRLTPEQSERLCNRNFGVGGDGVIFALKAPQDYDFTMRIYNSDGSEPEMCGN 113
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
G+RCFA+F+ +L + +S+ ++T AG IVPE+ D + VDMGEPIL VPT L
Sbjct: 114 GIRCFAQFLKDLG--EDAKSYKVNTLAGPIVPEMNPD-TITVDMGEPILDGPSVPTTLAP 170
Query: 121 NKDDAVVKSELNVD--GETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHH 178
N + V + +VD G+ W ++ VSMGNPH + F D L +++ A GP E
Sbjct: 171 NSEHNSVLEQTHVDKNGKEWKISAVSMGNPHAIIF-----VDDLEKDIDFAVDGPALESD 225
Query: 179 -AVFPARTN 186
FPA+TN
Sbjct: 226 TGAFPAKTN 234
>Q7NMF1_GLOVI (tr|Q7NMF1) Diaminopimelate epimerase OS=Gloeobacter violaceus
GN=dapF PE=3 SV=1
Length = 283
Score = 171 bits (433), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 115/190 (60%), Gaps = 13/190 (6%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+DNR + EP ++ E+A +CDR+FG+GADGVIF + G D+ MRI+N+DGSE +MCGN
Sbjct: 23 IDNRTAAEPVLSAEEAAAVCDRHFGVGADGVIFLLSAETGADFRMRIYNNDGSEAQMCGN 82
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
G+RC A F EL + + TGAGL+ ++ DG+V+VDMG P L A ++PT L A
Sbjct: 83 GIRCLAHFARELGMGGTGSGYRVETGAGLLNIDLLADGRVRVDMGPPHLLADEIPTTL-A 141
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNL---NLAEIGPKFEH 177
D V + + V G W VTCV+MGNPH V F VD L +L GP FE
Sbjct: 142 PADQKAVAASIPVGGVDWRVTCVNMGNPHAVVF---------VDELATVDLHRFGPLFER 192
Query: 178 HAVFPARTNT 187
FP R NT
Sbjct: 193 DRHFPERVNT 202
>C9LLL5_9FIRM (tr|C9LLL5) Diaminopimelate epimerase OS=Dialister invisus DSM
15470 GN=dapF PE=3 SV=1
Length = 283
Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 117/185 (63%), Gaps = 10/185 (5%)
Query: 3 NRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGV 62
N + + R ++ V +C+RNFGIGADG+IF +P T MRIFNSDGSE EMCGNG+
Sbjct: 25 NAMTMDIRPVVKKCVSICNRNFGIGADGIIFVLPSEKAT-LQMRIFNSDGSEAEMCGNGI 83
Query: 63 RCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANK 122
R FA++ EL L K F++ TGAG++ PE+ DGKV+VDMG P L +S++P +
Sbjct: 84 RAFAKWAHEL-GLVSKHHFSVETGAGILFPELLPDGKVRVDMGVPHLNSSEIP--VTGFG 140
Query: 123 DDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFP 182
D VV +L D T+ +TCVSMGNPHCV F +D ++L EIG + E A FP
Sbjct: 141 DGMVVNRKLTNDLHTYRITCVSMGNPHCVIFTDD------IDRISLEEIGSRLEADAHFP 194
Query: 183 ARTNT 187
+TN
Sbjct: 195 RKTNV 199
>C9KKR6_9FIRM (tr|C9KKR6) Diaminopimelate epimerase OS=Mitsuokella multacida DSM
20544 GN=dapF PE=3 SV=1
Length = 278
Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 119/177 (67%), Gaps = 16/177 (9%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A K+CDR++GIG DGV++ +P ++ D+ MRIFN+DGSE EMCGNG+RCFAR++ + L
Sbjct: 30 AKKVCDRHYGIGGDGVLYVLP-SDKADFRMRIFNTDGSEAEMCGNGIRCFARYLHDF-GL 87
Query: 76 QGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVP-TRLPANKDDAVVKSE 130
K+ FT+ TGAG++VP +Q E GK V+VDMGEP+L+ +P T N+ V++ +
Sbjct: 88 TEKEEFTVETGAGILVPRLQIEAGKVTGVRVDMGEPVLEGEKIPVTGFGMNR---VIEED 144
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ V G+T+ +TCVSMGNPHCV F + + E+G FE H FP +TNT
Sbjct: 145 IEVKGKTYKMTCVSMGNPHCVIFVED------AEAFPIYELGASFESHPAFPRKTNT 195
>A5GT84_SYNR3 (tr|A5GT84) Diaminopimelate epimerase OS=Synechococcus sp. (strain
RCC307) GN=dapF PE=3 SV=1
Length = 357
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 112/187 (59%), Gaps = 8/187 (4%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
+D R + P + + A +LCDR FGIG DG+I A+P G D M+I N+DGSE EMCGN
Sbjct: 32 MDGRTTPLPEMGGDPAKELCDRRFGIGGDGLILALPPQQGGDVRMQILNADGSEAEMCGN 91
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPA 120
G+RCFARF+A+L+ + + T AGL++P + E +V VDMGEP L+ + +PT L A
Sbjct: 92 GIRCFARFLADLDGSASGTQWRVETPAGLMIPRLLEGDQVTVDMGEPFLEPASIPTNLAA 151
Query: 121 NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAV 180
+ EL V G + V V MGNPH V + DL ++L+ +GP E H
Sbjct: 152 GT--PLPDGELQVAGISLQVAAVGMGNPHAVV----QVDDL--ESLDFDRLGPALEQHPA 203
Query: 181 FPARTNT 187
FPARTN
Sbjct: 204 FPARTNV 210
>B5IJR7_9CHRO (tr|B5IJR7) Diaminopimelate epimerase OS=Cyanobium sp. PCC 7001
GN=dapF PE=3 SV=1
Length = 394
Score = 159 bits (403), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 107/176 (60%), Gaps = 7/176 (3%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
+TPE+ +LCDR FGIGADG+I A P G + MRIFN+DGSEPEMCGNG+RC ARF+A
Sbjct: 46 LTPERIRRLCDRRFGIGADGLIVAAPPREGGELRMRIFNADGSEPEMCGNGIRCLARFLA 105
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
+ + + + + T AG IVPE+Q DG V+VDMG+P L VPT L D + +
Sbjct: 106 DSDGDLPGRRWQVETLAGRIVPELQPDGSVRVDMGQPFLAPETVPTTLEIG-DAGIPQGS 164
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
L GE++ V MGNPH V DL + ++L G E H FPARTN
Sbjct: 165 LEAAGESFQVGAAGMGNPHVVI----PVPDL--EAVDLERFGAALEVHPAFPARTN 214
>C9LXX1_9FIRM (tr|C9LXX1) Diaminopimelate epimerase OS=Selenomonas sputigena ATCC
35185 GN=dapF PE=3 SV=1
Length = 279
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 113/174 (64%), Gaps = 14/174 (8%)
Query: 18 KLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
++CDR++GIGADG+I +P + D+ MRIFN+DG+E EMCGNG+RCFA + E L G
Sbjct: 35 RVCDRHYGIGADGLILVLP-SQQADFRMRIFNADGTEAEMCGNGIRCFAG-VVHAEGLSG 92
Query: 78 KQSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKDDAVVKSELNV 133
+ FT+ TGAG++VP +Q G V+VDMGEPIL+ +P + V++ +
Sbjct: 93 EAEFTVETGAGILVPRLQLAGSRLTGVRVDMGEPILEGERIP--VLGFGASRVIEQPIEA 150
Query: 134 DGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+GET+++TCVSMGNPHCV F ++ +D+ ++ GP E H FP +TN
Sbjct: 151 EGETFSMTCVSMGNPHCVIF-VEDAQDVPMEKF-----GPLLERHEKFPKKTNV 198
>Q24TW0_DESHY (tr|Q24TW0) Diaminopimelate epimerase OS=Desulfitobacterium
hafniense (strain Y51) GN=dapF PE=3 SV=1
Length = 287
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 108/179 (60%), Gaps = 15/179 (8%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE A KLC R FG+G DG+I +P ++ D MRI NSDGSEPEMCGNG+RCFAR+I +
Sbjct: 34 PELARKLCHRQFGVGGDGLIMVLP-SDKADARMRILNSDGSEPEMCGNGIRCFARYIYD- 91
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKDDAVVK 128
+ K + T AG++ ++ G V+VDMGEPILK+ VP + + D VV
Sbjct: 92 QGYVSKNPLQVETLAGILTLQLSITGDQVTGVRVDMGEPILKSEQVPVLI---QGDPVVG 148
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ L+VDG+ + T VSMGNPHCV F + L+ IGP E H +FP +TN
Sbjct: 149 ARLDVDGQEFEFTAVSMGNPHCVLFVED------YETLDFERIGPAIEKHPLFPRKTNV 201
>Q0IAE7_SYNS3 (tr|Q0IAE7) Diaminopimelate epimerase OS=Synechococcus sp. (strain
CC9311) GN=dapF PE=3 SV=1
Length = 380
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P +LCDR FGIG DG+I A+P +G + MRIFN+DGSE EMCGNG+RC ARF+A+
Sbjct: 33 PNWVRQLCDRRFGIGGDGLILALPPEHGEELRMRIFNADGSEAEMCGNGIRCLARFLADS 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ Q +++ T AG+IVPE+ EDG+++VDMG+P L + VPT LP + + + E++
Sbjct: 93 DGDQPGRTWRTETMAGVIVPELCEDGQIRVDMGKPFLNSDQVPTNLPQGR-SGLPQGEID 151
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ G T + V MGNPH V ++ K + D G E ++FPA+TN
Sbjct: 152 LQGSTLQLAAVGMGNPH-VVVPVQDLKSIPFDAW-----GSALEVDSLFPAKTN 199
>A3YZK9_9SYNE (tr|A3YZK9) Diaminopimelate epimerase OS=Synechococcus sp. WH 5701
GN=WH5701_13100 PE=3 SV=1
Length = 388
Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 11/191 (5%)
Query: 1 VDNRDSTEPR----VTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPE 56
+D R++ +P+ + PE+ +CDR FG+GADGVI A+P + MRIFN+DGSE E
Sbjct: 24 LDGREAADPQELFGLDPERVRWICDRRFGVGADGVILALPPEGDGELRMRIFNADGSEAE 83
Query: 57 MCGNGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPT 116
MCGNG+RC ARF+A+ + +++ + T AG +VPE+ DG V+VDMGEP L VPT
Sbjct: 84 MCGNGIRCLARFLADSDGDPAGRTWQVETMAGRMVPELLADGMVRVDMGEPFLLPEQVPT 143
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFE 176
L A + + EL V+G + MGNPH V V+ ++L GP E
Sbjct: 144 TL-ATGPAGLPQGELEVEGARFAAAAAGMGNPHLVI------PVEEVEVVDLERFGPLLE 196
Query: 177 HHAVFPARTNT 187
H FPARTN
Sbjct: 197 RHPAFPARTNV 207
>D4S5H7_9FIRM (tr|D4S5H7) Diaminopimelate epimerase OS=Selenomonas noxia ATCC
43541 GN=dapF2 PE=3 SV=1
Length = 279
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 113/184 (61%), Gaps = 14/184 (7%)
Query: 8 EPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFAR 67
EP AV++CDR+FG+GADG++ P + D MR FN DG+EPEMCGNG+RCFAR
Sbjct: 22 EPVDFAALAVRMCDRHFGVGADGLMIVCP-SETADIRMREFNPDGTEPEMCGNGIRCFAR 80
Query: 68 FIAELENLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKD 123
+ + ++ ++ FTI T AG +VP I E G+ V+VDMGEP+L +P R
Sbjct: 81 CLYDCGRIR-REQFTIETIAGTMVPRILTESGEVTAVEVDMGEPVLAGDAIPVR--GFGM 137
Query: 124 DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPA 183
+ V+ + V+ T+ +TCVSMGNPHCV F + LAE+GPKFE+H FP
Sbjct: 138 EPVIAQPITVEDRTYAMTCVSMGNPHCVIFVDD------AEGFPLAELGPKFENHPAFPR 191
Query: 184 RTNT 187
R NT
Sbjct: 192 RINT 195
>A1HMY7_9FIRM (tr|A1HMY7) Diaminopimelate epimerase OS=Thermosinus
carboxydivorans Nor1 GN=dapF PE=3 SV=1
Length = 279
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/178 (47%), Positives = 111/178 (62%), Gaps = 14/178 (7%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
+ AVK+CDR+FGIGADG++ P + D+ MRIFNSDGSE EMCGN RC AR++ E
Sbjct: 28 QAAVKICDRHFGIGADGLVIVGP-SQVADFRMRIFNSDGSEAEMCGNVTRCVARYVYEY- 85
Query: 74 NLQGKQSFTIHTGAGLIVPE-IQEDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L K T+ T AG I PE I E+G V+VDMGEP LK + +P + D +
Sbjct: 86 GLTDKTKITLETLAGPIKPELIFENGVLRTVRVDMGEPRLKRAQIP--MIGEPDSEAINV 143
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
L V+ +T+++TCVSMGNPHC+ F VD +NLA +GP E+H FP +TN
Sbjct: 144 PLIVNDKTYDITCVSMGNPHCIIFVDD------VDEINLAAVGPLIENHPTFPRKTNV 195
>B1X3T5_PAUCH (tr|B1X3T5) Diaminopimelate epimerase OS=Paulinella chromatophora
GN=dapF PE=3 SV=1
Length = 376
Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 108/175 (61%), Gaps = 7/175 (4%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE LCDR+FG+GADGVI + T D+ MRIFN+DG+E +MCGNG+RC ++F+A+
Sbjct: 33 PEWVRHLCDRHFGVGADGVIIILSPTLEGDWRMRIFNADGTEAQMCGNGIRCISKFLADS 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ + + I T AG+IV E++E+ + VDMG PIL D+PTRL +D+ + +
Sbjct: 93 DKVMVGHKWKIETLAGIIVSELKENDMIYVDMGIPILSPHDIPTRLSVGQDNIAI-GLIE 151
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+G TW+V MGNPH V K+ +D +++ + GP E H FP +TN
Sbjct: 152 TNGITWSVAAAGMGNPHIV-IPVKDAED-----IDIEKFGPLLEEHFAFPTQTNV 200
>D5X7U3_THEPJ (tr|D5X7U3) Diaminopimelate epimerase OS=Thermincola potens (strain
JR) GN=dapF PE=3 SV=1
Length = 277
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 110/181 (60%), Gaps = 21/181 (11%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E AV+LC+R GIGADG++F +P + D MRIFN DGSEPEMCGN +RCFAR++ +
Sbjct: 29 ELAVRLCNRKTGIGADGLVFILP-SETADIQMRIFNPDGSEPEMCGNAIRCFARYLYD-H 86
Query: 74 NLQGKQSFTIHTGAGLIVPEIQE----DGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ KQ+ + T AG+ +P I E + V+VDMGEP L+ +P K VV
Sbjct: 87 GIVKKQTIRVETLAGIRIPRIIENPAGEALVEVDMGEPELERGRIPMLGGPGK---VVAE 143
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFEHHAVFPARTN 186
L V+G T+NVTCVSMGNPHCV F VDN +A IGP+ E H FP +TN
Sbjct: 144 PLPVNGSTYNVTCVSMGNPHCVIF---------VDNAEDYPVAAIGPRVETHTAFPNKTN 194
Query: 187 T 187
Sbjct: 195 V 195
>D1NN49_CLOTM (tr|D1NN49) Diaminopimelate epimerase OS=Clostridium thermocellum
JW20 GN=dapF PE=3 SV=1
Length = 280
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 112/179 (62%), Gaps = 17/179 (9%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A K+ DR+FGIG+DG++ MP + D+ MR+FNSDGSE EMCGN +RC +++ +
Sbjct: 28 EVAKKVSDRHFGIGSDGLVLIMP-SERADFKMRMFNSDGSEAEMCGNAIRCVGKYVFD-R 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K + T AG+ V E+ +DGK VKVDMGEPILK P +P N D + ++
Sbjct: 86 GMTNKNVIRVETLAGIKVLELTVQDGKAKLVKVDMGEPILK----PENIPVNSDKEIFRT 141
Query: 130 E-LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
E + +DG+ + VTCVSMGNPH V++ VD L +IGPK EHH +FP R N
Sbjct: 142 EPVEIDGKEFKVTCVSMGNPHAVSYVKN------VDIFPLEKIGPKMEHHPLFPKRINA 194
>C7HJ64_CLOTM (tr|C7HJ64) Diaminopimelate epimerase OS=Clostridium thermocellum
DSM 2360 GN=dapF PE=3 SV=1
Length = 280
Score = 150 bits (379), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 112/179 (62%), Gaps = 17/179 (9%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A K+ DR+FGIG+DG++ MP + D+ MR+FNSDGSE EMCGN +RC +++ +
Sbjct: 28 EVAKKVSDRHFGIGSDGLVLIMP-SERADFKMRMFNSDGSEAEMCGNAIRCVGKYVFD-R 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K + T AG+ V E+ +DGK VKVDMGEPILK P +P N D + ++
Sbjct: 86 GMTNKNVIRVETLAGIKVLELTVQDGKAKLVKVDMGEPILK----PENIPVNSDKEIFRT 141
Query: 130 E-LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
E + +DG+ + VTCVSMGNPH V++ VD L +IGPK EHH +FP R N
Sbjct: 142 EPVEIDGKEFKVTCVSMGNPHAVSYVKN------VDIFPLEKIGPKMEHHPLFPKRINA 194
>C8W080_DESAS (tr|C8W080) Diaminopimelate epimerase OS=Desulfotomaculum
acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644)
GN=dapF PE=3 SV=1
Length = 277
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 117/191 (61%), Gaps = 15/191 (7%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
V+ T P PE A ++C R FGIGADG++ + ++ D M+I NSDGSEPEMCGN
Sbjct: 16 VNAMTETLPADLPELARRVCHRYFGIGADGLVL-LHKSDAADLRMQIINSDGSEPEMCGN 74
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPE-IQEDGKVK---VDMGEPILKASDVPT 116
+RC A++ E +NL K + T AG+ +PE I E+G VK VDMGEPIL+ +++P
Sbjct: 75 AIRCVAKYAYE-QNLVKKTKIQVETLAGIKIPELILENGAVKFIRVDMGEPILERAEIPM 133
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFE 176
R A + V+ +LNV ET+ VT VSMGNPHC+ F + + ++ IGP+ E
Sbjct: 134 RGSAGR---VLAEDLNVGNETFKVTAVSMGNPHCLIFVDE------AVSFPVSLIGPQIE 184
Query: 177 HHAVFPARTNT 187
H VFP +TN
Sbjct: 185 IHEVFPRKTNV 195
>A5GL73_SYNPW (tr|A5GL73) Diaminopimelate epimerase OS=Synechococcus sp. (strain
WH7803) GN=dapF PE=3 SV=1
Length = 368
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 119/194 (61%), Gaps = 17/194 (8%)
Query: 1 VDNRDS--TEPRVTPEQ--AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPE 56
V+ RD +E V+P+ K+CDR FG+G DG+I A+P + MRIFN+DGSE E
Sbjct: 17 VEGRDGRLSESIVSPDSDWVRKICDRRFGLGGDGLILALPPQGQGELRMRIFNADGSEAE 76
Query: 57 MCGNGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPT 116
MCGNG+RC ARF+A+ + +S++I T AG+I+PE+Q+DG+++VDMG P LK VPT
Sbjct: 77 MCGNGIRCLARFLADSDGDSPGRSWSIETPAGMIIPELQQDGQIRVDMGAPFLKPEMVPT 136
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + + + E++ +G T ++ V MGNPH V + VD+L +G
Sbjct: 137 LLSPDA-KGLPRGEVSREGLTLSLAAVGMGNPHVV---------VPVDDLEAIPFEALGA 186
Query: 174 KFEHHAVFPARTNT 187
+ E +FPA+TN
Sbjct: 187 QLECDPLFPAKTNV 200
>Q05SY3_9SYNE (tr|Q05SY3) Diaminopimelate epimerase OS=Synechococcus sp. RS9916
GN=RS9916_29964 PE=3 SV=1
Length = 372
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P+ ++CDR FG+G DG+I A+P + MRIFN+DGSE EMCGNG+RC ARF+A+
Sbjct: 33 PQWVRRICDRRFGVGGDGIILALPPEGPGELRMRIFNADGSEAEMCGNGIRCLARFLADS 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ +S++I T AGLI+P +QEDG++KVDMG P+L VPT L A + + + EL
Sbjct: 93 DGDAPGRSWSIETPAGLIIPVLQEDGQIKVDMGAPMLAPDTVPTTL-AVGEQGLPQGELT 151
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++G+ V V MGNPH V DL ++ G E FPA+TN
Sbjct: 152 INGDLLKVAAVGMGNPHVVV----PVPDLA--SIPFDAWGAALEVDPSFPAKTNV 200
>A3Z6S8_9SYNE (tr|A3Z6S8) Diaminopimelate epimerase OS=Synechococcus sp. RS9917
GN=RS9917_12645 PE=3 SV=1
Length = 360
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P +LCDR FGIGADG+I A+P + MRIFN+DGSE EMCGNG+RC ARF+A+
Sbjct: 33 PAWVRRLCDRRFGIGADGLIVALPPAAAGELRMRIFNADGSEAEMCGNGIRCLARFLADS 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ +++ I T AGLI+P + DG+++VDMG P L+ VPT LP + + E+
Sbjct: 93 DGDASGRTWRIETAAGLIIPTLLADGQIQVDMGRPFLQPEQVPTALPVGA-AGLPQGEVE 151
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+DG + MGNPH V T ++ +D + G E +FPA+TN
Sbjct: 152 LDGRRLALAAAGMGNPHVVV--TVDD----LDQIPFERWGAALEVDPLFPAKTNV 200
>A4CUI5_SYNPV (tr|A4CUI5) Diaminopimelate epimerase OS=Synechococcus sp. (strain
WH7805) GN=WH7805_02657 PE=3 SV=1
Length = 368
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 18 KLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
K+CDR FG+G DG+I A+P D MRIFN+DGSE EMCGNG+RC ARF+A+ +
Sbjct: 38 KVCDRRFGLGGDGLILALPPQGQGDLRMRIFNADGSEAEMCGNGIRCLARFLADSDGDLP 97
Query: 78 KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGET 137
+S+ I T AG I+PE+Q+DG+++VDMG P LK VPT L + ++ + + E+ +G T
Sbjct: 98 GRSWRIETPAGQIIPELQQDGQIRVDMGAPFLKPEAVPTLLSPD-ENGLPRGEVTREGLT 156
Query: 138 WNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++ V MGNPH V DL + + +G + E +FPA+TN
Sbjct: 157 LSLAAVGMGNPHVVV----PVDDL--ETIPFEALGAQLECDPIFPAKTNV 200
>Q7U6T2_SYNPX (tr|Q7U6T2) Diaminopimelate epimerase OS=Synechococcus sp. (strain
WH8102) GN=dapF PE=3 SV=1
Length = 364
Score = 148 bits (373), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 103/178 (57%), Gaps = 14/178 (7%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P +LCDR FGIG DGVI A+P D MRIFN+DGSE EMCGNG+RC ARF+A+
Sbjct: 33 PVWVRQLCDRRFGIGGDGVILALPPQGQGDLRMRIFNADGSEAEMCGNGIRCLARFLADS 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ + + I T AGLI PE+Q DG+++VDMG P L+ S +PT LP D + + +
Sbjct: 93 DGDAPGKRWAIETPAGLIRPELQSDGQLRVDMGAPFLEPSSIPTTLPLV--DGLARGSAD 150
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTNT 187
+ V V MGNPH V + V++LN G E H +FPA+TN
Sbjct: 151 LADRALEVAAVGMGNPHVV---------VPVEDLNAIPFDAWGAALEVHHLFPAKTNV 199
>Q067B7_9SYNE (tr|Q067B7) Diaminopimelate epimerase OS=Synechococcus sp. BL107
GN=BL107_12920 PE=3 SV=1
Length = 354
Score = 147 bits (370), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 105/178 (58%), Gaps = 14/178 (7%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P ++CDR FG+G DGVI A+P D MRIFN+DG+E EMCGNG+RC AR++A+
Sbjct: 33 PNWVRRICDRRFGVGGDGVILALPPQADGDLRMRIFNADGTEAEMCGNGIRCLARYLADT 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ + I T AG+I PE+ +G+++VDMG P L+A+ +PT L + + L
Sbjct: 93 DGEAPGCRWAIETPAGMIRPELMTNGQLRVDMGAPFLEATSIPTTL--EPLGGLPRGSLE 150
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPARTNT 187
+DG NV V MGNPH V + VD+L+L + G E H VFPA+TN
Sbjct: 151 IDGVPLNVASVGMGNPHVV---------VPVDDLSLIPFEQWGAALEVHPVFPAKTNV 199
>D2R217_PIRSD (tr|D2R217) Diaminopimelate epimerase OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=dapF PE=3 SV=1
Length = 280
Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 110/177 (62%), Gaps = 14/177 (7%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A ++ DR+FG+G DGVI+ P G D MR+FN+DGSE EMCGNG+RC A+F+ +
Sbjct: 29 EVARQMSDRHFGVGGDGVIYICPSNQGADAWMRMFNADGSESEMCGNGLRCVAKFVHD-H 87
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ----EDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
++ + TGAG++ +++ + +V+V+MG+PI++A+ +PT LP N V +
Sbjct: 88 GIKTATQLRLQTGAGILTVDLEVKAGKAHRVRVNMGQPIIEAAKIPTLLPGNPP---VNA 144
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
L G ++ VT VSMGNPHCV F + +L++ IGPK EH +FP R N
Sbjct: 145 TLEAGGRSFEVTSVSMGNPHCVVFVPEATDELVLG------IGPKIEHSPMFPRRVN 195
>C3RLM7_9MOLU (tr|C3RLM7) Diaminopimelate epimerase OS=Mollicutes bacterium D7
GN=dapF PE=3 SV=1
Length = 277
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E +K+ DR+FGIG+DG+I +P ++ D+ MR+FN DGSE MCGNG+RCFA+FI +
Sbjct: 30 EFIMKISDRHFGIGSDGMIVILP-SDQYDFKMRMFNLDGSEAMMCGNGIRCFAKFIYD-H 87
Query: 74 NLQGKQSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L K I T +GL E+ DG KV+MG+P+L D+P K ++
Sbjct: 88 KLSDKHVLKIETKSGLRTVELLFDGDECIGAKVNMGKPVLTCQDIPCTYAKEK---MIDE 144
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ + G + +T +SMGNPH VTF + +D L+L IGPKFEHH +FPA NT
Sbjct: 145 PVEIGGREYRLTTISMGNPHTVTFVSD------LDTLDLKTIGPKFEHHQLFPASVNT 196
>B0N3X2_9FIRM (tr|B0N3X2) Diaminopimelate epimerase OS=Clostridium ramosum DSM
1402 GN=dapF PE=3 SV=1
Length = 283
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E +K+ DR+FGIG+DG+I +P ++ D+ MR+FN DGSE MCGNG+RCFA+FI +
Sbjct: 36 EFIMKISDRHFGIGSDGMIVILP-SDQYDFKMRMFNLDGSEAMMCGNGIRCFAKFIYD-H 93
Query: 74 NLQGKQSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L K I T +GL E+ DG KV+MG+P+L D+P K ++
Sbjct: 94 KLSDKHVLKIETKSGLRTVELLFDGDECIGAKVNMGKPVLTCQDIPCTYAKEK---MIDE 150
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ + G + +T +SMGNPH VTF + +D L+L IGPKFEHH +FPA NT
Sbjct: 151 PVEIGGREYRLTTISMGNPHTVTFVSD------LDTLDLKTIGPKFEHHQLFPASVNT 202
>Q39RB7_GEOMG (tr|Q39RB7) Diaminopimelate epimerase OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=dapF PE=3 SV=1
Length = 282
Score = 144 bits (363), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 118/188 (62%), Gaps = 18/188 (9%)
Query: 8 EPRV-TPEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCF 65
E RV PEQ A+K+ +RNFGIG+DG+I MP ++ D MR+FNSDGSE EMCGNG+RC
Sbjct: 20 EERVDNPEQVAIKVSNRNFGIGSDGLILIMP-SDKADVRMRMFNSDGSESEMCGNGIRCV 78
Query: 66 ARFIAELENLQGKQSFTIHTGAGLIVPEI--QEDG---KVKVDMGEPILKASDVPTR-LP 119
A++ A + K+ T TGAG++ ++ DG KV+V+MG P LK +++P P
Sbjct: 79 AKY-AYDHGIVSKKEITAETGAGILTLQLVPGADGKIEKVRVNMGVPRLKRAEIPMAGEP 137
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
A D +V LN+ T+N+TCVSMGNPHCV F V++ + + GP E+H
Sbjct: 138 A--DGQIVSQPLNILHTTFNITCVSMGNPHCVIFVDD------VESFQVEKYGPLIENHE 189
Query: 180 VFPARTNT 187
+FP RTN
Sbjct: 190 LFPRRTNV 197
>B0SJ91_LEPBP (tr|B0SJ91) Diaminopimelate epimerase OS=Leptospira biflexa serovar
Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dapF PE=3
SV=1
Length = 286
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/182 (45%), Positives = 111/182 (60%), Gaps = 15/182 (8%)
Query: 10 RVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
R++PEQ KL DRNFGIG DGVIF + +N ++ M ++NSDGS EMCGNGVRC +F+
Sbjct: 32 RLSPEQIQKLSDRNFGIGGDGVIF-IRNSNSGEFQMDMYNSDGSSSEMCGNGVRCVGKFV 90
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQ--EDGKVK---VDMGEPILKASDVPTRLPANKDD 124
+ L Q TI TG G++ +++ +GKV+ VDMGEPILK S VP + D+
Sbjct: 91 YD-HGLTKNQKPTIETGKGVLTLDLKTGTNGKVEMVTVDMGEPILKPSLVP--IVWKGDE 147
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
V+ + V G+ ++ T VSMGNPHCV + D+ + EIGP E+H FP R
Sbjct: 148 PVINQVIEVQGKQYHFTAVSMGNPHCVIYVDD------ADDFPVREIGPIIENHPFFPRR 201
Query: 185 TN 186
N
Sbjct: 202 VN 203
>B1C3N1_9FIRM (tr|B1C3N1) Diaminopimelate epimerase OS=Clostridium spiroforme DSM
1552 GN=dapF PE=3 SV=1
Length = 277
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 15/174 (8%)
Query: 18 KLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
K+ DR+FGIG+DG+I +P ++ D+ MR+FN DGSE +MCGNG+RCFA+FI + L
Sbjct: 34 KISDRHFGIGSDGMIVILP-SDKYDFKMRMFNLDGSEGKMCGNGIRCFAKFIYD-HKLSD 91
Query: 78 KQSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKDDAVVKSELNV 133
K I T AGL + E+ DG KVDMG+PIL SD+P + ++ + +
Sbjct: 92 KHVLEIETKAGLRIVELLFDGDKCIGAKVDMGKPILTCSDIPCNY---NQETMIDQTIVI 148
Query: 134 DGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
D +N+T +SMGNPH VTF ++ L+L +IGPKFE H +FP NT
Sbjct: 149 DDYKYNLTSISMGNPHTVTFVDD------LETLDLKKIGPKFEFHEMFPEGVNT 196
>D7AF85_GEOSL (tr|D7AF85) Diaminopimelate epimerase OS=Geobacter sulfurreducens
KN400 GN=KN400_0520 PE=4 SV=1
Length = 277
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 114/180 (63%), Gaps = 15/180 (8%)
Query: 13 PEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
PEQ A+K+ +RNFGIG+DG+I MP ++ D MR+FNSDGSE EMCGNG+RC A++ +
Sbjct: 21 PEQTAIKVSNRNFGIGSDGLILIMP-SDKADVRMRMFNSDGSESEMCGNGIRCVAKYAYD 79
Query: 72 LENLQGKQSFTIHTGAGLIVPEI--QEDG---KVKVDMGEPILKASDVPTRLPANKDDAV 126
+ K+ T TGAG++ ++ DG +V+V+MG+P L +++P L D V
Sbjct: 80 -HGIVTKKEITAETGAGVLTLQLFTGADGRVDRVRVNMGKPRLTRAEIPM-LGDPGDGQV 137
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
V LN+ T+N+TCVSMGNPHCV F V+N + + GP E+H +FP RTN
Sbjct: 138 VGQPLNILHTTFNITCVSMGNPHCVIFVDD------VENFQVEKYGPLIENHEMFPRRTN 191
>Q74FS5_GEOSL (tr|Q74FS5) Diaminopimelate epimerase OS=Geobacter sulfurreducens
GN=dapF PE=3 SV=1
Length = 282
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 114/180 (63%), Gaps = 15/180 (8%)
Query: 13 PEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
PEQ A+K+ +RNFGIG+DG+I MP ++ D MR+FNSDGSE EMCGNG+RC A++ +
Sbjct: 26 PEQTAIKVSNRNFGIGSDGLILIMP-SDKADVRMRMFNSDGSESEMCGNGIRCVAKYAYD 84
Query: 72 LENLQGKQSFTIHTGAGLIVPEI--QEDG---KVKVDMGEPILKASDVPTRLPANKDDAV 126
+ K+ T TGAG++ ++ DG +V+V+MG+P L +++P L D V
Sbjct: 85 -HGIVTKKEITAETGAGVLTLQLFTGADGRVDRVRVNMGKPRLTRAEIPM-LGDPGDGQV 142
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
V LN+ T+N+TCVSMGNPHCV F V+N + + GP E+H +FP RTN
Sbjct: 143 VGQPLNILHTTFNITCVSMGNPHCVIFVDD------VENFQVEKYGPLIENHEMFPRRTN 196
>B9M4N3_GEOSF (tr|B9M4N3) Diaminopimelate epimerase OS=Geobacter sp. (strain
FRC-32) GN=dapF PE=3 SV=1
Length = 278
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 15/177 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+K+ +RNFGIG+DG+I MP ++ MR+FNSDGSE EMCGNG+RC A++ A +
Sbjct: 30 AIKVSNRNFGIGSDGLILIMP-SDKAHVRMRMFNSDGSESEMCGNGIRCVAKY-AYDHGI 87
Query: 76 QGKQSFTIHTGAGLIVPEI-----QEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
K+ T TGAG++ ++ + KV+V+MG+P L ++P PA D VV
Sbjct: 88 VDKKEITAETGAGILTLQLFTNCCNKVDKVRVNMGKPRLTRGEIPMSGPA--DARVVSEP 145
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
LN+ T+N+TC SMGNPHCV F VDN + + GP E+H +FP RTN
Sbjct: 146 LNILHTTFNITCASMGNPHCVIFVDD------VDNFQVEKYGPLIENHEIFPRRTNV 196
>A6CA20_9PLAN (tr|A6CA20) Diaminopimelate epimerase OS=Planctomyces maris DSM
8797 GN=dapF PE=3 SV=1
Length = 279
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 117/194 (60%), Gaps = 21/194 (10%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
V+ + T P A+ + DR+ GIG+DG+I P + D MR+FN+DGSE EMCGN
Sbjct: 16 VNCFEETLPEDIASLAIAVSDRHTGIGSDGLILICP-SEKADAQMRMFNADGSESEMCGN 74
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDG----KVKVDMGEPILKASDVPT 116
GVRC A+++ + + +Q+ I TGAG++ +++ G +V+V+MG+PIL ++++PT
Sbjct: 75 GVRCVAKYVYD-HGISNQQTLKIETGAGVLSLDLELAGSKVSQVRVNMGKPILTSAEIPT 133
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
LP D V + L V +T VTCVSMGNPHC+TF VD +N + IGP
Sbjct: 134 LLPG---DPPVNAPLEVGAQTLEVTCVSMGNPHCITF---------VDEVNDHWVHGIGP 181
Query: 174 KFEHHAVFPARTNT 187
+ E H +FP R N
Sbjct: 182 QVEVHPMFPRRVNA 195
>C4V4G3_9FIRM (tr|C4V4G3) Diaminopimelate epimerase OS=Selenomonas flueggei ATCC
43531 GN=dapF PE=3 SV=1
Length = 279
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 108/176 (61%), Gaps = 14/176 (7%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A ++CDR+FG+GADG++ A P + D MR FN DG+EPEMCGNG+RCF+R++ E +
Sbjct: 30 AREMCDRHFGVGADGLMAACP-SETADVRMREFNPDGTEPEMCGNGIRCFSRWLYE-QGY 87
Query: 76 QGKQSFTIHTGAGLIVPE-IQEDGKVK---VDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K FT+ T AG +VP I +DG V VDMG P+L+ + +P + + VV +
Sbjct: 88 VTKDEFTVETLAGTMVPHVIVQDGTVSAVAVDMGIPVLEGARIP--VAGFGTEHVVAQPI 145
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
V G+ + +TCVSMGNPHCV F D L ++G +FEHH FP + NT
Sbjct: 146 MVAGKEYAMTCVSMGNPHCVVFVDD------ADGFPLEKLGAQFEHHTAFPHKINT 195
>A2C9T8_PROM3 (tr|A2C9T8) Diaminopimelate epimerase OS=Prochlorococcus marinus
(strain MIT 9303) GN=dapF PE=3 SV=1
Length = 323
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 103/175 (58%), Gaps = 7/175 (4%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P K+CDR+FGIGADG+I A+P D M+IFN+DGS EMCGNG+RC RF+A++
Sbjct: 33 PAWVRKICDRHFGIGADGLILALPPRADGDLRMQIFNADGSLAEMCGNGIRCLTRFLADI 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ Q + I T AG+I P +QEDG++ VDMG P L +PT L + + E +
Sbjct: 93 DGDLCAQRWNIETLAGIICPILQEDGQICVDMGSPFLDPESIPTTLTIGS-AGLPQGECH 151
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ G + NV V MGNPH + +DL +++ + G E H FPA+TN
Sbjct: 152 LGGTSLNVAAVGMGNPHVIV----PVEDL--ESIPFEKWGQILEKHQTFPAKTNV 200
>Q3AXV6_SYNS9 (tr|Q3AXV6) Diaminopimelate epimerase OS=Synechococcus sp. (strain
CC9902) GN=Syncc9902_1107 PE=3 SV=1
Length = 355
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 101/175 (57%), Gaps = 8/175 (4%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P ++CDR FG+G DGVI A+P D MRIFN+DG+E EMCGNG+RC AR++A+
Sbjct: 33 PNWVRRICDRRFGVGGDGVILALPPQADGDLRMRIFNADGTEAEMCGNGIRCLARYLADT 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ + I T AG+I PE+ +G+++VDMG P L+++ +PT L + + L
Sbjct: 93 DGEAPGCRWAIETPAGMIRPELMTNGQLRVDMGAPFLESASIPTTL--EPLAGLPRGALE 150
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+DG NV V MGNPH V +DL + G E H VFPA+TN
Sbjct: 151 IDGVPLNVASVGMGNPHVVV----PVEDL--SRIPFEVWGAALEVHPVFPAKTNV 199
>D4UPU6_RUMAL (tr|D4UPU6) Diaminopimelate epimerase OS=Ruminococcus albus 8 GN=dapF
PE=3 SV=1
Length = 1351
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 104/176 (59%), Gaps = 12/176 (6%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+ L DR+FG+G DGVI + D MR+FN DGSE MCGNG+RC A+F+ + L
Sbjct: 1101 ALNLSDRHFGVGGDGVILVCR-SKVADGRMRMFNLDGSEGRMCGNGIRCVAKFMRD-NGL 1158
Query: 76 QGKQSFTIHTGAGLIVPEIQ----EDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
+ TI T +G+I ++ E VDMG IL+ +P LPA+++ VV E+
Sbjct: 1159 VDRDRMTIETLSGIIKVKLSRHYGEVNGATVDMGAAILEPERIPCTLPADENGRVVDREV 1218
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ GE VTCVSMGNPHC+ F +D++ + +IGPKFEH +FP R NT
Sbjct: 1219 EIAGEKHRVTCVSMGNPHCIVFMNN------IDDMEIEKIGPKFEHDPIFPERVNT 1268
>D3NM52_9FIRM (tr|D3NM52) Diaminopimelate epimerase OS=Ethanoligenens harbinense
YUAN-3 GN=dapF PE=3 SV=1
Length = 281
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 108/171 (63%), Gaps = 15/171 (8%)
Query: 21 DRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKQS 80
DR+FGIG+DG+I +P T D M++FN+DGSE +MCGNG+RC + EL ++ +S
Sbjct: 37 DRHFGIGSDGLILLLPSTVA-DVRMQMFNADGSEGKMCGNGIRCVGKLAYEL-DICKSES 94
Query: 81 FTIHTGAGLIVPEIQ-EDGKVK---VDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
T+ T +G+ ++Q EDGKV VDMG P ++ +P R + +V++ L V+G
Sbjct: 95 MTVETLSGIKTLKLQVEDGKVSSVCVDMGSPSMEIEKIPVRYTERR---MVEAPLTVNGT 151
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
T++VTCVSMGNPH V F +D + L +IGP+FEHH +FP NT
Sbjct: 152 TYSVTCVSMGNPHAVIFTDG------IDEMELEKIGPQFEHHEIFPESVNT 196
>D4IXE0_BUTFI (tr|D4IXE0) Diaminopimelate epimerase OS=Butyrivibrio fibrisolvens
16/4 GN=dapF PE=3 SV=1
Length = 277
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 110/182 (60%), Gaps = 23/182 (12%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E ++K+ DR+FGIG+DG+I P ++ D+ M I+N+DGSE EMCGNG+RC A+++ +
Sbjct: 28 EVSIKVSDRHFGIGSDGLITIGP-SDKADFRMHIYNADGSEAEMCGNGIRCVAKYVYD-H 85
Query: 74 NLQGKQSFTIHTGAG----LIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKD-DAVVK 128
+L T+ TGAG ++ PE + +V+VDMGEPI P +P D D V+
Sbjct: 86 HLTDNTEITVETGAGVLTLILFPENGKVQQVRVDMGEPI----HTPAEIPVVADGDKVID 141
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDN---LNLAEIGPKFEHHAVFPART 185
+ V G+TWN+TCVSMGNPH V F VD+ L GP FE+H FP RT
Sbjct: 142 EPIEVGGKTWNMTCVSMGNPHAVVF---------VDDTASFPLETYGPLFENHERFPKRT 192
Query: 186 NT 187
NT
Sbjct: 193 NT 194
>B3EBJ0_GEOLS (tr|B3EBJ0) Diaminopimelate epimerase OS=Geobacter lovleyi (strain
ATCC BAA-1151 / DSM 17278 / SZ) GN=dapF PE=3 SV=1
Length = 278
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 109/179 (60%), Gaps = 17/179 (9%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A+K+ +RNFGIG+DG+I MP T+ D MR+FNSDGSE EMCGNG+RC A++ A
Sbjct: 28 ETAIKVSNRNFGIGSDGLILIMP-TDKADVRMRMFNSDGSESEMCGNGIRCVAKY-AYDH 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQEDG-----KVKVDMGEPILKASDVPTR-LPANKDDAVV 127
+ K T TGAG++ ++ + +V+V+MG P L ++P PA + VV
Sbjct: 86 GIVTKTEITAETGAGILTLQLFPNAENKVERVRVNMGPPRLSREEIPMNGTPAAQ---VV 142
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
EL V +T+ +TCVSMGNPHC+ + VDN +A GP E+H +FP RTN
Sbjct: 143 AEELTVLDKTFKITCVSMGNPHCIIYVDD------VDNFPVATYGPLIENHQLFPRRTN 195
>Q4K3W2_PSEF5 (tr|Q4K3W2) Diaminopimelate epimerase OS=Pseudomonas fluorescens
(strain Pf-5 / ATCC BAA-477) GN=dapF PE=3 SV=1
Length = 276
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 105/186 (56%), Gaps = 18/186 (9%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGV-IFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S + P+ A + DRN GIG D + I P D+ RIFNSDGSE E CGNG RC
Sbjct: 22 SQHAHILPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDFRYRIFNSDGSEVEQCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ + + L K+ + T +G+I +I+ DG++ V+MG P L +D+P + PA D
Sbjct: 82 FARFVLD-KRLTTKRQIRVETKSGVIELDIRNDGQISVNMGAPRLVPADIPFQAPAQADS 140
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVF 181
L+VDG + VSMGNPH V L VD++N A E+GPK EHH F
Sbjct: 141 YT----LDVDGRQVQLAAVSMGNPHAV---------LRVDDINSAPVHELGPKIEHHPRF 187
Query: 182 PARTNT 187
PAR N
Sbjct: 188 PARVNV 193
>B7ASA9_9BACE (tr|B7ASA9) Putative uncharacterized protein OS=Bacteroides
pectinophilus ATCC 43243 GN=BACPEC_01964 PE=3 SV=1
Length = 293
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 116/200 (58%), Gaps = 22/200 (11%)
Query: 5 DSTEPRVTPEQAVK--LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGV 62
D T+ + AV + DR+FGIG+DG+I P ++ D+ M ++NSDGS +MCGNG+
Sbjct: 12 DCTKTSIENAGAVAKFVSDRHFGIGSDGLILIKP-SDKADFFMEMYNSDGSRAQMCGNGI 70
Query: 63 RCFARFIAELENLQGKQSFTIHTGAGLIVPEIQED------GKVKVDMGEPILKASDVPT 116
RC A+++ + L K+ I T AG+ ++ D V+V+MG PILKASD+P
Sbjct: 71 RCVAKYVYDYR-LTDKKELAIDTLAGIKYIQLNVDPATDRVVSVRVNMGSPILKASDIPV 129
Query: 117 RLPAN------KD---DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN 167
+ KD DAVV L V G + VTCVSMGNPHCV F + +DN
Sbjct: 130 NISGKDIEGITKDTIRDAVVSETLTVAGRDYQVTCVSMGNPHCVVFMDDDFD---MDNFR 186
Query: 168 LAEIGPKFEHHAVFPARTNT 187
+ EIGP FE+H VFP RTNT
Sbjct: 187 IEEIGPLFENHEVFPERTNT 206
>A3ZPZ9_9PLAN (tr|A3ZPZ9) Diaminopimelate epimerase OS=Blastopirellula marina DSM
3645 GN=dapF PE=3 SV=1
Length = 283
Score = 140 bits (352), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 115/179 (64%), Gaps = 16/179 (8%)
Query: 13 PEQAVKLC-DRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
PE L DR+FGIG DG+I P + D MR+FN+DGSE EMCGNG+RC A+++ +
Sbjct: 27 PETIAPLVSDRHFGIGGDGLILITP-SEVADARMRMFNADGSESEMCGNGLRCVAKYVFD 85
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQ-EDG---KVKVDMGEPILKASDVPTRLPANKDDAVV 127
++ K++ + TGAG++ +I+ E+G +V+V+MG+PIL+ +PT +N VV
Sbjct: 86 -HDIAKKETLKLETGAGVLTVQIETENGLARQVRVNMGQPILEGKKIPTIFDSN---PVV 141
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
++ + G++++VTCVSMGNPHCV F K +L++ +IGP+ E FP+R N
Sbjct: 142 NQKIEIAGQSFDVTCVSMGNPHCVIFVEKATDELVL------KIGPQIERSTYFPSRVN 194
>C9R855_AMMDK (tr|C9R855) Diaminopimelate epimerase OS=Ammonifex degensii (strain
DSM 10501 / KC4) GN=dapF PE=3 SV=1
Length = 279
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 108/185 (58%), Gaps = 14/185 (7%)
Query: 7 TEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFA 66
T P TPE A K+C +FG+GADG++F +P + D +MRIFN+DGSE EMCGN +RC A
Sbjct: 20 TLPPDTPELARKVCRPHFGVGADGLVFILP-SEEADITMRIFNADGSEAEMCGNAIRCVA 78
Query: 67 RFIAELENLQGKQSFTIHTGAGLIVPEIQ-EDGKV---KVDMGEPILKASDVPTRLPANK 122
+ E L Q I TGAG+ E+ +DGKV VDMGEPIL+ S +P + P K
Sbjct: 79 KLAYE-TRLIPYQRMRIATGAGIKPVELTVKDGKVVSCTVDMGEPILERSAIPMQGPPGK 137
Query: 123 DDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFP 182
V + + DG VT +S GNPHCV F V+ + E+GP+ EHH FP
Sbjct: 138 --VVNEPLIFEDGLVLRVTALSFGNPHCVLFVPA------VEEAPVEELGPRLEHHPAFP 189
Query: 183 ARTNT 187
RTN
Sbjct: 190 HRTNV 194
>A5G8E2_GEOUR (tr|A5G8E2) Diaminopimelate epimerase OS=Geobacter uraniireducens
(strain Rf4) GN=dapF PE=3 SV=1
Length = 278
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 106/177 (59%), Gaps = 15/177 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+K+ +RNFGIG+DG+I MP ++ D MR+FNSDGSE EMCGNG+RC A++ A +
Sbjct: 30 AIKVSNRNFGIGSDGLILIMP-SDKADVRMRMFNSDGSESEMCGNGIRCVAKY-AYDHGI 87
Query: 76 QGKQSFTIHTGAG-----LIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
GK+ + TGAG L E + KV+V+MG P L S++P + V+
Sbjct: 88 VGKKEISAETGAGILTLQLFTNEANKVEKVRVNMGRPRLTRSEIP--MTGEAGAKVINEP 145
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
LN+ T+++TC SMGNPHCV F V+N + + GP E+H +FP RTN
Sbjct: 146 LNILHTTFHITCASMGNPHCVIFVDD------VENFQVEKYGPIIENHEIFPRRTNV 196
>D4LE47_9FIRM (tr|D4LE47) Diaminopimelate epimerase OS=Ruminococcus sp. 18P13
GN=dapF PE=3 SV=1
Length = 279
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 15/185 (8%)
Query: 8 EPRVTPEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFA 66
E V PEQ +V+L DR FGIG DG+I MP + D+ MRIFN+DGSE MCGNG RC
Sbjct: 21 EQVVNPEQLSVRLSDRRFGIGGDGLILIMP-SQIADFKMRIFNADGSEAMMCGNGTRCIG 79
Query: 67 RFIAELENLQGKQSFTIHTGAGLIVPEIQEDG----KVKVDMGEPILKASDVPTRLPANK 122
+++ E L K T+ T +G+ E+ G V VDMG+ IL ++P + ++
Sbjct: 80 KYVYE-HGLTNKTHITLETNSGIKYLELHCTGDQVTSVTVDMGKAILTPREIP--VESDS 136
Query: 123 DDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFP 182
+ V + V +TCVS+GNPH V F + V++L+L ++GP FEHHA+FP
Sbjct: 137 QEPFVAKPVQVGDRLERLTCVSVGNPHAVVFCDR------VEDLDLEKLGPLFEHHAIFP 190
Query: 183 ARTNT 187
R NT
Sbjct: 191 DRVNT 195
>A9BAE5_PROM4 (tr|A9BAE5) Diaminopimelate epimerase OS=Prochlorococcus marinus
(strain MIT 9211) GN=dapF PE=3 SV=1
Length = 284
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 107/191 (56%), Gaps = 12/191 (6%)
Query: 1 VDNRDSTEPR--VTPEQ--AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPE 56
+D R S P V+ E+ + LC R++GIG DG+I +P G D+ M+IFNSDGSEPE
Sbjct: 19 IDGRFSLLPSSIVSAEKHLVISLCKRHYGIGCDGIILILPPVAGGDFRMKIFNSDGSEPE 78
Query: 57 MCGNGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPT 116
MCGNG+RC R+I + SF + T AG I I+E G +KVDMG PI +PT
Sbjct: 79 MCGNGIRCLIRYILDDSEDDFVDSFIVETLAGKIQINIEE-GNIKVDMGSPIFAPEKIPT 137
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFE 176
LP N + + + + + + + V+ SMGNPH + + + N+ L E G K E
Sbjct: 138 TLPIN-ERGIPQGRITILDQDFLVSACSMGNPHAII------EVPTIKNIPLYEWGQKLE 190
Query: 177 HHAVFPARTNT 187
H VFP TN
Sbjct: 191 THPVFPKYTNV 201
>C6MV42_9DELT (tr|C6MV42) Diaminopimelate epimerase OS=Geobacter sp. M18 GN=dapF
PE=3 SV=1
Length = 276
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 108/177 (61%), Gaps = 15/177 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+K+ +RNFGIG+DG+I MP + D MR+FNSDGSE EMCGNG+RC A++ + +
Sbjct: 30 AIKVSNRNFGIGSDGLILIMP-SEVADVRMRMFNSDGSESEMCGNGIRCVAKYAYDHGIV 88
Query: 76 QGKQSFTIHTGAGLIVPEI-----QEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
GK+ T TGAG++ ++ + KV+V+MG P L ++P + N D+ V+
Sbjct: 89 AGKE-ITAETGAGILTLQLFTGQDSKVEKVRVNMGPPRLTRKEIP--MLGNPDEKVINEP 145
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
LN+ T+++TC SMGNPHCV F VD + + GP E+H +FP RTN
Sbjct: 146 LNILHSTFHITCASMGNPHCVIFVDD------VDKFPVEKYGPVIENHEMFPRRTNV 196
>B5EAT0_GEOBB (tr|B5EAT0) Diaminopimelate epimerase OS=Geobacter bemidjiensis
(strain Bem / ATCC BAA-1014 / DSM 16622) GN=dapF PE=3
SV=1
Length = 278
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 15/176 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+K+ +RNFGIG+DG+I MP + D MR+FNSDGSE EMCGNG+RC A++ A +
Sbjct: 30 AIKVSNRNFGIGSDGLILIMP-SEVADVRMRMFNSDGSESEMCGNGIRCVAKY-AYDHGI 87
Query: 76 QGKQSFTIHTGAGLIVPEIQEDG-----KVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
K T TGAG++ ++ D KV+V+MG P L ++P + ++ VV
Sbjct: 88 VTKNEITAETGAGILTLQLFTDAGCKVEKVRVNMGPPRLTRKEIP--MLGEPEERVVNVP 145
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
LNV ++N+TC SMGNPHCV F VD + + GP E+H +FP RTN
Sbjct: 146 LNVLHSSFNITCASMGNPHCVIFVDD------VDTFQVEKYGPLIENHELFPRRTN 195
>D4L4P4_9FIRM (tr|D4L4P4) Carbamoyl-phosphate synthase large subunit
OS=Ruminococcus bromii L2-63 GN=RBR_01370 PE=3 SV=1
Length = 1350
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 108/178 (60%), Gaps = 16/178 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE--LE 73
AV+L DR+FGIG DG+I P + D M+++N DGSE +MCGNG+RC +F+ + +
Sbjct: 1100 AVRLSDRHFGIGGDGIILVCP-SKVADAKMKMYNLDGSEGKMCGNGIRCVGKFLYDHGMV 1158
Query: 74 NLQGKQSFTIHTGAGLIVPEIQEDG----KVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
++ K TI T +G+ + G +++VDMG+ IL ++P L +K VV
Sbjct: 1159 DINEKDEITIETLSGIKKLKAYTSGGKVNRLRVDMGKAILDPKEIPVALDGDK---VVDR 1215
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ + G+ +N+TCVSMGNPHCV F +DNL++ IGP+FE+ +FP R NT
Sbjct: 1216 TVEIAGKNYNITCVSMGNPHCVVFMDD------IDNLDIETIGPEFENDKLFPERVNT 1267
>C4G3I1_ABIDE (tr|C4G3I1) Diaminopimelate epimerase OS=Abiotrophia defectiva ATCC
49176 GN=dapF PE=3 SV=1
Length = 302
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 110/192 (57%), Gaps = 29/192 (15%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E +VKL DR+ GIG+DG+I P + D+ MRIFN+DGSE EMCGNG+RC +F+ +
Sbjct: 39 EVSVKLSDRHTGIGSDGIILICP-SKAADFRMRIFNADGSEAEMCGNGIRCVGKFVYDF- 96
Query: 74 NLQGKQSFTIHTGAGL-------IVPEIQ--------EDGKVK---VDMGEPILKASDVP 115
L K+ I TG I+PE + E+G V+ VDMG PI+ S++P
Sbjct: 97 GLTDKEEVRIETGVRSNEEETTGIIPENRIKVLQLKVENGNVRAATVDMGRPIITPSEIP 156
Query: 116 TRLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKF 175
N+ + +N++G+ W TCVSMGNPH VTF +L+L IGPKF
Sbjct: 157 VVSAKNE---FINEPINIEGKDWYFTCVSMGNPHAVTFVDD------TKSLDLPVIGPKF 207
Query: 176 EHHAVFPARTNT 187
E + +FP RTNT
Sbjct: 208 EFNEIFPNRTNT 219
>Q3AJV7_SYNSC (tr|Q3AJV7) Diaminopimelate epimerase OS=Synechococcus sp. (strain
CC9605) GN=Syncc9605_1371 PE=3 SV=1
Length = 368
Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P ++CDR FG+G DG+I A+P + MRI N DGSE EMCGNG+RC AR++A+
Sbjct: 33 PAWVRRICDRRFGVGGDGLILALPAQADGELRMRILNVDGSEAEMCGNGIRCLARYLADT 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ + + I T AG+I PE+ DG+++VDMG P L + +PT L +D + + L
Sbjct: 93 DGDAPGRRWDIETLAGMIRPELMADGQLRVDMGPPFLSSEGIPTTL--MPEDGLPQGVLL 150
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFEHHAVFPARTNT 187
++GE V V MGNPH V + VD+L G E H FPA+TN
Sbjct: 151 LEGEQLKVAAVGMGNPHVV---------VPVDDLASIPFDAWGAALEVHPAFPAKTNV 199
>A7VC93_9CLOT (tr|A7VC93) Diaminopimelate epimerase OS=Clostridium sp. L2-50
GN=dapF PE=3 SV=1
Length = 278
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 110/179 (61%), Gaps = 16/179 (8%)
Query: 13 PEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
PE+ A+ + DR+FG+G+DGVI P ++ D++M ++N+DGS EMCGNG+RC +++ +
Sbjct: 26 PEKLAIAMSDRHFGVGSDGVILIKP-SDKADFTMDMYNADGSRSEMCGNGIRCVGKYVYD 84
Query: 72 LENLQGKQSFTIHTGAGL-IVPEIQEDGK---VKVDMGEPILKASDVPTRLPANKDDAVV 127
L K S ++ T AG+ + + +DGK V VDMG PILKA VP R + + V+
Sbjct: 85 Y-GLTDKTSISVETLAGIKYLDFVIKDGKVDMVTVDMGAPILKADQVPVR---SDKEQVI 140
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
++ V G +++TCVSMGNPH V F ++ L E GP FEHH VFP R N
Sbjct: 141 DEKITVAGVDYHMTCVSMGNPHAVMFVDD------TEHFPLEEAGPLFEHHEVFPNRVN 193
>A1AUI6_PELPD (tr|A1AUI6) Diaminopimelate epimerase OS=Pelobacter propionicus
(strain DSM 2379) GN=dapF PE=3 SV=1
Length = 278
Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 13 PEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
P Q A+++ +RNFGIG+DG+I MP T D MR+FNSDGSE EMCGNG+RC A++ +
Sbjct: 26 PRQVAIQVSNRNFGIGSDGLILIMPSTT-ADVRMRMFNSDGSESEMCGNGIRCVAKYAFD 84
Query: 72 LENLQGKQSFTIHTGAGLIVPEI--QEDG---KVKVDMGEPILKASDVPTRLPANKDDAV 126
+ K+ T TGAG++ + DG KV+V+MG P L S++P R + V
Sbjct: 85 -HGIVSKKEITAETGAGILALRLIAGSDGKIAKVRVNMGPPRLARSEIPMR--GDAAPQV 141
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
V +L + T+N+TC SMGNPHCV F V ++ GP E+H +FP RTN
Sbjct: 142 VGEQLTILDRTFNITCASMGNPHCVIFVDD------VAGFPVSTYGPLIENHELFPNRTN 195
>B0KA18_THEP3 (tr|B0KA18) Diaminopimelate epimerase OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E)
GN=Teth39_1327 PE=3 SV=1
Length = 269
Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A+KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E
Sbjct: 21 ELAIKLCDRHFGIGADGLLVVEP-SGIADIRMRIFNADGSEAEMCGNGSRCFAKYVYE-R 78
Query: 74 NLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K+ + T AG+I+PE+ E+GK VKV MG PI +A+ +P + K +
Sbjct: 79 GIVKKEKMAVETLAGVIMPEVFVENGKVESVKVYMGSPIFEANKIPVKTDKQK---FINE 135
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ +DG+ + +T + +G PH + F ++++ + E+GPK E ++FP TN
Sbjct: 136 PVKIDGKVYKLTSIRVGVPHTIVFVKSLDENM------IKELGPKIEKSSIFPQGTNV 187
>B0K299_THEPX (tr|B0K299) Diaminopimelate epimerase OS=Thermoanaerobacter sp.
(strain X514) GN=Teth514_1764 PE=3 SV=1
Length = 269
Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A+KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E
Sbjct: 21 ELAIKLCDRHFGIGADGLLVVEP-SGIADIRMRIFNADGSEAEMCGNGSRCFAKYVYE-R 78
Query: 74 NLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K+ + T AG+I+PE+ E+GK VKV MG PI +A+ +P + K +
Sbjct: 79 GIVKKEKMAVETLAGVIMPEVFVENGKVESVKVYMGSPIFEANKIPVKTDKQK---FINE 135
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ +DG+ + +T + +G PH + F ++++ + E+GPK E ++FP TN
Sbjct: 136 PVKIDGKVYKLTSIRVGVPHTIVFVKSLDENM------IKELGPKIEKSSIFPQGTNV 187
>C7ITQ2_THEET (tr|C7ITQ2) Diaminopimelate epimerase OS=Thermoanaerobacter
ethanolicus CCSD1 GN=dapF PE=3 SV=1
Length = 274
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A+KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E
Sbjct: 26 ELAIKLCDRHFGIGADGLLVVEP-SGIADIRMRIFNADGSEAEMCGNGSRCFAKYVYE-R 83
Query: 74 NLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K+ + T AG+I+PE+ E+GK VKV MG PI +A+ +P + K +
Sbjct: 84 GIVKKEKMAVETLAGVIMPEVFVENGKVESVKVYMGSPIFEANKIPVKTDKQK---FINE 140
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ +DG+ + +T + +G PH + F ++++ + E+GPK E ++FP TN
Sbjct: 141 PVKIDGKVYKLTSIRVGVPHTIVFVKSLDENM------IKELGPKIEKSSIFPQGTNV 192
>C7HR72_9THEO (tr|C7HR72) Diaminopimelate epimerase OS=Thermoanaerobacter sp.
X561 GN=dapF PE=3 SV=1
Length = 274
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A+KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E
Sbjct: 26 ELAIKLCDRHFGIGADGLLVVEP-SGIADIRMRIFNADGSEAEMCGNGSRCFAKYVYE-R 83
Query: 74 NLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K+ + T AG+I+PE+ E+GK VKV MG PI +A+ +P + K +
Sbjct: 84 GIVKKEKMAVETLAGVIMPEVFVENGKVESVKVYMGSPIFEANKIPVKTDKQK---FINE 140
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ +DG+ + +T + +G PH + F ++++ + E+GPK E ++FP TN
Sbjct: 141 PVKIDGKVYKLTSIRVGVPHTIVFVKSLDENM------IKELGPKIEKSSIFPQGTNV 192
>C5UAG1_THEBR (tr|C5UAG1) Diaminopimelate epimerase OS=Thermoanaerobacter brockii
subsp. finnii Ako-1 GN=dapF PE=3 SV=1
Length = 274
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A+KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E
Sbjct: 26 ELAIKLCDRHFGIGADGLLVVEP-SGIADIRMRIFNADGSEAEMCGNGSRCFAKYVYE-R 83
Query: 74 NLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K+ + T AG+I+PE+ E+GK VKV MG PI +A+ +P + K +
Sbjct: 84 GIVKKEKMAVETLAGVIMPEVFVENGKVESVKVYMGSPIFEANKIPVKTDKQK---FINE 140
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ +DG+ + +T + +G PH + F ++++ + E+GPK E ++FP TN
Sbjct: 141 PVKIDGKVYKLTSIRVGVPHTIVFVKSLDENM------IKELGPKIEKSSIFPQGTNV 192
>D4MWP8_9FIRM (tr|D4MWP8) Diaminopimelate epimerase OS=butyrate-producing
bacterium SSC/2 GN=dapF PE=3 SV=1
Length = 283
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 15/180 (8%)
Query: 13 PEQAVK-LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
P + K + DR+FGIG+DG+I P ++ D+ M ++NSDGSE MCGNGVRC A+++ +
Sbjct: 26 PNKVAKFISDRHFGIGSDGMICICP-SDKADFRMAMYNSDGSEGAMCGNGVRCIAKYVYD 84
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVV 127
L K + TI T G+ ++ EDGK VKVDM PI KAS +P + D V+
Sbjct: 85 Y-GLTDKTTITIETKGGIKELDLTVEDGKVTWVKVDMEAPITKASQIPAIY--DDLDEVI 141
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG+ +N+TC+SMGNPH V F V ++++ +IGPKFE+H +FP R NT
Sbjct: 142 DQPVIVDGKEYNITCISMGNPHGVVFVDS------VADIDIEKIGPKFENHPMFPDRVNT 195
>B0P3K7_9CLOT (tr|B0P3K7) Diaminopimelate epimerase OS=Clostridium sp. SS2/1
GN=dapF PE=3 SV=1
Length = 283
Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 15/180 (8%)
Query: 13 PEQAVK-LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
P + K + DR+FGIG+DG+I P ++ D+ M ++NSDGSE MCGNGVRC A+++ +
Sbjct: 26 PNKVAKFISDRHFGIGSDGMICICP-SDKADFRMAMYNSDGSEGAMCGNGVRCIAKYVYD 84
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVV 127
L K + TI T G+ ++ EDGK VKVDM PI KAS +P + D V+
Sbjct: 85 Y-GLTDKTTITIETKGGIKELDLTVEDGKVTWVKVDMEAPITKASQIPAIY--DDLDEVI 141
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG+ +N+TC+SMGNPH V F V ++++ +IGPKFE+H +FP R NT
Sbjct: 142 DQPVIVDGKEYNITCISMGNPHGVVFVDS------VADIDIEKIGPKFENHPMFPDRVNT 195
>C6DYE5_GEOSM (tr|C6DYE5) Diaminopimelate epimerase OS=Geobacter sp. (strain M21)
GN=dapF PE=3 SV=1
Length = 278
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 105/177 (59%), Gaps = 15/177 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+K+ +RNFGIG+DG+I MP + D MR+FNSDGSE EMCGNG+RC A++ A +
Sbjct: 30 AIKVSNRNFGIGSDGLILIMP-SEVADVRMRMFNSDGSESEMCGNGIRCVAKY-AYDHGI 87
Query: 76 QGKQSFTIHTGAGLIVPEIQEDG-----KVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
K T TGAG++ ++ KV+V+MG P L ++P + ++ VV
Sbjct: 88 VSKNEITAETGAGILTLQLFTGAGGKVEKVRVNMGPPRLTRKEIP--MLGEPEERVVNVP 145
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
LNV ++N+TC SMGNPHCV F VD+ + + GP E+H +FP RTN
Sbjct: 146 LNVLHSSFNITCASMGNPHCVIFVDD------VDSFQVEKYGPLIENHELFPRRTNV 196
>B9Z0T9_9NEIS (tr|B9Z0T9) Diaminopimelate epimerase OS=Lutiella nitroferrum 2002
GN=dapF PE=3 SV=1
Length = 276
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+TPE+ +L R FGIG D ++ P G++ D+ RIFNSDGSE E CGNG RCFARF+
Sbjct: 27 LTPEKIKELGHRQFGIGFDQLLLVEPSGSSENDFRYRIFNSDGSEVEQCGNGARCFARFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
AE + L K + + T G+IVP++ DG V VDMG P K P +P + +
Sbjct: 87 AE-QGLSAKVAIRVETAKGVIVPQLLADGTVTVDMGVPRFK----PVEIPFVAAEEALTY 141
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
L+ G +++ VSMGNPH V VD +AE+GP E H FP R N
Sbjct: 142 PLDAAGRQCDISVVSMGNPHAVQVVAD------VDTFPVAELGPAIELHPRFPERVNA 193
>C7IDA2_9CLOT (tr|C7IDA2) Diaminopimelate epimerase OS=Clostridium papyrosolvens
DSM 2782 GN=dapF PE=3 SV=1
Length = 277
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 109/176 (61%), Gaps = 21/176 (11%)
Query: 18 KLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
K+ DR+FGIG+DG++ M ++ D+ MR+FNSDGSE EMCGN +RC +++ + L
Sbjct: 32 KVSDRHFGIGSDGLVLIMK-SDIADFRMRMFNSDGSESEMCGNAIRCVGKYVFD-NGLTD 89
Query: 78 KQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKSELNV 133
K++ TI T AG+ V +++ ED K V+VDMGEPIL++ +P ++ D + + V
Sbjct: 90 KKNLTIETLAGIKVLDLKIEDNKVVQVRVDMGEPILESKQIPVD---SEKDRFISESVEV 146
Query: 134 DGETWNVTCVSMGNPHCVTFGTKENKDLLVDN---LNLAEIGPKFEHHAVFPARTN 186
DG + VT VSMGNPH +T+ VD+ L E+GPK E H +FP + N
Sbjct: 147 DGYNYKVTAVSMGNPHAITY---------VDDTASFPLYEVGPKMETHKLFPKKIN 193
>C6LHV8_9FIRM (tr|C6LHV8) Diaminopimelate epimerase OS=Bryantella formatexigens
DSM 14469 GN=dapF PE=3 SV=1
Length = 277
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 116/180 (64%), Gaps = 16/180 (8%)
Query: 13 PEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
PE+ A+ + DR+FGIG+DG+I P ++ D M ++N+DGS+ MCGNG+RC A+++ +
Sbjct: 26 PEKTAILVSDRHFGIGSDGLILIKP-SSVADGKMEMYNADGSQGAMCGNGIRCVAKYMYD 84
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQ-EDGKV---KVDMGEPILKASDVPTRLPANKDDAVV 127
+ K S ++ T +G+ ++ E+GKV +V+MG P+L+A+ +P ++ + V+
Sbjct: 85 Y-GITDKTSISVETKSGIKYLDLTVENGKVSAVRVNMGSPVLQAAAIP---AVSEKETVI 140
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ V+G W +TCVSMGNPH VT+ V +L++ +IGP+FEHH +FP R NT
Sbjct: 141 DEPVTVNGREWRLTCVSMGNPHAVTYVED------VKHLDIEKIGPEFEHHPMFPDRVNT 194
>D4JIW6_9FIRM (tr|D4JIW6) Diaminopimelate epimerase OS=Eubacterium rectale M104/1
GN=dapF PE=3 SV=1
Length = 285
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 106/180 (58%), Gaps = 16/180 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
++ + DR+FGIG+DG+I P + D+ MRI+N+DGSE EMCGNG+RC A+++ + L
Sbjct: 30 SIYVSDRHFGIGSDGLITIGP-SGKADFRMRIYNADGSEAEMCGNGIRCVAKYVYD-HKL 87
Query: 76 QGKQSFTIHTGAGL----IVPEIQEDGKVKVDMGEPILKASDVPTRLP---ANKDDA-VV 127
K ++ TGAG+ + E + +V+VDMGEPIL D+P A DD V+
Sbjct: 88 TDKTEISVETGAGIKYLTLYVEENKVSQVRVDMGEPILTPGDIPVVKADGSAYSDDYRVI 147
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++ W++TCVSMGNPH V F V L + GP FE+H +FP RTNT
Sbjct: 148 DEPISAGNREWHMTCVSMGNPHAVVFVDD------VAGFELEKYGPLFENHKMFPKRTNT 201
>D6E3Z8_9FIRM (tr|D6E3Z8) Diaminopimelate epimerase OS=Eubacterium rectale DSM
17629 GN=dapF PE=3 SV=1
Length = 285
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 107/180 (59%), Gaps = 16/180 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
++ + DR+FGIG+DG+I P ++ D+ MRI+N+DGSE EMCGNG+RC A+++ + L
Sbjct: 30 SIYVSDRHFGIGSDGLITIGP-SDKADFRMRIYNADGSEAEMCGNGIRCVAKYVYD-HKL 87
Query: 76 QGKQSFTIHTGAGL----IVPEIQEDGKVKVDMGEPILKASDVPTRLP---ANKDDA-VV 127
K ++ TGAG+ + E + +V+VDMGEPIL D+P A DD V+
Sbjct: 88 TDKTEISVETGAGIKYLTLYVEENKVSQVRVDMGEPILTPGDIPVVKADGSAYGDDYRVI 147
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++ W++TCVSMGNPH V F V L + GP FE+H +FP RTNT
Sbjct: 148 DEPISAGNREWHMTCVSMGNPHAVVFVDD------VAGFELEKYGPLFENHKMFPKRTNT 201
>A7AZS1_RUMGN (tr|A7AZS1) Putative uncharacterized protein OS=Ruminococcus gnavus
ATCC 29149 GN=RUMGNA_00795 PE=3 SV=1
Length = 292
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 108/179 (60%), Gaps = 17/179 (9%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E AVK+ +RNFG+G+DG+I P + D+ M ++N+DGS EMCGNG+RC A+++ +
Sbjct: 43 EMAVKVSNRNFGVGSDGLILINP-SEKADFEMEMYNADGSRGEMCGNGIRCVAKYVYDY- 100
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDA-VVK 128
L K ++ T G+ ++ EDGK V+VDMG PIL P ++P D+A V
Sbjct: 101 GLTDKTHISVETLGGIKYLDLTVEDGKVVLVRVDMGSPIL----TPAQIPVIADEAEAVA 156
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VD + +TCVSMGNPH V F +++L + +IGPKFEHH FP R NT
Sbjct: 157 VPILVDETEYQMTCVSMGNPHAVIFMDD------IEHLEIEKIGPKFEHHERFPNRVNT 209
>C0EZ50_9FIRM (tr|C0EZ50) Diaminopimelate epimerase OS=Eubacterium hallii DSM
3353 GN=dapF PE=3 SV=1
Length = 290
Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 109/173 (63%), Gaps = 15/173 (8%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
+ DR+FGIG+DG+I P D+ M I+N+DGS+ EMCGNG+RC A+++ + L K
Sbjct: 41 VSDRHFGIGSDGLILISPSAKA-DFRMNIYNADGSQAEMCGNGIRCVAKYVYDY-GLTDK 98
Query: 79 QSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKSELNVD 134
++ T AG+ ++Q E+GK V+V+MG PIL+ +P A +++ VV + V
Sbjct: 99 TEISVETLAGIKYLKLQVENGKVATVEVNMGAPILEPKKIPV---AVENNPVVDVPVEVK 155
Query: 135 GETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
G+T+++TCVSMGNPH + F V L++ IGP FE+H VFP RTNT
Sbjct: 156 GKTYHMTCVSMGNPHAIIFMDN------VKELDIEAIGPYFENHPVFPKRTNT 202
>Q39ZZ8_PELCD (tr|Q39ZZ8) Diaminopimelate epimerase OS=Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1) GN=dapF PE=3 SV=1
Length = 279
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 110/178 (61%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A K+ +RNFGIG+DG+I +P + D MR+FNSDGSE EMCGNG+RC A++ A
Sbjct: 28 EMARKVSNRNFGIGSDGLILILP-SEVADVRMRMFNSDGSESEMCGNGIRCVAKY-AYDH 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQEDG-----KVKVDMGEPILKASDVPTRLPANKDDAVVK 128
L K+ T TGAG++ ++ + +V+V+MG+P L ++P + + ++ V+
Sbjct: 86 GLVEKKEITAETGAGILTLQLFTNDRDKVERVRVNMGKPRLTRGEIP--MTGSPEEQVIN 143
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+EL V T+++TCVSMGNPHC+ F VD +A+ GP E+ +FP RTN
Sbjct: 144 AELKVLDRTFHITCVSMGNPHCIIFVDN------VDEFPVAKYGPIIENDPMFPNRTN 195
>C3K436_PSEFS (tr|C3K436) Diaminopimelate epimerase OS=Pseudomonas fluorescens
(strain SBW25) GN=dapF PE=3 SV=1
Length = 276
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 105/186 (56%), Gaps = 18/186 (9%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGV-IFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S + P+ A + DR+ GIG D + I P D+ RIFNSDGSE E CGNG RC
Sbjct: 22 SQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDFRYRIFNSDGSEVEQCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ + + L K+ + T +G+I +I+ DG++ V+MG P L VP +P +
Sbjct: 82 FARFVLD-KRLTAKRQIRVETKSGVIELDIRSDGQISVNMGAPRL----VPADIPFEATE 136
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVF 181
V L+VDG+T ++ VSMGNPH V L V+++N A E GPK EHH F
Sbjct: 137 QAVSYALDVDGKTVDIAAVSMGNPHAV---------LRVNDINNAPVHEWGPKIEHHPRF 187
Query: 182 PARTNT 187
PAR N
Sbjct: 188 PARVNV 193
>D7CLP5_9FIRM (tr|D7CLP5) Diaminopimelate epimerase OS=Syntrophothermus
lipocalidus DSM 12680 GN=Slip_0850 PE=4 SV=1
Length = 282
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
Query: 4 RDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVR 63
+ P A+KLCDR+FGIG DG++ D MRIFN DGSEPEMCGN +R
Sbjct: 20 KSELSPEDYSRTAIKLCDRHFGIGGDGLVIVGKDRE-LDVFMRIFNPDGSEPEMCGNAIR 78
Query: 64 CFARFIAELENLQGKQSFTIHTGAGLIVPEI----QEDGKVKVDMGEPILKASDVPTRLP 119
C ++F+ E L +++T AG PE+ E KV+VDMGEPIL+ S +P
Sbjct: 79 CVSKFVWE-RGLVSTTRISVNTLAGPRYPEVILKNGEVEKVRVDMGEPILERSLIPMLGS 137
Query: 120 ANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHA 179
K VV EL+ + +T VSMGNPHCV F + ++ ++E GP E+H
Sbjct: 138 PGK---VVGEELDTTAGRFRITAVSMGNPHCVVFVDE------FSSVPVSEWGPVLENHP 188
Query: 180 VFPARTNT 187
VFP+RTN
Sbjct: 189 VFPSRTNV 196
>D5SNB0_PLAL2 (tr|D5SNB0) Diaminopimelate epimerase OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=dapF
PE=3 SV=1
Length = 280
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 107/184 (58%), Gaps = 16/184 (8%)
Query: 9 PRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
P P+ A + +R GIG DG+I P G D M++FN+DGSE EMCGNGVRC A++
Sbjct: 24 PLAAPDLARIVSNRYKGIGGDGLILIGPSERG-DARMQMFNADGSESEMCGNGVRCVAKY 82
Query: 69 IAELENLQGKQSFTIHTGAGLIVPEI--QEDGK---VKVDMGEPILKASDVPTRLPANKD 123
+ + + K I TG G++ ++ GK V+V+MG PILK++D+PT LP
Sbjct: 83 VYD-HGIAKKPELRIETGRGVLTLQMFAGSSGKAERVRVNMGTPILKSADIPTALPG--- 138
Query: 124 DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPA 183
D V L V +T +VTCVSMGNPHCVTF D L D L +GP+ E HA FP
Sbjct: 139 DPPVNQPLVVGDKTISVTCVSMGNPHCVTF-----VDELTDAWVLG-LGPQVEVHAAFPR 192
Query: 184 RTNT 187
R N
Sbjct: 193 RVNA 196
>D4XXY4_9CHLR (tr|D4XXY4) Diaminopimelate epimerase OS=Dehalogenimonas
lykanthroporepellens BL-DC-9 GN=dapF PE=3 SV=1
Length = 291
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 102/181 (56%), Gaps = 14/181 (7%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE AV CDR+FGIG DG++ MP + DY MRIFN+DGSE E CGNG+RC ++I E
Sbjct: 26 PETAVWACDRHFGIGGDGLLVLMP-SQKADYRMRIFNNDGSEAEACGNGLRCLVKYILEF 84
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ---EDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ Q KQ TI T AG+ I D +K MGEPIL+ +P + K +
Sbjct: 85 KE-QDKQELTIETAAGVRKATISGNTSDPDIKTGMGEPILETIRIPVEIEDGKGHELCGM 143
Query: 130 E----LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPART 185
L+V+G+ + VSMGNPH + F + ++ L ++GP E H++FP+ T
Sbjct: 144 TSGYPLSVNGQEHTLAFVSMGNPHAIEFIESD-----LEAFPLGDVGPSIEKHSMFPSHT 198
Query: 186 N 186
N
Sbjct: 199 N 199
>D7I6G6_PSESS (tr|D7I6G6) Diaminopimelate epimerase OS=Pseudomonas savastanoi pv.
savastanoi NCPPB 3335 GN=PSA3335_4830 PE=4 SV=1
Length = 276
Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 102/186 (54%), Gaps = 18/186 (9%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S + P+ A + DR+ GIG D ++ P D+ RIFNSDGSE E CGNG RC
Sbjct: 22 SQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPNNPDVDFRYRIFNSDGSEVEQCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ + + L K+ + T +G+I +I+ DG++ VDMG P VP +P +
Sbjct: 82 FARFVLD-KRLTAKKQIRVETKSGIIELDIRSDGQISVDMGPPRF----VPEEIPFEAAE 136
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVF 181
+ + VDG+ + VSMGNPH V L VD++N A E+GPK EHH F
Sbjct: 137 QATRYNVEVDGQNIELAAVSMGNPHAV---------LRVDDINNAPVHELGPKIEHHPRF 187
Query: 182 PARTNT 187
PAR N
Sbjct: 188 PARVNV 193
>A6UN47_METVS (tr|A6UN47) Diaminopimelate epimerase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0004 PE=3
SV=1
Length = 292
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 15/173 (8%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
+ DR+FGIG+DG++ + + D+ MR+FNSDGSE EMCGN +RC +F+ + L K
Sbjct: 48 VSDRHFGIGSDGLVLILD-SKIADFKMRMFNSDGSEAEMCGNAIRCVGKFVYD-NKLTDK 105
Query: 79 QSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKDDAVVKSELNVD 134
+ TI T AG+ V E+ +G+ VKVDMGEP L+A +P + V+ ++ +
Sbjct: 106 KIITIETLAGVKVLEMTVEGEEVVLVKVDMGEPTLEALKIPV---ISDKYPVINETIDSN 162
Query: 135 GETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
G + TCVSMGNPH VT+ VDN L +IGP FE H FP +TN
Sbjct: 163 GYNFKFTCVSMGNPHAVTYIED------VDNFELQKIGPLFEAHEKFPKKTNV 209
>B0ME98_9FIRM (tr|B0ME98) Diaminopimelate epimerase OS=Anaerostipes caccae DSM
14662 GN=dapF PE=3 SV=1
Length = 285
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 110/178 (61%), Gaps = 14/178 (7%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A + DR+FGIG+DG+I P ++ D+ M ++NSDG+E MCGNGVRC A+++ +
Sbjct: 35 ETAKFVSDRHFGIGSDGMICIHP-SDKADFRMAMYNSDGTEGAMCGNGVRCIAKYVYDY- 92
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L K + TI T G+ ++ EDGK V VDM P+L+A +P + +++ V+
Sbjct: 93 GLTDKTTITIETKGGIKELDLTVEDGKVTWVNVDMEAPVLEADKIP--VIYDEEKKVIDK 150
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG + +TCVSMGNPH V F VD+L++ ++GP FEHH +FP R NT
Sbjct: 151 PVIVDGREYRITCVSMGNPHGVVFVDS------VDDLDIEKLGPMFEHHPMFPDRVNT 202
>D3E5S4_GEOS4 (tr|D3E5S4) Diaminopimelate epimerase OS=Geobacillus sp. (strain
Y412MC10) GN=dapF PE=3 SV=1
Length = 279
Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 108/187 (57%), Gaps = 22/187 (11%)
Query: 9 PRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
P E AVKLC+R FGIGADG+++ +P D+ MRI NSDGSE E CGN +RC A++
Sbjct: 24 PSDASELAVKLCNRFFGIGADGLVYILPSAK-ADFMMRIMNSDGSEAEQCGNAIRCVAKY 82
Query: 69 IAELENLQGKQSFTIHT-GAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKD 123
+ + ++ ++ TI T GAG+ + +DG+ V+VDMGEP+L VPT + N
Sbjct: 83 VYDHGHID-REEITIETIGAGVQQVRLTVQDGQVSSVRVDMGEPVLNGLSVPTLVDLNP- 140
Query: 124 DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVD---NLNLAEIGPKFEHHAV 180
VV + VDG + T VSMGNPHCV + VD N +L GPK E H +
Sbjct: 141 --VVNHPVEVDGREFRFTAVSMGNPHCVIY---------VDDAVNFDLGVWGPKLEVHPL 189
Query: 181 FPARTNT 187
FP + N
Sbjct: 190 FPRKINV 196
>C6J2A7_9BACL (tr|C6J2A7) Diaminopimelate epimerase OS=Paenibacillus sp. oral
taxon 786 str. D14 GN=dapF PE=3 SV=1
Length = 278
Score = 133 bits (335), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 106/186 (56%), Gaps = 22/186 (11%)
Query: 9 PRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
P E A++ CDR FG+G DG++F +P ++ D+ MRI NSDG+E E CGN +RC A++
Sbjct: 23 PDNVSELAIRWCDRYFGVGGDGLVFILP-SDKADFKMRIINSDGTEAEQCGNAIRCVAKY 81
Query: 69 IAELENLQGKQSFTIHT-GAGLIVPEIQ-EDGKVK---VDMGEPILKASDVPTRLPANKD 123
+ + L K S TI T GAG+ +Q EDG VK VDMGEPIL +PT L N
Sbjct: 82 VYD-NRLVDKDSVTIETLGAGVQQVTLQVEDGVVKTVRVDMGEPILDGLTIPTTLNQN-- 138
Query: 124 DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVD---NLNLAEIGPKFEHHAV 180
VV + +G+ + T VSMGNPHCV + VD N ++ GPK E H
Sbjct: 139 -PVVSQPIETNGQEFKFTAVSMGNPHCVIY---------VDDAPNFDVTTWGPKLEVHPY 188
Query: 181 FPARTN 186
FP + N
Sbjct: 189 FPRKIN 194
>A5KLX2_9FIRM (tr|A5KLX2) Diaminopimelate epimerase OS=Ruminococcus torques ATCC
27756 GN=dapF PE=3 SV=1
Length = 277
Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 14/178 (7%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A K+ D ++G+G+DG+I P ++ D+ M ++N+DGS EMCGNG+RC A+++ +
Sbjct: 28 ELAKKISDWHYGVGSDGLIMINP-SDKADFEMEMYNADGSRGEMCGNGIRCVAKYVYDY- 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L K S ++ T AG+ ++ EDGK VKVDMG+P+L+ +VP ++ + V+
Sbjct: 86 GLTDKTSISVETLAGIKYLDLTVEDGKVVLVKVDMGKPMLRPEEVPV---VSEKEEVIDE 142
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG+ + +TCVSMGNPH V F ++ K+ L +G KFE+H FP R NT
Sbjct: 143 PITVDGQEYRMTCVSMGNPHAVVFIDQDVKE-----FPLETVGVKFENHERFPKRVNT 195
>D3LTT0_9FIRM (tr|D3LTT0) Diaminopimelate epimerase OS=Megasphaera genomosp.
type_1 str. 28L GN=dapF PE=3 SV=1
Length = 279
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 111/178 (62%), Gaps = 16/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
+ AVK+C R+ GIGADG+I +P + D MRI N+DGSE EMCGNG+RCFA+++ +
Sbjct: 28 QLAVKMCKRHTGIGADGLIVIVP-SEKADVRMRIINADGSEAEMCGNGIRCFAKYVYD-H 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ--EDGKVK---VDMGEPILKASDVPTRLPANKDDAVVK 128
++ K FT+ T AG++ P++ EDGKV+ ++MG+P + +P P+ V+
Sbjct: 86 HIMAKDEFTVETLAGIMKPKVLTGEDGKVQLVTINMGKPFPERRKIPMNGPSG---TVIN 142
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
L VDG+ + +T + MG PH + + KD V+ ++L +GPKFE H FP +TN
Sbjct: 143 EPLTVDGKEYRITSLLMGVPHTMIY----VKD--VEQVDLPVLGPKFETHPAFPKKTN 194
>B0PBH6_9FIRM (tr|B0PBH6) Putative uncharacterized protein OS=Anaerotruncus
colihominis DSM 17241 GN=ANACOL_02128 PE=3 SV=1
Length = 276
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 110/181 (60%), Gaps = 17/181 (9%)
Query: 13 PEQAVKLC-DRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
PE+ ++ DR+FGIG+DG+I P ++ D+ MR+FN+DGSE MCGNG+RC +++ +
Sbjct: 21 PEEIARIVSDRHFGIGSDGLILICP-SDRADFQMRMFNADGSEGNMCGNGIRCVGKYVYD 79
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQ--EDG---KVKVDMGEPILKASDVPTRLPANKDDAV 126
+ L + S I T +G+ ++ DG V+VDMG+ LKA D+P + + DD +
Sbjct: 80 -QGLTERTSIQIETKSGVRSLDLTLGPDGTVSSVRVDMGKASLKAKDIP--VETDYDDFI 136
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ L V GE + VTCVSMGNPH V F VDNL LAEIGP FE H FP N
Sbjct: 137 SQPML-VRGEVYLVTCVSMGNPHAVVFCDD------VDNLPLAEIGPLFERHEKFPEGVN 189
Query: 187 T 187
T
Sbjct: 190 T 190
>A7VVM6_9CLOT (tr|A7VVM6) Putative uncharacterized protein OS=Clostridium leptum
DSM 753 GN=CLOLEP_02638 PE=3 SV=1
Length = 1355
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 109/180 (60%), Gaps = 15/180 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
+V+L DR++GIG DGVI P ++ D MR+FN DGSE +MCGNG+RC +F+ + +
Sbjct: 1100 SVRLSDRHYGIGGDGVILVCP-SDVADGKMRMFNLDGSEGKMCGNGIRCVGKFLYDHGLV 1158
Query: 76 Q-GKQSFTIHTGAGL-IVPEIQEDGKV---KVDMGEPILKASDVP---TRLPANKDDAVV 127
K+ T+ T +G+ + I D KV KVDMG+ L + +P ++LP K D +V
Sbjct: 1159 DPAKEKITVETLSGIKTLWPIYNDRKVCAMKVDMGKAELTPALIPVDASKLPDPKADRIV 1218
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG ++VTCVSMGNPHCV F V+ +++ +IGP FE +FP R NT
Sbjct: 1219 NAPYTVDGVEYHVTCVSMGNPHCVVFKND------VETMDIEKIGPAFETSELFPERVNT 1272
>D4M005_9FIRM (tr|D4M005) Diaminopimelate epimerase OS=Ruminococcus torques L2-14
GN=dapF PE=3 SV=1
Length = 276
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 107/176 (60%), Gaps = 15/176 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+++ DR+FGIG+DG+I P + D M ++N+DGS EMCGNGVRC +++ + L
Sbjct: 30 AIQVSDRHFGIGSDGLILICP-SEVADCEMAMYNADGSRGEMCGNGVRCVGKYMYDY-GL 87
Query: 76 QGKQSFTIHTGAGLIVPEI-QEDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K T+ T AG+ ++ E+G KV+VDMG PIL +++P + D V +
Sbjct: 88 TDKTEITVETLAGIKTLQLFVENGKVAKVRVDMGSPILTPAEIPV---VAEGDKAVDEPI 144
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
VDG+ +++TCVSMGNPH V + V+NL + EIGPKFE H FP R NT
Sbjct: 145 LVDGKEYHMTCVSMGNPHAVVYVDD------VNNLPIEEIGPKFESHERFPRRVNT 194
>C6D4H0_PAESJ (tr|C6D4H0) Diaminopimelate epimerase OS=Paenibacillus sp. (strain
JDR-2) GN=dapF PE=3 SV=1
Length = 278
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 107/186 (57%), Gaps = 22/186 (11%)
Query: 9 PRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
P E A C+R FGIGADG+++ +P + D+ MRI NSDGSE E CGN +RC A++
Sbjct: 24 PGNVAELAKNQCNRFFGIGADGLVYILP-SEVADFRMRIINSDGSEAEQCGNAIRCAAKY 82
Query: 69 IAELENLQGKQSFTIHT-GAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKD 123
I + L K+ TI T GAG +++ DGK V+VDMG PIL VPT + +
Sbjct: 83 IYD-NGLTDKEELTIETLGAGAQTVQLEVADGKVQQVRVDMGAPILNGLQVPTTV---DE 138
Query: 124 DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVD---NLNLAEIGPKFEHHAV 180
D V++ + VDG + T VSMGNPHCV + VD N +LA GPK E H +
Sbjct: 139 DRVIEHPIEVDGREFRFTAVSMGNPHCVIY---------VDDAANFDLATWGPKLETHPM 189
Query: 181 FPARTN 186
FP + N
Sbjct: 190 FPRKIN 195
>C7H523_9FIRM (tr|C7H523) Diaminopimelate epimerase OS=Faecalibacterium
prausnitzii A2-165 GN=dapF PE=3 SV=1
Length = 279
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 104/190 (54%), Gaps = 15/190 (7%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVI-FAMPGTNGTDYSMRIFNSDGSEPEMCG 59
+D R S P A +L R+F +GADG+I P T G D MRIFN+DGSE +MCG
Sbjct: 18 LDCRASGVPADIAALAQRLSARHFSVGADGIICICAPVTPGADGRMRIFNADGSEAQMCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
NGVRC A ++ + K I T +G+ Q +V+MG S +P LP
Sbjct: 78 NGVRCVAEWL--YTHGVEKPVLAIDTNSGVKRITRQGAQLWQVEMG----TYSTLPADLP 131
Query: 120 ANK--DDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEH 177
A +D +V L V+G+ W VTC+S+GNPHCVT VD+L L IGP FEH
Sbjct: 132 AIHMGEDPLVDQPLTVEGKVWKVTCISVGNPHCVTVVED------VDSLKLEAIGPAFEH 185
Query: 178 HAVFPARTNT 187
HA FP R NT
Sbjct: 186 HANFPERINT 195
>Q1K3Q6_DESAC (tr|Q1K3Q6) Diaminopimelate epimerase OS=Desulfuromonas acetoxidans
DSM 684 GN=dapF PE=3 SV=1
Length = 282
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E AV++ DR+FG+G+DG+I +P ++ D MR+FN+DGSE +MCGNG+RC A+++ + +
Sbjct: 28 ELAVRISDRHFGVGSDGLILILP-SDCADARMRMFNADGSEAQMCGNGIRCVAKYLCDQQ 86
Query: 74 NLQGKQSFTIHTGAGLIVPEIQED------GKVKVDMGEPILKASDVPTRLPANKDDAVV 127
+ +G Q TI T AG++ ++ D +V V+MG+P L+ +P P + D +
Sbjct: 87 SDRGSQ-LTIETLAGVLSVDVTADTENPAISQVTVNMGQPRLQRGQIPMTGP--QQDQAL 143
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ E+ V T+ +CVSMGNPHCV + V+ ++A G E+H +FP R N
Sbjct: 144 EVEIRVKNRTFTASCVSMGNPHCVVYVDD------VEQFDVAYWGALLENHPLFPERIN 196
>A6BDH2_9FIRM (tr|A6BDH2) Putative uncharacterized protein OS=Dorea longicatena
DSM 13814 GN=DORLON_00335 PE=3 SV=1
Length = 282
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 15/179 (8%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P A + DR+FGIG+DG+I P + D+ M ++N+DGS EMCGNG+RC A+++ +
Sbjct: 27 PAVARYVSDRHFGIGSDGLIMINP-SEVADFEMEMYNADGSRGEMCGNGIRCVAKYVYDY 85
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVK 128
L K ++ T G+ ++ EDGK VKVDMG+P LK+ +P ++++ V+
Sbjct: 86 -GLTDKTQISVETLGGIKYLDLTVEDGKVVLVKVDMGKPELKSDLIPI---ISENEKVID 141
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG+ +++T VSMGNPH V + V NL+L +IGPKFE+H FP R NT
Sbjct: 142 EPIEVDGQVYHMTGVSMGNPHTVIYVDD------VKNLDLEKIGPKFENHERFPKRINT 194
>C5AEZ7_BURGB (tr|C5AEZ7) Diaminopimelate epimerase OS=Burkholderia glumae
(strain BGR1) GN=dapF PE=3 SV=1
Length = 288
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+TPE+ L DR+FG+GAD V+ P +G D+ RIFN DG E E CGNG RCF RF+
Sbjct: 27 LTPERVRALADRHFGVGADQVLLVERPTLDGADFRYRIFNCDGGEVEHCGNGARCFVRFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---TRLPANKDDAV 126
+ + L K + + GL+ +QE+G+V VDMG P+ + + VP L A ++ A
Sbjct: 87 HD-KGLTDKTTVRVQVSHGLLTLTLQENGEVVVDMGSPVFEPARVPFDAAGLDARREGAD 145
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
L V G T ++ VSMGNPH V V+ +AE GP EHHA FP R N
Sbjct: 146 TLFPLEVGGTTRWISVVSMGNPHAVQVVDD------VETFPVAEEGPLVEHHARFPQRVN 199
Query: 187 T 187
Sbjct: 200 A 200
>Q3ZXC7_DEHSC (tr|Q3ZXC7) Diaminopimelate epimerase OS=Dehalococcoides sp.
(strain CBDB1) GN=dapF PE=3 SV=1
Length = 284
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 105/178 (58%), Gaps = 10/178 (5%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P+ A+ +C R+FG GADG++ +P + D+ MRIFN+DGSE E+CGNG+RC +IA
Sbjct: 26 PKLALHMCHRHFGAGADGLMLILP-SEKADFRMRIFNADGSEAEICGNGLRCLIHYIAVN 84
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRL---PANKDDAVVKS 129
+ L + +I T AG+ +I +DG+++ MG+P+ +A +P P + + ++
Sbjct: 85 KLLGNRDELSIETLAGMRHAQIFKDGRIRTTMGKPMFEAHQIPVAAEPDPKHYNGQLISD 144
Query: 130 -ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
LN++ V+ VSMGNPH + F TK V+ L E+G + E H FP RTN
Sbjct: 145 FPLNINNRRVLVSLVSMGNPHAIHFCTKP-----VEEFPLGEVGSQVEIHKAFPKRTN 197
>D3SIJ1_DEHSG (tr|D3SIJ1) Diaminopimelate epimerase OS=Dehalococcoides sp.
(strain GT) GN=DehalGT_0631 PE=3 SV=1
Length = 284
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 105/178 (58%), Gaps = 10/178 (5%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P+ A+ +C R+FG GADG++ +P + D+ MRIFN+DGSE E+CGNG+RC +IA
Sbjct: 26 PKLALHMCHRHFGAGADGLMLILP-SEKADFRMRIFNADGSEAEICGNGLRCLIHYIAVN 84
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRL---PANKDDAVVKS 129
+ L + +I T AG+ +I +DG+++ MG+P+ +A +P P + + ++
Sbjct: 85 KLLGNRDELSIETLAGMRHAQIFKDGRIRTTMGKPMFEAHQIPVAAEPDPKHYNGQLISD 144
Query: 130 -ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
LN++ V+ VSMGNPH + F TK V+ L E+G + E H FP RTN
Sbjct: 145 FPLNINNRRVLVSLVSMGNPHAIHFCTKP-----VEEFPLGEVGSQVEIHKAFPKRTN 197
>C0C049_9CLOT (tr|C0C049) Putative uncharacterized protein OS=Clostridium
hylemonae DSM 15053 GN=CLOHYLEM_05443 PE=3 SV=1
Length = 277
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 106/180 (58%), Gaps = 17/180 (9%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE A L DR+FG+G+DG+I P + D+ M ++N+DGS EMCGNG+RC A+++ +
Sbjct: 27 PEAARILSDRHFGVGSDGLIMICP-SEKADFEMEMYNADGSRGEMCGNGIRCVAKYVYDY 85
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLP-ANKDDAVV 127
L K + ++ T G+ ++ +DGK +KVDMG P LK P R+P + DAV+
Sbjct: 86 -GLTDKTNISVETLGGVKYLDLTVKDGKAVLIKVDMGRPELK----PERIPIVSGGDAVI 140
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG + +T VSMGNPH V F V L L +GPKFE+H FP R NT
Sbjct: 141 SEPIVVDGAIYRMTGVSMGNPHAVIFVDD------VKGLELEAVGPKFENHERFPKRVNT 194
>D2BHI7_DEHSV (tr|D2BHI7) Diaminopimelate epimerase OS=Dehalococcoides sp.
(strain VS) GN=dapF PE=3 SV=1
Length = 284
Score = 130 bits (327), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 10/183 (5%)
Query: 8 EPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFAR 67
E R P+ A+ +C R+FG GADG++ +P D+ MRIFN+DGSE E+CGNG+RC
Sbjct: 21 EERDWPKLALHMCHRHFGAGADGLMLLLPSAK-ADFRMRIFNADGSEAEICGNGLRCLIH 79
Query: 68 FIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRL---PANKDD 124
+I + + + +I T AG+ +I +DG+++ MG+P+ +A +P P +
Sbjct: 80 YIVANKLIGSRDELSIETLAGIRHAQIFKDGRIRTTMGKPMFEAHQIPVAAEPDPKHYSG 139
Query: 125 AVVKS-ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPA 183
++ LN++ V+ VSMGNPH + F TK ++ L L E+G E H FP
Sbjct: 140 QLISDFPLNINNRRVLVSLVSMGNPHAIHFCTKPVEEFL-----LGEVGSLVETHKAFPK 194
Query: 184 RTN 186
RTN
Sbjct: 195 RTN 197
>D3T2Y1_THEIA (tr|D3T2Y1) Diaminopimelate epimerase OS=Thermoanaerobacter
italicus (strain DSM 9252 / Ab9) GN=dapF PE=3 SV=1
Length = 274
Score = 130 bits (326), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 107/179 (59%), Gaps = 15/179 (8%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
E AVKLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E
Sbjct: 25 SELAVKLCDRHFGIGADGLLVVEP-SGIADIRMRIFNADGSEAEMCGNGSRCFAKYVYE- 82
Query: 73 ENLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKDDAVVK 128
+ K+ T+ T AG+I+PE+ ++GK VKV MG PI + S +P + K +
Sbjct: 83 RGIVKKEKMTVETLAGVIMPEVFVKNGKVESVKVYMGNPIFETSKIPIKTDKQK---FIN 139
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ +DG+ + +T + +G PH + F ++++ + E+G K E ++F TN
Sbjct: 140 EPVKIDGKVYKLTSIRVGVPHTIVFVESLDENM------IKELGSKIEKSSLFSQGTNV 192
>D6KQD6_9FIRM (tr|D6KQD6) Diaminopimelate epimerase OS=Veillonella sp. 6_1_27
GN=dapF PE=3 SV=1
Length = 277
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 105/178 (58%), Gaps = 21/178 (11%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A++LCDR GIGADG+ +P + D MRI NSDGSE EMCGN +RCFA++ E
Sbjct: 30 AIRLCDRRTGIGADGLAILVP-SETCDVRMRIINSDGSEAEMCGNAIRCFAKYAYE-HGE 87
Query: 76 QGKQSFTIHTGAGLIVPEIQ-EDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K++FTI T AG++ P + E+G +V VDMG+P KA D+P + +K V+ +L
Sbjct: 88 TTKETFTIETLAGVMKPTLTIENGIVTQVTVDMGKPFFKAQDIPMNVNMDK---VIDVDL 144
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
NV+GET V+ V +G PH F +D++ A + GP E H FPA TN
Sbjct: 145 NVNGETVTVSSVLLGVPHTEVF---------IDDITKAPVTTQGPILEKHDAFPANTN 193
>D6KJW7_9FIRM (tr|D6KJW7) Diaminopimelate epimerase OS=Veillonella sp. 3_1_44
GN=dapF PE=3 SV=1
Length = 277
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 105/178 (58%), Gaps = 21/178 (11%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A++LCDR GIGADG+ +P + D MRI NSDGSE EMCGN +RCFA++ E
Sbjct: 30 AIRLCDRRTGIGADGLAILVP-SETCDVRMRIINSDGSEAEMCGNAIRCFAKYAYE-HGE 87
Query: 76 QGKQSFTIHTGAGLIVPEIQ-EDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K++FTI T AG++ P + E+G +V VDMG+P KA D+P + +K V+ +L
Sbjct: 88 TTKETFTIETLAGVMKPTLTIENGIVTQVTVDMGKPFFKAQDIPMNVNMDK---VIDVDL 144
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
NV+GET V+ V +G PH F +D++ A + GP E H FPA TN
Sbjct: 145 NVNGETVTVSSVLLGVPHTEVF---------IDDITKAPVTTQGPILEKHDAFPANTN 193
>D1YPZ9_9FIRM (tr|D1YPZ9) Diaminopimelate epimerase OS=Veillonella parvula ATCC
17745 GN=dapF PE=3 SV=1
Length = 277
Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 105/178 (58%), Gaps = 21/178 (11%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A++LCDR GIGADG+ +P + D MRI NSDGSE EMCGN +RCFA++ E
Sbjct: 30 AIRLCDRRTGIGADGLAILVP-SETCDVRMRIINSDGSEAEMCGNAIRCFAKYAYE-HGE 87
Query: 76 QGKQSFTIHTGAGLIVPEIQ-EDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K++FTI T AG++ P + E+G +V VDMG+P KA D+P + +K V+ +L
Sbjct: 88 TTKETFTIETLAGVMKPTLTIENGIVTQVTVDMGKPFFKAQDIPMNVNMDK---VIDVDL 144
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
NV+GET V+ V +G PH F +D++ A + GP E H FPA TN
Sbjct: 145 NVNGETVTVSSVLLGVPHTEVF---------IDDITKAPVTTQGPILEKHDAFPANTN 193
>A5WAU5_PSEP1 (tr|A5WAU5) Diaminopimelate epimerase OS=Pseudomonas putida (strain
F1 / ATCC 700007) GN=Pput_5137 PE=3 SV=1
Length = 276
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 103/186 (55%), Gaps = 18/186 (9%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGV-IFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S + P+ A + DR+ GIG D + I P D+ RIFN+DGSE E CGNG RC
Sbjct: 22 SQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDFRYRIFNADGSEVEQCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ + + L K+ + T +G+IV ++Q DG+V V+MG P +P +P D
Sbjct: 82 FARFVLD-KRLTAKKRIRVETKSGIIVLDVQNDGQVSVNMGPPRF----IPAEIPFVADA 136
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVF 181
L VDG+ +++ VSMGNPH V L VD+++ A E+GPK E+H F
Sbjct: 137 QAPSYPLVVDGQLYSIAAVSMGNPHAV---------LRVDDVSTAPVHELGPKIENHPRF 187
Query: 182 PARTNT 187
P R N
Sbjct: 188 PQRVNA 193
>A5FRC6_DEHSB (tr|A5FRC6) Diaminopimelate epimerase OS=Dehalococcoides sp.
(strain BAV1) GN=DehaBAV1_0670 PE=3 SV=1
Length = 284
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 8 EPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFAR 67
E + P+ A+ +C R+FG GADG++ +P + D+ MRIFN+DGSE E+CGNG+RC
Sbjct: 21 EEQDWPKLALHMCHRHFGAGADGLMLILP-SEKADFRMRIFNADGSEAEICGNGLRCLIH 79
Query: 68 FIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRL---PANKDD 124
+IA + L +I T AG+ +I +DG+++ MG+P+ +A +P P + +
Sbjct: 80 YIAVNKLLGNLDELSIETLAGMRHAQIFKDGRIRTTMGKPMFEAHQIPVAAEPDPKHYNG 139
Query: 125 AVVKS-ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPA 183
++ LN++ V+ VSMGNPH + F TK V+ L E+G + E H FP
Sbjct: 140 QLISDFPLNINNRRVLVSLVSMGNPHAIHFCTKP-----VEEFPLGEVGSQVEIHKAFPK 194
Query: 184 RTN 186
RTN
Sbjct: 195 RTN 197
>D7APG8_9THEO (tr|D7APG8) Diaminopimelate epimerase OS=Thermoanaerobacter
mathranii subsp. mathranii str. A3 GN=Tmath_1370 PE=4
SV=1
Length = 274
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 106/178 (59%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A KLCDR+FGIGADG++ P + D MRIFN+DGSE EMCGNG RCFA+++ E
Sbjct: 26 ELAAKLCDRHFGIGADGLLVVEP-SGIADIRMRIFNADGSEAEMCGNGSRCFAKYVYE-R 83
Query: 74 NLQGKQSFTIHTGAGLIVPEI-QEDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K+ + T AG+I+PE+ ++GK VKV MG PI + S +P + K +
Sbjct: 84 GIVKKEKMAVETLAGVIMPEVFVKNGKVESVKVYMGNPIFETSKIPIKTDKQK---FINE 140
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ +DG+ + +T + +G PH + F ++++ + E+G K E ++FP TN
Sbjct: 141 PVKIDGKVYKLTSIRVGVPHTIVFVESLDENM------IKELGSKIEKSSLFPQGTNV 192
>D0CJ51_9SYNE (tr|D0CJ51) Diaminopimelate epimerase OS=Synechococcus sp. WH 8109
GN=dapF PE=3 SV=1
Length = 366
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 98/178 (55%), Gaps = 14/178 (7%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P ++CDR FG+G DG+I A+P + MRI N+DGSE EMCGNG+RC AR++A+
Sbjct: 33 PAWVSRICDRRFGVGGDGLILALPPQAEGELRMRILNADGSEAEMCGNGIRCLARYLADT 92
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELN 132
+ + + I T AG+I PE+ D +++VDMG P L +PT + +D + + L
Sbjct: 93 DGDAPGRRWDIETLAGMIRPELMADRQLRVDMGPPFLTPEAIPTTV--MPEDGLPQGVLL 150
Query: 133 VDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFEHHAVFPARTNT 187
++ E V V MGNPH V + VD+L G E H FPA+TN
Sbjct: 151 LEDEQIRVASVGMGNPHVV---------VPVDDLASIPFDTWGAALEVHPAFPAKTNV 199
>B6FUM8_9CLOT (tr|B6FUM8) Putative uncharacterized protein OS=Clostridium nexile
DSM 1787 GN=CLONEX_03858 PE=3 SV=1
Length = 289
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 106/179 (59%), Gaps = 15/179 (8%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE A K+ +RNFGIG+DG+I P ++ D+ M ++N+DGS EMCGNG+RC +++ +
Sbjct: 39 PEMAKKVSNRNFGIGSDGLIMINP-SDVADFEMEMYNADGSRSEMCGNGIRCVGKYVYDY 97
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVK 128
L K+ ++ T AG+ ++ EDGK VKVDMG P L ++P N+ V+
Sbjct: 98 -GLTEKEHISVETLAGIKYLDLTVEDGKVKLVKVDMGSPELVPENIPIVADGNR---VID 153
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+NV+G + +T VSMGNPH V + V L++ IGP FE+H FP R NT
Sbjct: 154 EPINVNGTEYRMTGVSMGNPHAVVYVED------VKGLDIETIGPAFENHERFPNRVNT 206
>B7S2B6_9GAMM (tr|B7S2B6) Diaminopimelate epimerase OS=marine gamma
proteobacterium HTCC2148 GN=dapF PE=3 SV=1
Length = 276
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 101/183 (55%), Gaps = 12/183 (6%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S ++ P + KL DR FG+G D V+ P G+ D+ RIFN+DG E E CGNG RC
Sbjct: 22 SQRCKLRPREIRKLADRRFGVGCDQVLIVEPPGSPDVDFRYRIFNADGGEVEQCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ + L K+ ++ T G+I ++++ +V+VDMG PIL+ P ++P + +
Sbjct: 82 FARFVRD-NKLTSKRIISVETACGIIQLRLRDNNQVEVDMGAPILE----PQKIPFDAPE 136
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
L V+ + +SMGNPH V VD++N+ +GP EHH FP R
Sbjct: 137 EATSYPLQVEENVLEIGALSMGNPHSVCRVDD------VDSINIEHLGPLIEHHPRFPQR 190
Query: 185 TNT 187
TN
Sbjct: 191 TNA 193
>D5CU55_SIDLE (tr|D5CU55) Diaminopimelate epimerase OS=Sideroxydans
lithotrophicus (strain ES-1) GN=dapF PE=3 SV=1
Length = 276
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 18/181 (9%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
++PEQ + DR+FGIG D V+ + D+ RIFN+DG E E CGNG RCF RF+
Sbjct: 27 LSPEQIRYIADRHFGIGCDQVLLVEKTQRDEADFRYRIFNADGGEVEQCGNGARCFVRFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ +NL K+ + T +GLI P ++EDG++ V+MG PI P ++P D V
Sbjct: 87 HD-QNLTSKREIVVETKSGLISPRLEEDGRITVNMGLPIFD----PAQIPFVSDSTEVIQ 141
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
L V E+ +T VSMGNPH V +VD++ A + GP E H FP R N
Sbjct: 142 PLQVGNESVQITVVSMGNPHAVQ---------VVDDVETAPVATQGPFIEIHPRFPKRVN 192
Query: 187 T 187
Sbjct: 193 V 193
>A3JE40_9ALTE (tr|A3JE40) Diaminopimelate epimerase OS=Marinobacter sp. ELB17
GN=dapF PE=3 SV=1
Length = 328
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 101/178 (56%), Gaps = 12/178 (6%)
Query: 10 RVTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
R+ PE +L DR+FGIG D ++ P G D+ RIFN+DGSE E CGNG RCFARF
Sbjct: 59 RLRPEMIRELADRHFGIGFDQLLVVEPPGLPDVDFRYRIFNADGSEVEQCGNGARCFARF 118
Query: 69 IAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVK 128
+ + + L K+ + T G+I + +DG VKVDMG P L+ P +P + D+
Sbjct: 119 VRD-QRLTNKKVMRVQTAGGIIELRVGKDGLVKVDMGVPRLE----PATVPFSADEFAPV 173
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
L+V+G+ ++ VSMGNPH V VD+ +A +GP E H FPA+ N
Sbjct: 174 YNLDVNGQNIELSVVSMGNPHGVILTDD------VDSAPVATLGPLLEKHWRFPAKAN 225
>C4Z3I0_EUBE2 (tr|C4Z3I0) Diaminopimelate epimerase OS=Eubacterium eligens
(strain ATCC 27750 / VPI C15-48) GN=dapF PE=3 SV=1
Length = 305
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 114/196 (58%), Gaps = 26/196 (13%)
Query: 13 PEQ-AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
P Q A+ L DR+FGIG+DG+I + ++ D+ M ++N+DGS+ +MCGNG+RC +F+ +
Sbjct: 32 PSQVAIDLSDRHFGIGSDGLIL-IKNSDKADFFMEMYNADGSQGQMCGNGIRCVGKFVYD 90
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQ--EDGKV---KVDMGEPILKASDVPTRLPANKD--- 123
L K + TI T AG+ + E++ DGKV +V+MG PIL+A+ +P K+
Sbjct: 91 -NGLTDKTTVTIDTLAGVKILELKTGADGKVETARVNMGAPILEAAQIPVDTKGLKEYKG 149
Query: 124 ------------DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI 171
VV + V+G+ + VT VSMGNPH + + +KD+ + + +I
Sbjct: 150 CEIETIAGKVVKTPVVDETIVVEGKEYKVTAVSMGNPHAIVY---LDKDIDIKKFEIEKI 206
Query: 172 GPKFEHHAVFPARTNT 187
GP FE+H FP R NT
Sbjct: 207 GPFFENHKAFPERINT 222
>B0G1Z4_9FIRM (tr|B0G1Z4) Putative uncharacterized protein OS=Dorea
formicigenerans ATCC 27755 GN=DORFOR_00254 PE=3 SV=1
Length = 288
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 109/181 (60%), Gaps = 14/181 (7%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE A + +R+FGIG+DG+I P + D+ M ++N+DGS EMCGNG+RC A+++ +
Sbjct: 33 PEVAKIVSNRHFGIGSDGLIMINP-SKVADFEMEMYNADGSRGEMCGNGIRCVAKYVYDY 91
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKD--DAV 126
L K ++ T G+ ++ +DGK V+VDMGEP L +P + D D V
Sbjct: 92 -GLTDKTHISVETLGGIKYLDLTVKDGKVALVRVDMGEPELDPEKIPIIMKGYSDETDRV 150
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ +++ VDG+ +++T VSMGNPH V + V L++ +IGPKFE+H FP R N
Sbjct: 151 LNAQIKVDGKEYHMTGVSMGNPHDVVYIDN------VQGLDIEKIGPKFENHERFPQRIN 204
Query: 187 T 187
T
Sbjct: 205 T 205
>Q3Z8H4_DEHE1 (tr|Q3Z8H4) Diaminopimelate epimerase OS=Dehalococcoides
ethenogenes (strain 195) GN=dapF PE=3 SV=1
Length = 284
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 99/175 (56%), Gaps = 10/175 (5%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A+ +C R+FG GADG++ +P D+ MRIFN+DGSE E+CGNG+RC +IA +
Sbjct: 29 ALHMCHRHFGAGADGLMLILPSAK-ADFRMRIFNADGSEAEICGNGLRCLIHYIAANNLI 87
Query: 76 QGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRL---PANKDDAVVKS-EL 131
+ +I T AG+ +I DG+++ MG+P+ +A +P P + ++ L
Sbjct: 88 GNRDELSIETLAGIRNAQIFADGRIRTTMGKPMFEAHQIPVAAEPDPKYYNGQLISDFPL 147
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
N++ ++ VSMGNPH + F TK V+ L E+GP E H FP RTN
Sbjct: 148 NINNRRLLLSLVSMGNPHAIHFCTKS-----VEEFPLGEVGPLVETHKAFPKRTN 197
>D1BPE4_VEIPT (tr|D1BPE4) Diaminopimelate epimerase OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=dapF
PE=3 SV=1
Length = 277
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 105/178 (58%), Gaps = 21/178 (11%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A++LCDR GIGADG+ +P + D MRI NSDGSE EMCGN +RCFA++ E
Sbjct: 30 AIRLCDRRTGIGADGLAILVP-SETCDVRMRIINSDGSEAEMCGNAIRCFAKYAYE-HGE 87
Query: 76 QGKQSFTIHTGAGLIVPEIQ-EDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K++FTI T AG++ P + E+G +V VDMG+P KA D+P + +K V+ +L
Sbjct: 88 TTKETFTIETLAGVMKPTLTIENGIVTQVTVDMGKPFFKAQDIPMNVNMDK---VIDVDL 144
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
+++GET V+ V +G PH F +D++ A + GP E H FPA TN
Sbjct: 145 DINGETVTVSSVLLGVPHTEVF---------IDDITKAPVTTQGPILEKHDAFPANTN 193
>A6F216_9ALTE (tr|A6F216) Diaminopimelate epimerase OS=Marinobacter algicola
DG893 GN=MDG893_14710 PE=3 SV=1
Length = 327
Score = 127 bits (320), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 101/181 (55%), Gaps = 18/181 (9%)
Query: 10 RVTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
R+ PE +L DRNFGIG D ++ P G D+ RIFNSDGSE E CGNG RCFARF
Sbjct: 41 RLRPEMIRELADRNFGIGFDQLLVVEPPGLPDVDFRYRIFNSDGSEVEQCGNGARCFARF 100
Query: 69 IAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVK 128
+ + + L K+ + T G+I + G V VDMG P L +P A++ V
Sbjct: 101 VRD-QRLTNKKVIRVQTAKGVIELRVGRAGMVTVDMGVPELNPPAIP--FAADRRKDVYT 157
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPART 185
EL G+T ++ VSMGNPH V LLVD+++ A E GP+ E+H FPAR
Sbjct: 158 VELG--GDTVELSAVSMGNPHGV---------LLVDDVDTAPVGEYGPRLENHPRFPARA 206
Query: 186 N 186
N
Sbjct: 207 N 207
>B5YL43_THEYD (tr|B5YL43) Diaminopimelate epimerase OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=dapF PE=3 SV=1
Length = 279
Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 100/174 (57%), Gaps = 11/174 (6%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A+ C+R FGIGAD ++ P + D+ M+IFN+DGSE EMCGNG+RCFA++I +
Sbjct: 31 EFAIHYCNRRFGIGADQLLLLYP-SQIADFKMKIFNADGSEVEMCGNGIRCFAKYIWD-R 88
Query: 74 NLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNV 133
L K + T AG+I P+ + V+VDMG+P + +P + + D+ L V
Sbjct: 89 GLSNKDVLEVETLAGIIKPK-KVGELVQVDMGKPEFHPNKIPVDV---EGDSAFDLMLEV 144
Query: 134 DGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
G + CVSMGNPH V F +E K N + + GP E+H +FP RTN
Sbjct: 145 SGWHARINCVSMGNPHAVIFLDEEPK-----NFAVTKYGPLIENHPIFPKRTNV 193
>D0LTS4_HALO1 (tr|D0LTS4) Diaminopimelate epimerase OS=Haliangium ochraceum
(strain DSM 14365 / JCM 11303 / SMP-2) GN=dapF PE=3 SV=1
Length = 326
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 20/190 (10%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
+P LC+R FGIGADG++ +P D +R+ NSDGSE EMCGNG+RC +++ E
Sbjct: 35 SPAVVRALCERRFGIGADGIMAVLPALGDGDARLRVLNSDGSEAEMCGNGLRCVVKYLGE 94
Query: 72 LE-NLQGKQSFTIHTGAGLIVPEIQE------DG------KVKVDMGEPILKASDVPTRL 118
+ L+G+++ I TGAGL+ DG +V VDMG P L+ + +P
Sbjct: 95 RDPALRGRETLNIETGAGLLRCRAHRSDTALGDGGIAAIEQVTVDMGRPRLERAQIPMHG 154
Query: 119 PANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAE-IGPKFEH 177
PA ++ + L + G ++T VSMGNPH + F + LAE IGP E
Sbjct: 155 PA--EERCISEPLAIAGRPLDITAVSMGNPHAIAFVDVHGA----EQRALAELIGPSLER 208
Query: 178 HAVFPARTNT 187
H FP TN
Sbjct: 209 HPWFPRHTNV 218
>A1TXX7_MARAV (tr|A1TXX7) Diaminopimelate epimerase OS=Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8) GN=dapF PE=3 SV=1
Length = 308
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 10 RVTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
R+ P+ +L DRNFGIG D ++ P G D+ RIFN+DGSE E CGNG RCFARF
Sbjct: 35 RLAPDTIRELADRNFGIGFDQLLVVEPPGLPDVDFRYRIFNADGSEVEQCGNGARCFARF 94
Query: 69 IAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVK 128
+ + + L K+ + T G+I ++ DG V V+MG P L +P KD V
Sbjct: 95 VRD-QRLTNKRVIRVQTAKGVIELKVGRDGLVAVNMGVPELNPPAIPFAADQRKDVYTV- 152
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPART 185
+V+G+T ++ +SMGNPH V L+VDN++ A +GP+ E H FPAR
Sbjct: 153 ---DVNGQTVELSAISMGNPHGV---------LVVDNVDTAPVESLGPQLEKHPRFPARA 200
Query: 186 N 186
N
Sbjct: 201 N 201
>D4RZ76_9FIRM (tr|D4RZ76) Diaminopimelate epimerase OS=Butyrivibrio crossotus DSM
2876 GN=dapF PE=3 SV=1
Length = 277
Score = 126 bits (317), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 17/179 (9%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
+ A+++ DR+FGIG+DG+I P ++ D+ M ++N+DGS+ +MCGNG+RC +F+ +
Sbjct: 28 KTAIEVSDRHFGIGSDGLILIKP-SDKADFFMEMYNADGSQGKMCGNGIRCVGKFVYDY- 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKD-DAVVK 128
L K T+ T AG+ + + K V+V+MG+P P +P D D V+
Sbjct: 86 GLTDKTEITVDTLAGIKYLSLNIENKAVKSVRVNMGKPEF----TPALIPVKADGDVVID 141
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
E G + +TCVSMGNPHC+T+ + NL + +IGP FE+ ++FP R NT
Sbjct: 142 KEFIFGGNAYRITCVSMGNPHCITYMDD------IKNLEIEKIGPVFENDSIFPDRVNT 194
>D4KBN1_9FIRM (tr|D4KBN1) Diaminopimelate epimerase OS=Faecalibacterium
prausnitzii SL3/3 GN=dapF PE=3 SV=1
Length = 279
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 102/189 (53%), Gaps = 13/189 (6%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVI-FAMPGTNGTDYSMRIFNSDGSEPEMCG 59
+D R S P + +L R+F IGADG+I P T G D MRIFN+DGSE +MCG
Sbjct: 18 LDCRTSGVPENIAALSERLSRRHFSIGADGIICICAPVTAGADAMMRIFNADGSEGKMCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
NG+RC A ++ + K I T +GL +G +V+MG A+ +P
Sbjct: 78 NGIRCVAEWL--YTHGMAKPKLAIDTLSGLKTVARMGEGLWQVEMGAYTAMAAALPA--- 132
Query: 120 ANKDDA-VVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHH 178
N + +V L V+ W VTC+S+GNPHCVT + VD+L L +IGP FEHH
Sbjct: 133 VNMGEGPLVDLPLEVEENLWRVTCISVGNPHCVTIVPE------VDSLKLEQIGPGFEHH 186
Query: 179 AVFPARTNT 187
FP R NT
Sbjct: 187 ENFPERINT 195
>A8S7U5_9FIRM (tr|A8S7U5) Diaminopimelate epimerase OS=Faecalibacterium
prausnitzii M21/2 GN=dapF PE=3 SV=1
Length = 279
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 102/189 (53%), Gaps = 13/189 (6%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVI-FAMPGTNGTDYSMRIFNSDGSEPEMCG 59
+D R S P + +L R+F IGADG+I P T G D MRIFN+DGSE +MCG
Sbjct: 18 LDCRTSGVPENIAALSERLSRRHFSIGADGIICICAPVTAGADAMMRIFNADGSEGKMCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLP 119
NG+RC A ++ + K I T +GL +G +V+MG A+ +P
Sbjct: 78 NGIRCVAEWL--YTHGMAKPKLAIDTLSGLKTVARMGEGLWQVEMGAYTAMAAALPA--- 132
Query: 120 ANKDDA-VVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHH 178
N + +V L V+ W VTC+S+GNPHCVT + VD+L L +IGP FEHH
Sbjct: 133 VNMGEGPLVDLPLEVEENLWRVTCISVGNPHCVTIVPE------VDSLKLEQIGPGFEHH 186
Query: 179 AVFPARTNT 187
FP R NT
Sbjct: 187 ENFPERINT 195
>B9MLW7_ANATD (tr|B9MLW7) Diaminopimelate epimerase OS=Anaerocellum thermophilum
(strain DSM 6725 / Z-1320) GN=dapF PE=3 SV=1
Length = 278
Score = 126 bits (317), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 21/180 (11%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A K+C R+ G+GADG++ + + D MRI NSDGSE EMCGNG+RCFA+++ E +
Sbjct: 30 AKKMCHRHIGVGADGILLVLD-SKLADIRMRIINSDGSEAEMCGNGIRCFAKYVFE-RGI 87
Query: 76 QGKQSFTIHTGAGLIVPE--IQEDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
F + T AG+I PE + E G KVKV+MG+P K D+P + D + +
Sbjct: 88 VKSTKFKVETLAGIIEPELFVNEYGLVDKVKVNMGKPSFKREDIPMQGDPKSD--AINTS 145
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNL---NLAEIGPKFEHHAVFPARTNT 187
+ VDG + +T + MG PH + F VD+L ++ +GPK E H VFP +TN
Sbjct: 146 IVVDGNEYRITSLLMGVPHTILF---------VDDLEKVDIYTLGPKIEKHEVFPRKTNV 196
>D4DPB0_NEIEG (tr|D4DPB0) Diaminopimelate epimerase OS=Neisseria elongata subsp.
glycolytica ATCC 29315 GN=dapF PE=3 SV=1
Length = 282
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query: 20 CDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
DR+ GIG D ++ P + D+ RIFN+DG E E CGNG RCFARF+A+ + L GK
Sbjct: 37 ADRHTGIGFDQLLLVERPTSEQADFRYRIFNADGGEVEQCGNGARCFARFVAD-KGLSGK 95
Query: 79 QSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGETW 138
Q + T G+IVP++ E G V V+MG+P + S++P N ++ ++ +DG
Sbjct: 96 QEIRVETARGIIVPKLAEHGLVTVNMGQPRFRPSEIPFLPLENTSGETLQYDVRLDGGNV 155
Query: 139 NVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
V CV+MGNPH V T EN ++ +AE+G + E H FP + N
Sbjct: 156 TVGCVNMGNPHAVL--TVEN----TESAAVAELGAQIEPHPQFPEKVNV 198
>C4FN33_9FIRM (tr|C4FN33) Diaminopimelate epimerase OS=Veillonella dispar ATCC
17748 GN=dapF PE=3 SV=1
Length = 277
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 27/191 (14%)
Query: 3 NRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGV 62
N+D T+ A++LCDR GIGADG++ +P ++ D MRI NSDGSE EMCGNG+
Sbjct: 23 NKDYTD------LAIRLCDRRTGIGADGLVIVVP-SDTCDVRMRIINSDGSEAEMCGNGI 75
Query: 63 RCFARFIAELENLQGKQSFTIHTGAGLIVPEIQ-EDG---KVKVDMGEPILKASDVPTRL 118
RCFA++ E + K++FTI T AG++ P + E+G V VDMG+P + DVP +
Sbjct: 76 RCFAKYAYEHGEIT-KETFTIETLAGIMKPTLTIENGVVTLVTVDMGKPFFNSKDVPMNV 134
Query: 119 PANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKF 175
+K V+ +++V+GET V+ V +G PH ++ V+++ A + GP
Sbjct: 135 DMDK---VIDVDIDVNGETVTVSSVLLGVPH---------TEVYVEDITKAPVTTQGPIL 182
Query: 176 EHHAVFPARTN 186
E H FP+ TN
Sbjct: 183 EKHDAFPSNTN 193
>D5R8I5_9FIRM (tr|D5R8I5) Diaminopimelate epimerase OS=Clostridium lentocellum
DSM 5427 GN=dapF PE=3 SV=1
Length = 283
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 104/173 (60%), Gaps = 15/173 (8%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
+ DR+FGIG+DG++ +P + D+ MR+FN+DGSE +MCGN RC +F+ E K
Sbjct: 35 ISDRHFGIGSDGLVIILP-SEIADFRMRMFNADGSEGKMCGNATRCIGKFVYE-TGYTDK 92
Query: 79 QSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKSELNVD 134
++ ++ T +G+ + EDGK V+VDMG+ IL D+P + + + + +++D
Sbjct: 93 KNISLETLSGIKYLTLTVEDGKVVYVEVDMGKAILSPQDIPV---ISDQETFINTPISID 149
Query: 135 GETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
E + TCVSMGNPH V + VD L+L IGPKFE + +FP R NT
Sbjct: 150 NEIYYGTCVSMGNPHVVVYCED------VDLLSLESIGPKFEFNPLFPERINT 196
>C6PE47_CLOTS (tr|C6PE47) Diaminopimelate epimerase OS=Thermoanaerobacterium
thermosaccharolyticum DSM 571 GN=dapF PE=3 SV=1
Length = 277
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 15/176 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A KLCDR+FGIGADG++ P + D MRI NSDGSE EMCGNG RCFA+++ E +
Sbjct: 30 ARKLCDRHFGIGADGLLIVEP-SGIADIKMRIINSDGSEAEMCGNGARCFAKYVYE-NGI 87
Query: 76 QGKQSFTIHTGAGLIVPEI--QED--GKVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K ++ T +G+I+PE+ ++D KVKV MG PI + +P + + ++ +
Sbjct: 88 VKKDKMSVETLSGIIMPELIFKDDVVEKVKVHMGSPIFRTDMIPVK---TDKKSFIEETI 144
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+DG T+ VT + +G PH + F +K+++++ IGP E +FP TN
Sbjct: 145 KIDGRTYIVTSLLVGVPHTIIFVNSIDKNMILN------IGPLIEKLQIFPRGTNV 194
>C7P6F3_METFA (tr|C7P6F3) Diaminopimelate epimerase OS=Methanocaldococcus fervens
(strain DSM 4213 / JCM 157852 / AG86) GN=dapF PE=3 SV=1
Length = 297
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 11/181 (6%)
Query: 16 AVKLCDRNFGIGADGVIFAM-PGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELEN 74
A K+C R F +GADGVIF P ++ D RIFNSDGSE EMCGNG+RCF++++ E
Sbjct: 35 AKKICRRGFSVGADGVIFVQKPTSDEYDVRFRIFNSDGSEAEMCGNGIRCFSKYV--YER 92
Query: 75 LQGKQSFTIHTGAGLIVPEIQEDG----KVKVDMGEPILKASDVPTRLPA-NKDDAVVKS 129
+ K + T GL V E++ +G K+KV MG P K D+P + ++DD +
Sbjct: 93 IMKKNPLNVETKGGLRVSEMEIEGDEVKKIKVYMGVPKFKLKDIPMVVDGYSEDDEFLNG 152
Query: 130 ELNVDGETW---NVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
EL + ++ V++GNPH V F DL +L IG + EHH FP R N
Sbjct: 153 ELELKNPYLPKVKLSVVNVGNPHAVIFVEDNGIDLDFVRKHLDVIGKEIEHHKAFPERIN 212
Query: 187 T 187
Sbjct: 213 V 213
>D1N121_9BACT (tr|D1N121) Diaminopimelate epimerase OS=Victivallis vadensis ATCC
BAA-548 GN=Vvad_PD2972 PE=3 SV=1
Length = 276
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 98/173 (56%), Gaps = 10/173 (5%)
Query: 15 QAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELEN 74
A LCDR+FGIGADGV+ P G+ + MRI+NSDG+E EMCGN RC +I +
Sbjct: 29 SAEHLCDRHFGIGADGVVTVRP-LGGSAFEMRIYNSDGTETEMCGNATRCVGLYIRK-NK 86
Query: 75 LQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVD 134
L F +HT G++ P++ ++G V+VDMGEP L ++P + + + +
Sbjct: 87 LAAGSEFELHTRGGIVRPKVLDNGSVRVDMGEPHLLRGEIP--VAGDPASGAENLAIELP 144
Query: 135 GETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
G ++ VSMGNPH V F ++ + L + GP+ E HA+FP +TN
Sbjct: 145 GRQFSAVGVSMGNPHAVIFVPD------INAVELEKWGPQVECHALFPNKTNV 191
>C4KD15_THASP (tr|C4KD15) Diaminopimelate epimerase OS=Thauera sp. (strain MZ1T)
GN=dapF PE=3 SV=1
Length = 277
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 12/178 (6%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+TP + + DR+FG+G D ++ P D+ RIFN+DG E E CGNG RCF RF+
Sbjct: 27 LTPARVKAIADRHFGVGCDQLLVVEPAARPDVDFRYRIFNADGGEVEQCGNGARCFVRFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ + L K + T +G+I P ++ DG V VDMG P L P ++P D V
Sbjct: 87 HD-KGLTDKAEIRVETRSGIIAPRLRADGLVTVDMGVPELA----PAKVPFVSDSDAVVQ 141
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
L V G+T +T VSMGNPH V VD + E G + E H FPAR N
Sbjct: 142 PLQVGGDTVAITAVSMGNPHAVQVVAD------VDAAPVVEQGARIERHERFPARVNA 193
>D6JSY3_ACIG3 (tr|D6JSY3) Diaminopimelate epimerase OS=Acinetobacter sp. SH024
GN=dapF PE=3 SV=1
Length = 281
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S + E +L DR+FGIG D ++ P D+ RIFN+DGSE E CGNGVRC
Sbjct: 22 SQRAYLDTETIQRLADRHFGIGFDQLLIVEPPDLPEADFKYRIFNADGSEVEQCGNGVRC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ E +L K S T+ T AG++ PE+ ++G V+V+MG P +++P A + +
Sbjct: 82 FARFVHE-RHLTTKTSITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIP--FIAEQPE 138
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
A+ EL D + N+ V+MGNPH VT D+L ++A IGP+ E H FP R
Sbjct: 139 ALYTLELAND-QNINIDVVNMGNPHAVTI----VPDVL--TADVAGIGPQVESHKRFPER 191
Query: 185 TNT 187
N
Sbjct: 192 VNA 194
>A4XJ32_CALS8 (tr|A4XJ32) Diaminopimelate epimerase OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=dapF
PE=3 SV=1
Length = 278
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 103/177 (58%), Gaps = 15/177 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
A ++C R+ G+GADG++ + ++ D MRI NSDGSE EMCGNG+RCFA+++ E +
Sbjct: 30 AKRMCHRHIGVGADGLLLVL-NSDIADIRMRIINSDGSEAEMCGNGIRCFAKYVYE-RGI 87
Query: 76 QGKQSFTIHTGAGLIVPE--IQEDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
F + T AG+I PE + E G KVKV+MG+P K D+P + + + + +
Sbjct: 88 VKATKFKVETLAGIIEPELFVNEYGLVDKVKVNMGKPSFKRKDIP--MQGDPESDAINTS 145
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ VDG + +T + MG PH + F V+ +++ +GPK E H FP +TN
Sbjct: 146 IVVDGNEYRITSLLMGVPHTILFVDD------VEKVDIYTLGPKIEKHEAFPRKTNV 196
>D4LQR2_9FIRM (tr|D4LQR2) Diaminopimelate epimerase OS=Ruminococcus obeum A2-162
GN=CK5_17160 PE=3 SV=1
Length = 285
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 108/174 (62%), Gaps = 16/174 (9%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
+ DR+FGIG+DG+I P ++ D M ++N DGS+ MCGNG+RC A++ + + K
Sbjct: 33 VSDRHFGIGSDGLILIKP-SDIADCEMDMYNLDGSQGAMCGNGIRCVAKYAYDY-GIVNK 90
Query: 79 QSFTIHTGAGLIVPEIQ--EDGKV---KVDMGEPILKASDVPTRLPANKDDAVVKSELNV 133
S ++ T +G+ ++ +DGKV KV+MG PIL + +P + + V+ L+V
Sbjct: 91 TSISVATKSGIKYLDLTLGKDGKVALVKVNMGAPILTSRQIPV---VSTKEQVINEPLHV 147
Query: 134 DGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
DGET+++T VSMGNPH + + D L NL++ ++GPKFE+H FP R NT
Sbjct: 148 DGETYHITAVSMGNPHAIVY-----MDAL-KNLDIEKLGPKFENHINFPDRINT 195
>C0DT95_EIKCO (tr|C0DT95) Diaminopimelate epimerase OS=Eikenella corrodens ATCC
23834 GN=dapF PE=3 SV=1
Length = 282
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 102/175 (58%), Gaps = 16/175 (9%)
Query: 18 KLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+ DR+ GIG D ++ +P ++ RIFN+DGSE E CGNG RCFARF+ E + L
Sbjct: 35 EWADRHRGIGFDQLLLVEVPPLPEAEFGYRIFNADGSEVEQCGNGARCFARFVHE-KGLS 93
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP-TRLPANKDDAVVKSELNVDG 135
+ + T GLIV +QE+G V VDMGEP L A+D+P + P DA + E+ +DG
Sbjct: 94 RNRRIRVATAKGLIVLNLQENGLVTVDMGEPRLAAADIPFSPAPGEAADA-LWHEIGLDG 152
Query: 136 ETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFEHHAVFPARTNT 187
+ +CV+MGNPH V L+VD+++ +AE G + E H FP R N
Sbjct: 153 ASARFSCVNMGNPHAV---------LVVDDVHCAPVAEWGARLERHPQFPERVNV 198
>B9TEQ5_RICCO (tr|B9TEQ5) Diaminopimelate epimerase, putative OS=Ricinus communis
GN=RCOM_1949010 PE=3 SV=1
Length = 271
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 20/188 (10%)
Query: 4 RDSTEPRVTPEQAVKLCDRNFGIGADGVIFAMPGTNG-TDYSMRIFNSDGSEPEMCGNGV 62
R S E +T +L DR+FGIG D ++ D+ RIFN+DGSE E CGNG
Sbjct: 15 RQSIE--LTESAVRQLADRHFGIGCDQLLLVEKSDRSDIDFRYRIFNADGSEVEQCGNGA 72
Query: 63 RCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANK 122
RCF RF+ + + L K + T G+I+P ++ +G V VDMG P+ P+ +P +
Sbjct: 73 RCFVRFVHD-QGLTDKHEIRVETAKGIIMPRLEANGLVTVDMGAPVFD----PSEIPFDS 127
Query: 123 DDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHA 179
D + L++DG ++ +SMGNPH V +V+N+ A + GP EHH
Sbjct: 128 DQPALTYPLDLDGNVVEISAISMGNPHAVQ---------VVENIETAPVETQGPLIEHHQ 178
Query: 180 VFPARTNT 187
FP R N
Sbjct: 179 RFPNRVNA 186
>A7JUW9_PASHA (tr|A7JUW9) Diaminopimelate epimerase OS=Mannheimia haemolytica
PHL213 GN=dapF PE=3 SV=1
Length = 274
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T E L DR+ GIG D ++ P + D+ RIFN+DGSE CGNG RCFARF+
Sbjct: 25 LTEEMIRTLSDRHRGIGFDQLLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFV 84
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L+ L K+ + T G +V +QEDGKV+V+MGEPI + S VP + + ++++
Sbjct: 85 T-LKGLTNKKDIHVSTAKGKMVLSLQEDGKVRVNMGEPIWEPSQVPFTANKFEKNYILRT 143
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPARTN 186
EL +T VSMGNPHCV L VD++ A E+GP E H FP R N
Sbjct: 144 EL----QTVLCGVVSMGNPHCV---------LQVDDVKTAPVNELGPLLESHERFPERAN 190
>A5Z6H7_9FIRM (tr|A5Z6H7) Diaminopimelate epimerase OS=Eubacterium ventriosum
ATCC 27560 GN=dapF PE=3 SV=1
Length = 277
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 110/173 (63%), Gaps = 15/173 (8%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
+ +R+FGIG+DG+I P ++ D+ M ++N+DGSE +MCGNG+RC A+++ + + K
Sbjct: 33 VSNRHFGIGSDGLIVINP-SDVADFKMSMYNADGSEGKMCGNGIRCVAKYVYD-NKMTDK 90
Query: 79 QSFTIHTGAGL--IVPEIQED--GKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVD 134
+ T+ T +G+ +V +++D V+V+MG PIL+++ VP ++ D V+ + V+
Sbjct: 91 TTITVETLSGIKTLVLNVEDDKVKTVRVNMGSPILESAKVPV---VSEKDKVIDEPVMVN 147
Query: 135 GETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ + +TCVSMGNPH +TF +D+L++ IGP FE +FP + NT
Sbjct: 148 NKEYRITCVSMGNPHAITFVDD------IDSLDIEHIGPMFEKKEIFPEQVNT 194
>A5ZMM8_9FIRM (tr|A5ZMM8) Putative uncharacterized protein OS=Ruminococcus obeum
ATCC 29174 GN=RUMOBE_00245 PE=3 SV=1
Length = 280
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 107/174 (61%), Gaps = 16/174 (9%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
+ DR+FGIG+DG+I P ++ D M ++N DGS+ MCGNG+RC A++ + + K
Sbjct: 33 VSDRHFGIGSDGLILIKP-SDVADCEMDMYNLDGSQGAMCGNGIRCVAKYAYDY-GIVNK 90
Query: 79 QSFTIHTGAGLIVPEIQ--EDGKV---KVDMGEPILKASDVPTRLPANKDDAVVKSELNV 133
+ ++ T +G+ ++ +DGKV KV+MG PIL + +P + + V+ LNV
Sbjct: 91 TNISVATKSGIKYLDLTLGDDGKVALVKVNMGAPILTSRQIPV---VSTKEQVIDEPLNV 147
Query: 134 DGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
DG T+++T VSMGNPH + + DL NL++ +IGPKFE+H FP R NT
Sbjct: 148 DGTTYHITAVSMGNPHAIVY----MDDL--RNLDIEKIGPKFENHIAFPDRINT 195
>B6WRE7_9DELT (tr|B6WRE7) Diaminopimelate epimerase OS=Desulfovibrio piger ATCC
29098 GN=dapF PE=3 SV=1
Length = 306
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 16/184 (8%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGT--NGTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
P A + DR++G+G+DG++ +P T + D MR+FN+DGSE EMCGN RC RF
Sbjct: 41 PVLARAVSDRHYGVGSDGLVLILPPTSPDSADLRMRMFNADGSEAEMCGNASRCVGRFAW 100
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDG-----KVKVDMGEPILKASDVPT--RLPANKD 123
E L + + T AG+ + + +D +V VDMG P L +P ++ +
Sbjct: 101 E-HALTDRPVIRLETLAGIKLLQRVDDAGGCPSRVCVDMGTPELARQRIPVCPDTASDPE 159
Query: 124 DAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPA 183
+ + V W +TCVSMGNPH V F VD+L+L +GP FEHH FP+
Sbjct: 160 SPCIGQPIRVLDREWTMTCVSMGNPHAVVFVDD------VDSLDLPVVGPAFEHHPWFPS 213
Query: 184 RTNT 187
RTNT
Sbjct: 214 RTNT 217
>B5CS56_9FIRM (tr|B5CS56) Diaminopimelate epimerase OS=Ruminococcus lactaris ATCC
29176 GN=dapF PE=3 SV=1
Length = 281
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 104/176 (59%), Gaps = 15/176 (8%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
AV++ DR+FG+G+DG+I P + D M ++N+DGS EMCGNG+RC +++ + L
Sbjct: 34 AVRISDRHFGVGSDGLILINP-SKVADCEMEMYNADGSRGEMCGNGIRCVGKYMYDY-GL 91
Query: 76 QGKQSFTIHTGAGL-IVPEIQEDG---KVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K++ ++ T AG+ + E+G KVKVDMG PIL +++P + + V +
Sbjct: 92 TDKEAISVETLAGIKYLQFFIENGKVAKVKVDMGSPILTPAEIPV---VAEGERAVDEPI 148
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
VDG + +TC+SMGNPH + + V NL + +IGP FE H FP R NT
Sbjct: 149 VVDGTEYRMTCISMGNPHAIVYVDD------VKNLPIEKIGPLFEKHERFPNRVNT 198
>C5V604_9PROT (tr|C5V604) Diaminopimelate epimerase OS=Gallionella
capsiferriformans ES-2 GN=dapF PE=3 SV=1
Length = 276
Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 98/181 (54%), Gaps = 18/181 (9%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGTNGT-DYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T EQ L DR+FG+G D ++ + + D+ RIFN+DG E E CGNG RCF RF+
Sbjct: 27 LTTEQLRLLADRHFGVGCDQILLVEKAHDASADFRYRIFNADGGEVEQCGNGARCFVRFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ + L K + T GLI P ++ DG+V V+MG P+ A+ R+P + V
Sbjct: 87 HD-QKLTNKAEIVVETHNGLIRPRLEADGRVVVNMGAPVFDAA----RIPFSGGTIEVMQ 141
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
L V +T V+ VSMGNPH V +VD++ A + GP EHHA FP R N
Sbjct: 142 PLVVADQTLMVSIVSMGNPHAVQ---------VVDDVERAAVEVLGPLIEHHASFPKRVN 192
Query: 187 T 187
Sbjct: 193 A 193
>B1TAX6_9BURK (tr|B1TAX6) Diaminopimelate epimerase OS=Burkholderia ambifaria
MEX-5 GN=BamMEX5DRAFT_4942 PE=3 SV=1
Length = 282
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 11 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 70
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ + VP T
Sbjct: 71 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFDAT 129
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + L+V G T ++ VSMGNPH V +VD++ + E GP
Sbjct: 130 GLDGRTEGRDTLWPLDVGGATRWISAVSMGNPHAVQ---------VVDDVEAYPVLEEGP 180
Query: 174 KFEHHAVFPARTNT 187
EHHA FP R N
Sbjct: 181 LIEHHARFPQRVNA 194
>D4JYF3_9FIRM (tr|D4JYF3) Diaminopimelate epimerase OS=Faecalibacterium
prausnitzii L2-6 GN=dapF PE=3 SV=1
Length = 279
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 106/193 (54%), Gaps = 21/193 (10%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVI-FAMPGTNGTDYSMRIFNSDGSEPEMCG 59
+D R+S P + L R+F IGADG+I P T G D MRIFN+DGSE +MCG
Sbjct: 18 LDCRESGVPENIAALSQDLSRRHFSIGADGIICICAPVTAGADGRMRIFNADGSEAQMCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPE-IQEDGK--VKVDMGEPILKASDVPT 116
NGVRC A ++ + K++ + TG+G P+ I G+ +V+MG S +
Sbjct: 78 NGVRCVAEWL--YTHGTAKETLVVDTGSG---PKTITRKGRQLWQVEMG----GYSAMAA 128
Query: 117 RLPA--NKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPK 174
LPA + +V L V+G TW V C+S+GNPHCVT VD+L L +IGP
Sbjct: 129 ALPAVNMGEGPLVDCPLTVEGRTWRVACISVGNPHCVTVVDD------VDSLKLEDIGPA 182
Query: 175 FEHHAVFPARTNT 187
FE H FP R NT
Sbjct: 183 FEKHPNFPERINT 195
>C7RPB8_ACCPU (tr|C7RPB8) Diaminopimelate epimerase OS=Accumulibacter phosphatis
(strain UW-1) GN=dapF PE=3 SV=1
Length = 276
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 97/181 (53%), Gaps = 18/181 (9%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T Q L DR+FGIG D ++ P + G D+ RIFN+DG E E CGNG RCF RF+
Sbjct: 27 LTAPQLRHLADRHFGIGCDQILLVEPASQPGIDFRYRIFNADGGEVEQCGNGARCFVRFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
E + L K+ + T G+I P +++DG V VDMG P+ ++ +P A +D V
Sbjct: 87 HE-QGLTAKREIRVETMGGVIGPRLEDDGTVTVDMGVPVFASAQIP--FVAATEDLV--Q 141
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
L V E +T V MGNPH V +V +++LA + GP E H FP R N
Sbjct: 142 TLRVADEDIAITAVGMGNPHAVQ---------VVADVDLAPVERQGPLIEAHPRFPQRVN 192
Query: 187 T 187
Sbjct: 193 A 193
>D4LKA8_9FIRM (tr|D4LKA8) Diaminopimelate epimerase OS=Ruminococcus sp. SR1/5
GN=dapF PE=3 SV=1
Length = 284
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 106/173 (61%), Gaps = 15/173 (8%)
Query: 19 LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGK 78
+ DR+FGIG+DG+I P + D M ++N DGS+ MCGNG+RC A+++ + + K
Sbjct: 33 VSDRHFGIGSDGLILIRP-SEIADCEMDMYNLDGSQGAMCGNGIRCVAKYVYD-HGIVDK 90
Query: 79 QSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKSELNVD 134
S +I T +G+ ++ DGK VKV+MG PIL A ++P + + V+ + + VD
Sbjct: 91 TSLSIATRSGIKYVDLTIRDGKASMVKVNMGSPILTAKEIPV---VAETEQVIDAPITVD 147
Query: 135 GETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
G+ +++T VSMGNPH + + V++L+L +IGP FE+H FP R NT
Sbjct: 148 GKEYHMTAVSMGNPHAIIYVDD------VNSLDLEKIGPSFENHVCFPDRVNT 194
>B0NK22_EUBSP (tr|B0NK22) Putative uncharacterized protein OS=Clostridium
scindens ATCC 35704 GN=CLOSCI_03863 PE=3 SV=1
Length = 277
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 107/179 (59%), Gaps = 17/179 (9%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A + DR+FGIG+DG+I P + D+ M ++N+DGS EMCGNG+RC A+++ +
Sbjct: 28 EVARFVSDRHFGIGSDGLIMINP-SKVADFEMEMYNADGSRGEMCGNGIRCVAKYVYDY- 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDA-VVK 128
L K S ++ T G+ ++ +DGK VKVDMG+P LK P R+P D+ VV
Sbjct: 86 GLTDKTSISVETLGGIKYLDLTVKDGKVALVKVDMGKPELK----PERIPIVSDEERVVN 141
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ V G + +T VSMGNPH V + KDL + + + +GPKFE+H FP R NT
Sbjct: 142 EPIIVGGMEYRMTGVSMGNPHVVVY----VKDL--EGVKIEHVGPKFENHERFPKRVNT 194
>B8DZX7_DICTD (tr|B8DZX7) Diaminopimelate epimerase OS=Dictyoglomus turgidum
(strain Z-1310 / DSM 6724) GN=Dtur_0778 PE=3 SV=1
Length = 285
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 105/183 (57%), Gaps = 23/183 (12%)
Query: 14 EQAVKL-CDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
E+ V+L CDRN+GIG+DG I + N ++ +RIFN DGSE E GNG+R A++I +
Sbjct: 27 EKNVRLICDRNYGIGSDG-ILILEKINNQEFKVRIFNPDGSEAEKSGNGIRILAKYIYDY 85
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQEDGK-----VKVDMGEPILKASDVPTRLPANKDDAVV 127
K+ F I+T G + I E+ K ++V+MG+ K+S++P + ++
Sbjct: 86 RYTTEKE-FYIYTLGGKVKVSIVEEQKGRAKSIEVEMGKITFKSSEIPV---LGSEREII 141
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFEHHAVFPAR 184
EL ++ ET VTC+S+GNPHCV F VD +N + +GPK E+H +FP R
Sbjct: 142 DEELKINDETIKVTCLSIGNPHCVFF---------VDEINEEKIKSLGPKIENHPMFPNR 192
Query: 185 TNT 187
N
Sbjct: 193 INV 195
>C9RGT5_METVM (tr|C9RGT5) Diaminopimelate epimerase OS=Methanocaldococcus
vulcanius (strain ATCC 700851 / DSM 12094 / M7) GN=dapF
PE=3 SV=1
Length = 295
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 18 KLCDRNFGIGADGVIFAM-PGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
K+C R F +GADGVIF P ++ D RIFNSDGSE EMCGNG+RCF++++ E +
Sbjct: 35 KICRRGFSVGADGVIFIQKPTSDNFDVRFRIFNSDGSEAEMCGNGIRCFSKYV--YERVM 92
Query: 77 GKQSFTIHTGAGLIVPEIQ-EDG---KVKVDMGEPILKASDVPTRLPA-NKDDAVVKSEL 131
K + T GL + E++ E+G K+KV MG P K D+P L + ++ + EL
Sbjct: 93 KKNPLRVETKGGLRISEMEVENGEVKKIKVYMGVPKFKLKDIPMILEGKDNEEEFLNGEL 152
Query: 132 NVDGETW---NVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
N++ ++ V++GNPH V F N DL NL IG E+H FP R N
Sbjct: 153 NLNNPILPKVRLSVVNVGNPHAVIFVEDNNIDLDFVRKNLDIIGRDIENHKAFPERINV 211
>C0ZH35_BREBN (tr|C0ZH35) Diaminopimelate epimerase OS=Brevibacillus brevis
(strain 47 / JCM 6285 / NBRC 100599) GN=dapF PE=3 SV=1
Length = 286
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 105/180 (58%), Gaps = 17/180 (9%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE A ++ DRNFGIG DG+I MP + D+ MR+FN+DGSE + CGNG+RC ++++ +
Sbjct: 29 PELARRVSDRNFGIGGDGLILIMP-SERADFRMRVFNNDGSEAKNCGNGLRCVSKYVYD- 86
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ--EDGK---VKVDMGEPILKASDVP-TRLPANKDDAV 126
L + +FT+ T G + P + DG+ V +DMGEP + + +P T +P ++ V
Sbjct: 87 HGLTEQTTFTVETLGGTVTPVVSLGADGRVDQVTIDMGEPRFERAAIPMTGIP---EEQV 143
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ + V G + +T VSMGNPH + F + V ++ GP E+H FP RTN
Sbjct: 144 REEGIEVGGTAFTMTAVSMGNPHAILFVDE------VKEEDVRHYGPMIEYHEWFPERTN 197
>C0N8U7_9GAMM (tr|C0N8U7) Diaminopimelate epimerase OS=Methylophaga thiooxidans
DMS010 GN=dapF PE=3 SV=1
Length = 281
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 98/181 (54%), Gaps = 20/181 (11%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T Q L DR FG+G D ++ P T D+ RIFN+DG E CGNG RCFARF+
Sbjct: 26 LTSAQIQFLSDRRFGVGCDQLLLVEKPQTAEADFRYRIFNADGGEVAQCGNGARCFARFV 85
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ + L K + + T +GLI P +Q DG V VDMG+PI + P ++P ++A
Sbjct: 86 RD-KGLTTKDTIAVETASGLIYPTLQADGSVTVDMGKPIFE----PAKIPFQAEEATTYM 140
Query: 130 ELNVDGE-TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPART 185
L +D + +SMGNPH V +LVD++ +A E+GP E H FP R
Sbjct: 141 -LTIDEHGKKEIAALSMGNPHAV---------MLVDDVTVASVLELGPLIESHERFPERV 190
Query: 186 N 186
N
Sbjct: 191 N 191
>A6T2Z4_JANMA (tr|A6T2Z4) Diaminopimelate epimerase OS=Janthinobacterium sp.
(strain Marseille) (Minibacterium massiliensis) GN=dapF
PE=3 SV=1
Length = 276
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
TP Q L DR FG+GAD ++ P G D+ RI+N+DG E E CGNG R F RF+
Sbjct: 21 TPAQWQYLADRRFGVGADQMLVVEKPQAAGVDFRYRIYNADGGEVEQCGNGARAFVRFVT 80
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
+ + L K++ + T +G+I P ++ +G++ VDMG PIL DVP + D + K+E
Sbjct: 81 D-KKLTDKRAIKVETMSGIIEPRLEANGQITVDMGAPILNPEDVPF----DTRDLLCKAE 135
Query: 131 -------LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPA 183
L++ GET ++ VSMGNPH V V+ + E G EHH FP
Sbjct: 136 GEDTLWPLDIKGETNWISVVSMGNPHAVQVVAD------VEEAPVREDGVLIEHHPRFPK 189
Query: 184 RTNT 187
R N
Sbjct: 190 RVNA 193
>D0S155_ACICA (tr|D0S155) Diaminopimelate epimerase OS=Acinetobacter
calcoaceticus RUH2202 GN=dapF PE=3 SV=1
Length = 281
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S + E +L DR+FGIG D ++ P D+ RIFN+DGSE E CGNGVRC
Sbjct: 22 SQRAYLDTETIQRLADRHFGIGFDQLLIVEPPDLPEADFKYRIFNADGSEVEQCGNGVRC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ E +L K + T+ T AG++ PE+ ++G V+V+MG P +++P A + +
Sbjct: 82 FARFVHE-RHLTSKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIP--FVAEQPE 138
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
A+ EL D + ++ V+MGNPH VT D+L ++A IGP+ E H FP R
Sbjct: 139 ALYTLELAND-QNISIDVVNMGNPHAVTI----VPDVL--TADVAGIGPQVESHKRFPER 191
Query: 185 TNT 187
N
Sbjct: 192 VNA 194
>D0SK96_ACIJU (tr|D0SK96) Diaminopimelate epimerase OS=Acinetobacter junii SH205
GN=dapF PE=3 SV=1
Length = 284
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Query: 18 KLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DR+FG+G D ++ P D+ RIFN+DGSE E CGNGVRCFARF+ E L
Sbjct: 34 RLADRHFGVGFDQLLIVEPPDFPDADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RQLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K + T AG++ PE+ +G V+V+MG P +++P ++D + D +
Sbjct: 93 TKTKIRVQTKAGIVEPELGANGWVRVNMGPPKFLPAEIPFLTDEHEDTEGLYKLGLADNK 152
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ N+ V+MGNPH VT D+L ++A IGP+ E HA FPAR N
Sbjct: 153 SINIDVVNMGNPHAVTI----VPDVL--TADVAGIGPQVESHARFPARVNA 197
>D1T0B5_9BURK (tr|D1T0B5) Diaminopimelate epimerase OS=Acidovorax avenae subsp.
avenae ATCC 19860 GN=dapF PE=3 SV=1
Length = 297
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 102/203 (50%), Gaps = 34/203 (16%)
Query: 5 DSTEPRV--TPEQAVKLCDRNFGIGADGVIFAMPG-TNGTDYSMRIFNSDGSEPEMCGNG 61
D T+ R+ TP Q L DR+FG+GAD ++ P +G D+ I N+DG E E CGNG
Sbjct: 19 DETQGRLGLTPAQYRYLADRHFGVGADQILTVRPSPADGIDFEYVIHNADGGEVEQCGNG 78
Query: 62 VRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPAN 121
RCFAR++ + + L + + + T AG+I P + EDG+V VDMG P ++VP
Sbjct: 79 ARCFARYVRD-KGLTDRDTIRVQTLAGVIAPRLTEDGRVTVDMGRPRFDPAEVPF----- 132
Query: 122 KDDAVVKSELNVDGETW------------------NVTCVSMGNPHCVTFGTKENKDLLV 163
D + ++S + G+TW +V VSMGNPH V V
Sbjct: 133 -DASGLESTVRGAGQTWPLDLGAGAGAGAQEGDVVDVAVVSMGNPHAVQLVED------V 185
Query: 164 DNLNLAEIGPKFEHHAVFPARTN 186
D +A GP E H FP R N
Sbjct: 186 DTAPVARTGPLIERHVRFPQRVN 208
>A6NZA1_9BACE (tr|A6NZA1) Diaminopimelate epimerase OS=Bacteroides capillosus
ATCC 29799 GN=dapF PE=3 SV=1
Length = 280
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 96/183 (52%), Gaps = 27/183 (14%)
Query: 9 PRVTPEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
P PE AV+L DR+FG+GADG+I P + D+ MRIFN+DGSE MCGNG+RC ++
Sbjct: 23 PDNLPELAVRLSDRHFGVGADGLICICP-SERADFGMRIFNADGSEGAMCGNGIRCLGKY 81
Query: 69 IAELENLQGKQSFTIHTGAGLIVPEI-QEDGKVK---VDMGEPILKASDVPTRLPANKDD 124
+ + + T+ T +G+ E+ DG V+ VDMG P L P +L A
Sbjct: 82 VYDKGLTRKTSLLTVETASGVRYLELFLRDGLVQSVLVDMGRPELSP---PVKLMAA--- 135
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
G TW VS+GNPH V F VD LNLAE+GP E H FP R
Sbjct: 136 ----------GRTWQAVPVSVGNPHAVVFCGG------VDALNLAELGPALERHPAFPDR 179
Query: 185 TNT 187
N
Sbjct: 180 VNV 182
>D6VHS1_9BURK (tr|D6VHS1) Diaminopimelate epimerase OS=Alicycliphilus
denitrificans BC GN=AlideDRAFT_2330 PE=4 SV=1
Length = 292
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 101/197 (51%), Gaps = 25/197 (12%)
Query: 5 DSTEPRV--TPEQAVKLCDRNFGIGADGVIFAMPG-TNGTDYSMRIFNSDGSEPEMCGNG 61
D T R+ TP Q L DR+FG+GAD ++ P G D+ I N+DG + + CGNG
Sbjct: 19 DETRERLGLTPAQYRFLADRHFGVGADQILTVRPSPAEGIDFEYLIHNADGGQVQQCGNG 78
Query: 62 VRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPAN 121
RCFAR++ + + L K + T AG+I PE+ DG+V VDMG P+L P RLP +
Sbjct: 79 ARCFARYVRD-KGLTAKDRIRVQTMAGVIAPELTADGRVTVDMGRPVLD----PARLPFD 133
Query: 122 K-------DDAVVKSELNVDGE----TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAE 170
+V K L +DG+ T + VSMGNPH V VD+ +A
Sbjct: 134 TAGLVPVPQGSVKKWPLALDGKAPQATVMIVAVSMGNPHAVQLVDD------VDSAPVAR 187
Query: 171 IGPKFEHHAVFPARTNT 187
GP E H FP R N
Sbjct: 188 TGPLIEGHPRFPQRVNA 204
>D5U513_BRAM5 (tr|D5U513) Diaminopimelate epimerase OS=Brachyspira murdochii
(strain ATCC 51284 / DSM 12563 / 56-150) GN=dapF PE=3
SV=1
Length = 279
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 19/191 (9%)
Query: 5 DSTEPRVTPEQAVK----LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGN 60
D + + T E A+K L R++ IGADG+I MP ++ D MR+FN DGSE EMCGN
Sbjct: 19 DCFKEKFTVEDAMKYSPILSHRHYSIGADGIILIMP-SDKADVQMRMFNYDGSESEMCGN 77
Query: 61 GVRCFARFIAELENLQGKQSFTIHTGAGLIVPEI----QEDGKVKVDMGEPILKASDVPT 116
G+RC A++ A + + I T G++ ++ E V+++M PIL+ +PT
Sbjct: 78 GIRCVAKY-AYDKGISKNNPMKIETLRGILDAKLFIKDNEADSVEINMDSPILEGLKIPT 136
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFE 176
+ N ++ + +G+T+ TCVSMGNPH V F V N+++A+IG E
Sbjct: 137 TIDKN---VIIDEPITFNGKTYYFTCVSMGNPHTVIFVDD------VSNMDIADIGNYIE 187
Query: 177 HHAVFPARTNT 187
++ +FP RTN
Sbjct: 188 NNTIFPNRTNV 198
>B6C3A3_9GAMM (tr|B6C3A3) Diaminopimelate epimerase OS=Nitrosococcus oceani AFC27
GN=dapF PE=3 SV=1
Length = 276
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGT-NGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T Q + +R GIG D V+ P + D+ RIFN+DG E E CGNG RCFARF+
Sbjct: 27 LTASQVRWIANRRLGIGCDQVLLVTPASLPAIDFGYRIFNADGGEVEQCGNGARCFARFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
E + L K + T +G+I +++ DG++ VDMG P P ++P D
Sbjct: 87 RE-QGLTDKNVLRVQTASGIIELQLETDGQITVDMGVPRF----APHQIPFKVDQEADYY 141
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
L +DG+ + VSMGNPHCV + VD +A GP E H FP R N
Sbjct: 142 SLELDGQQVEIGAVSMGNPHCVL------RVPAVDTAPVAHWGPLLESHPRFPQRVNV 193
>D0BWM7_9GAMM (tr|D0BWM7) Diaminopimelate epimerase OS=Acinetobacter sp. RUH2624
GN=dapF PE=3 SV=1
Length = 281
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 18 KLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DR+FG+G D ++ P D+ RIFN+DGSE E CGNGVRCFARF+ E +L
Sbjct: 34 RLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K + T+ T AG++ PE+ ++G V+V+MG P +++P A + +A+ EL D +
Sbjct: 93 NKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIP--FVAEEPEALYTLELAND-Q 149
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++ V+MGNPH VT D+L ++A IGP+ E H FP R N
Sbjct: 150 NISIDVVNMGNPHAVTI----VPDVL--TADVAGIGPQVESHKRFPERVNA 194
>Q1BSN5_BURCA (tr|Q1BSN5) Diaminopimelate epimerase OS=Burkholderia cenocepacia
(strain AU 1054) GN=Bcen_2471 PE=3 SV=1
Length = 309
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 38 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 97
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L ++S + GLI +QE+G+V VDMG P+ + VP
Sbjct: 98 NGARCFVKFVSD-RGLTDQRSVRVQVMKGLITLTLQENGEVVVDMGAPVFAPAQVPFDAA 156
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + K+ L+V G T ++ VSMGNPH V +VD++ + E GP
Sbjct: 157 GLDSRKEGNDTLWPLDVGGATRWISTVSMGNPHAVQ---------VVDDVEAYPVLEEGP 207
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 208 LIERHARFPQRVNA 221
>A0KBF6_BURCH (tr|A0KBF6) Diaminopimelate epimerase OS=Burkholderia cenocepacia
(strain HI2424) GN=Bcen2424_3085 PE=3 SV=1
Length = 309
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 38 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 97
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L ++S + GLI +QE+G+V VDMG P+ + VP
Sbjct: 98 NGARCFVKFVSD-RGLTDQRSVRVQVMKGLITLTLQENGEVVVDMGAPVFAPAQVPFDAA 156
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + K+ L+V G T ++ VSMGNPH V +VD++ + E GP
Sbjct: 157 GLDSRKEGNDTLWPLDVGGATRWISTVSMGNPHAVQ---------VVDDVEAYPVLEEGP 207
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 208 LIERHARFPQRVNA 221
>Q2NE08_METST (tr|Q2NE08) Diaminopimelate epimerase OS=Methanosphaera stadtmanae
(strain DSM 3091) GN=dapF PE=3 SV=1
Length = 292
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 16/191 (8%)
Query: 5 DSTEPRVTPEQAVK-----LCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCG 59
+ TE V PE+A +C R F +G+DGVIFA ++ +D RIFNSDGSE EMCG
Sbjct: 21 NETETEVIPEEAKNKLSNDICTRRFSVGSDGVIFACK-SDKSDVRFRIFNSDGSEAEMCG 79
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQ-EDGKVK---VDMGEPILKASDVP 115
NG+RC A+++ + ++ KQ+ I T + + ED VK +DMG+ K ++P
Sbjct: 80 NGIRCLAKYVYD-NDIVKKQTMQIETMEDIKEARLTVEDDVVKSIAIDMGKGFFKPEEIP 138
Query: 116 TRLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKF 175
P+ D + E++VDGE ++ VS+GNPH V+F +++L GP+
Sbjct: 139 AIAPSGNTDEFIDEEIDVDGEKIIMSSVSVGNPHAVSFTDINID-----DIDLDYYGPRI 193
Query: 176 EHHAVFPARTN 186
E+H FP + N
Sbjct: 194 ENHKAFPEKVN 204
>D0CBH2_ACIBA (tr|D0CBH2) Diaminopimelate epimerase OS=Acinetobacter baumannii
ATCC 19606 GN=dapF PE=3 SV=1
Length = 281
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 102/171 (59%), Gaps = 11/171 (6%)
Query: 18 KLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DR+FG+G D ++ P D+ RIFN+DGSE E CGNGVRCFARF+ E +L
Sbjct: 34 RLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K + T+ T AG++ PE+ ++G V+V+MG P +++P A + +A+ EL D +
Sbjct: 93 NKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIP--FVAEEPEALYTLELAND-Q 149
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++ V+MGNPH VT D+L ++A IGP+ E H FP R N
Sbjct: 150 NISIDVVNMGNPHAVTI----VPDVL--TADVAGIGPQVESHKRFPERVNA 194
>C0EAG3_9CLOT (tr|C0EAG3) Diaminopimelate epimerase OS=Clostridium methylpentosum
DSM 5476 GN=dapF PE=3 SV=1
Length = 287
Score = 120 bits (302), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 14/176 (7%)
Query: 16 AVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
+V+L DR+FGIG DG++ ++ D MR+FN+DGSE +MCGN +RC +++++ +
Sbjct: 39 SVRLSDRHFGIGGDGIVLICR-SDIADAKMRMFNADGSEGKMCGNAIRCVGKYLSDNGLV 97
Query: 76 QGKQSFTIHTGAGL--IVPEIQEDG--KVKVDMGEPILKASDVPTRLPANKDDAVVKSEL 131
K I T +G+ +V Q G V VDMG + S +P + + VV S +
Sbjct: 98 GDKNELDIETLSGVKHLVLHKQRSGVRSVTVDMGPAQMHPSSLPVLIEGTQ---VVNSPV 154
Query: 132 NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ G ++N+TCVSMGNPHCV V+ L + +IGP+FE+ +FP R NT
Sbjct: 155 KIGGTSYNITCVSMGNPHCVVLCDD------VEGLEIEKIGPQFENSELFPERVNT 204
>A1WC24_ACISJ (tr|A1WC24) Diaminopimelate epimerase OS=Acidovorax sp. (strain
JS42) GN=Ajs_3688 PE=3 SV=1
Length = 315
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 5 DSTEPRV--TPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNG 61
D T+ R+ TP Q L DR+FG+GAD ++ P G D+ I N+DG + E CGNG
Sbjct: 42 DETQGRLGLTPAQYRFLADRHFGVGADQILIVRPSPGAGIDFEYVIHNADGGQVEQCGNG 101
Query: 62 VRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---TRL 118
RCFAR++ + + L + + + T AG+I P + DG+V VDMG P L+ + VP T L
Sbjct: 102 ARCFARYVRD-KGLTAQDTIRVQTMAGVIAPHLTADGRVTVDMGRPELEPARVPFDTTGL 160
Query: 119 PANKDDAVVKSELNVDGE----TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPK 174
+ K L +DG+ T + VSMGNPH V VD +A+ GP
Sbjct: 161 APVSQGSGQKWPLALDGQASAATILIAVVSMGNPHAVQLVDD------VDTAPVAQTGPL 214
Query: 175 FEHHAVFPARTNT 187
E H FP R N
Sbjct: 215 IESHPRFPQRVNA 227
>D3S6T6_METSF (tr|D3S6T6) Diaminopimelate epimerase OS=Methanocaldococcus sp.
(strain FS406-22) GN=dapF PE=3 SV=1
Length = 295
Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 16 AVKLCDRNFGIGADGVIFAM-PGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELEN 74
A K+C R F +GADGVIF P ++ D RIFNSDGSE EMCGNG+RCF++++ E
Sbjct: 33 AKKICRRGFSVGADGVIFIQKPTSDEYDVRFRIFNSDGSEAEMCGNGIRCFSKYV--YER 90
Query: 75 LQGKQSFTIHTGAGLIVPEIQEDG----KVKVDMGEPILKASDVPTRLPANK-DDAVVKS 129
+ K + T GL V E++ +G K+KV MG P K D+P + K DD +
Sbjct: 91 IMKKNPLKVETKGGLRVSEMEIEGDEVKKIKVYMGIPKFKLKDIPMVVDGYKEDDEFLNG 150
Query: 130 ELNVDGETW---NVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
EL + ++ V++GNPH V F DL +L IG + E H FP R N
Sbjct: 151 ELKLKNPYLPKVKLSVVNVGNPHAVIFVEDNGIDLDFVREHLDVIGKEIECHEAFPERIN 210
Query: 187 T 187
Sbjct: 211 V 211
>B1G3K4_9BURK (tr|B1G3K4) Diaminopimelate epimerase OS=Burkholderia graminis
C4D1M GN=BgramDRAFT_3941 PE=3 SV=1
Length = 300
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 17/183 (9%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+TPEQ L DR+FG+GAD ++ P +G D+ RIFN DG E E CGNG RCF +F+
Sbjct: 40 LTPEQVRALADRHFGVGADQLLLVEKPTVDGVDFRYRIFNCDGGEVEHCGNGARCFVKFV 99
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---TRLPANKDDAV 126
+ L ++S + G I +QE+G+V VDMG P+ + VP L ++ A
Sbjct: 100 RD-SGLTDQRSVRVQVQNGTITLTMQENGEVLVDMGSPVFEPERVPFATKGLQGRREGAD 158
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPA 183
L+V+G T ++ VSMGNPH V +VD++ + GP E HA FP
Sbjct: 159 TLWPLDVNGTTRWISVVSMGNPHAVQ---------VVDDVEAFPVLVEGPVIERHARFPQ 209
Query: 184 RTN 186
+ N
Sbjct: 210 KVN 212
>D5VQQ0_METIM (tr|D5VQQ0) Diaminopimelate epimerase OS=Methanocaldococcus
infernus (strain DSM 11812 / JCM 15783 / ME)
GN=Metin_0232 PE=3 SV=1
Length = 282
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 111/194 (57%), Gaps = 15/194 (7%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFAM-PGTNGTDYSMRIFNSDGSEPEMCG 59
++ D + + E + K+C R F IGADGVIF P +N D RIFNSDGSE EMCG
Sbjct: 11 INEFDGEKVKNKEEFSKKVCRRRFSIGADGVIFIQKPSSNNYDVKFRIFNSDGSEAEMCG 70
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQ-EDGKVK---VDMGEPILKASDVP 115
NG+RCF++++ E + K + T AGL V E++ ED +VK V MG+P K D+P
Sbjct: 71 NGIRCFSKYV--YERILKKNPLKVETKAGLRVCELEVEDDRVKKIRVYMGKPSFKCKDIP 128
Query: 116 TRLPANKDDAV-VKSEL-NVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGP 173
+ + K++ + ++EL N + N+T VS+GNPH + F DL +L IG
Sbjct: 129 VK--SEKEEFINERAELKNPYLKEVNITAVSVGNPHAIIFVD----DLEKIREHLDVIGS 182
Query: 174 KFEHHAVFPARTNT 187
+ E+ +FP R N
Sbjct: 183 EIENLPIFPERINV 196
>D3RV79_ALLVD (tr|D3RV79) Diaminopimelate epimerase OS=Allochromatium vinosum
(strain ATCC 17899 / DSM 180 / NBRC 103801 / D) GN=dapF
PE=3 SV=1
Length = 278
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 93/173 (53%), Gaps = 16/173 (9%)
Query: 19 LCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
L DR FGIG D ++ P TD+ RIFN+DGSE E CGNG RCFARF+ + + L
Sbjct: 35 LADRRFGIGCDQILLVEPPRLPETDFHYRIFNADGSEVEQCGNGARCFARFVRD-QGLTD 93
Query: 78 KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGET 137
K + T AG I ++ DG+V+VDMG P + +P + DA L ++ T
Sbjct: 94 KDEIPVGTAAGAIRLYLEPDGQVRVDMGAPAFTPARIPFSVETETADATYP--LEIEDRT 151
Query: 138 WNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFEHHAVFPARTNT 187
+ +SMGNPH V L+VD++ +A +GP EHH FP R N
Sbjct: 152 LTIGALSMGNPHAV---------LIVDDVESAPVATLGPLIEHHPDFPRRVNA 195
>C0CQW1_9FIRM (tr|C0CQW1) Diaminopimelate epimerase OS=Blautia hydrogenotrophica
DSM 10507 GN=dapF PE=3 SV=1
Length = 278
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 103/178 (57%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E A + DR+FG+G+DG+I P + D M ++N DGS+ MCGNG+RC A+++ +
Sbjct: 28 EVAKFVSDRHFGVGSDGLILIKP-SQIADCEMDMYNLDGSQGAMCGNGIRCVAKYVYDY- 85
Query: 74 NLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ K + I T +G+ + E+GK V+V+MG PIL+AS +P + V
Sbjct: 86 GIVPKTTLRIATKSGIKELNLTVENGKVSLVRVNMGSPILEASKIPV---VSDQSQAVNQ 142
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ V+G T+ T VSMGNPH V + VDNL++ +IGP FE H VFP R NT
Sbjct: 143 PIKVNGHTYYFTGVSMGNPHAVVYLDD------VDNLDIEKIGPAFEKHPVFPDRVNT 194
>C6BK76_RALP1 (tr|C6BK76) Diaminopimelate epimerase OS=Ralstonia pickettii
(strain 12D) GN=dapF PE=3 SV=1
Length = 292
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
TPEQ + DR+FG+GAD ++ T D+ RIFN DG E E CGNG RCF +F+
Sbjct: 28 TPEQWAAIADRHFGVGADQLLLVERSTRPDVDFRYRIFNHDGGEVEHCGNGARCFVKFVT 87
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTR---LPANKDDAVV 127
+ L K++ + G+ +Q+DG+V VDMG P+ +A+ +P LP +
Sbjct: 88 D-RGLTDKRTVRVEVMNGIATLTMQDDGQVTVDMGAPVFEAARLPFLPEGLPTRVEGDDT 146
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDN---LNLAEIGPKFEHHAVFPAR 184
+ L ++G T ++ VSMGNPH V +VD+ + E GP E HAVFP R
Sbjct: 147 QHALQINGRTEWLSTVSMGNPHAVQ---------IVDDTEAFPVLEDGPLIESHAVFPRR 197
Query: 185 TN 186
N
Sbjct: 198 VN 199
>B1YPQ6_BURA4 (tr|B1YPQ6) Diaminopimelate epimerase OS=Burkholderia ambifaria
(strain MC40-6) GN=BamMC406_2994 PE=3 SV=1
Length = 282
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 11 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 70
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ + VP +
Sbjct: 71 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFDAS 129
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + L+V G T ++ VSMGNPH V +VD++ + E GP
Sbjct: 130 GLDGRAEGRDTLWPLDVGGATRWISAVSMGNPHAVQ---------VVDDVEAYPVLEEGP 180
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 181 LIERHARFPQRVNA 194
>C0VID7_9GAMM (tr|C0VID7) Diaminopimelate epimerase OS=Acinetobacter sp. ATCC
27244 GN=dapF PE=3 SV=1
Length = 284
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Query: 18 KLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DR+FG+G D ++ P D+ RIFN+DGSE E CGNGVRCFARF+ E L
Sbjct: 34 RLADRHFGVGFDQLLLVEPPDFPDVDFKYRIFNADGSEVEQCGNGVRCFARFVHE-RRLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K + T AG++ PE+ +G V+V+MG P ++P ++D + S D +
Sbjct: 93 TKTKIRVQTKAGIVEPELGANGWVRVNMGPPKFLPDEIPFVTQVDEDIEGLYSLELADDK 152
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ N+ V+MGNPH VT D+L ++A IGP+ E H FP R N
Sbjct: 153 SINIDVVNMGNPHAVTI----VPDVL--TADVAGIGPQVESHVRFPERVNA 197
>Q67SX4_SYMTH (tr|Q67SX4) Diaminopimelate epimerase OS=Symbiobacterium
thermophilum GN=dapF PE=3 SV=1
Length = 272
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 97/181 (53%), Gaps = 29/181 (16%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
P A L DR+FG+GADG+I +P G D+ R+FN+DGSE EMCGNG+RCFAR+ E
Sbjct: 30 PALARALSDRHFGVGADGLIVILPPAEPGYDFRFRMFNADGSEGEMCGNGMRCFARYCYE 89
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQED-----GKVKVDMGEPILKASDVPTRLPANKDDAV 126
L ++ + T AG +VPE+ D V+VD+G P R+ ++
Sbjct: 90 -RGLTARRRMRVQTAAGCVVPEVLVDDAGSFAGVRVDLG---------PPRILGDR---- 135
Query: 127 VKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ +G + VT V G PH V F VD ++LA++GP+ E H FPAR N
Sbjct: 136 ---RIAAEGREYPVTVVDTGVPHIVIFVDD------VDAVDLAKVGPQLERHPDFPARVN 186
Query: 187 T 187
Sbjct: 187 V 187
>Q2BRG0_9GAMM (tr|Q2BRG0) Diaminopimelate epimerase OS=Neptuniibacter
caesariensis GN=dapF PE=3 SV=1
Length = 280
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 97/181 (53%), Gaps = 14/181 (7%)
Query: 10 RVTPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
+VTP+ KL DRNFG+G D ++ P + D+ RIFN DGSE E CGNG RCFA+F
Sbjct: 26 KVTPKLVKKLGDRNFGVGFDQLLIVEPPSEPDIDFRYRIFNQDGSEVENCGNGARCFAKF 85
Query: 69 IAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVK 128
+ + + L GK + T G + +I D +V+V+MG PIL DVP + +
Sbjct: 86 VRD-KRLTGKSEVVVQTANGQMTLKIHPDKRVEVNMGAPILAPVDVPFQADQKATTYAID 144
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVD---NLNLAEIGPKFEHHAVFPART 185
L+ + ++ +SMGNPH V L+VD N + +GP E H FPA+
Sbjct: 145 VPLSQGDQQVELSAISMGNPHGV---------LIVDSTENAPVETLGPALEAHERFPAKA 195
Query: 186 N 186
N
Sbjct: 196 N 196
>B9BGP9_9BURK (tr|B9BGP9) Diaminopimelate epimerase OS=Burkholderia multivorans
CGD1 GN=dapF PE=3 SV=1
Length = 289
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D T P +T Q L R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 18 LDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ VP +
Sbjct: 78 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTMQDNGEVVVDMGAPVFAPEQVPFDAS 136
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + L V G T ++ VSMGNPH V +VD+ + E GP
Sbjct: 137 GLDGRSEGRDTLWPLEVGGRTRWISTVSMGNPHAVQ---------VVDDAEAYPVLEEGP 187
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 188 LIERHARFPQRVNA 201
>B3CVY6_BURM1 (tr|B3CVY6) Diaminopimelate epimerase OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=dapF PE=3 SV=1
Length = 289
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D T P +T Q L R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 18 LDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ VP +
Sbjct: 78 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTMQDNGEVVVDMGAPVFAPEQVPFDAS 136
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + L V G T ++ VSMGNPH V +VD+ + E GP
Sbjct: 137 GLDGRSEGRDTLWPLEVGGRTRWISTVSMGNPHAVQ---------VVDDAEAYPVLEEGP 187
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 188 LIERHARFPQRVNA 201
>A3LIJ5_PSEAE (tr|A3LIJ5) Diaminopimelate epimerase OS=Pseudomonas aeruginosa
2192 GN=dapF PE=3 SV=1
Length = 276
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGV-IFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S V P+ DRN GIG D + I P + D+ RIFN+DGSE E CGNG RC
Sbjct: 22 SQHAHVQPKHVKLWGDRNTGIGFDQLLIVEAPSSPDVDFRYRIFNADGSEVEQCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ + + L K+S + T G+I I+ DG+V VDMG P L P +P +
Sbjct: 82 FARFVQD-KRLTVKKSIRVETKGGIIELNIRPDGQVTVDMGPPRL----APAEIPFQAER 136
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
+ E+ V+G+ + VSMGNPH V EN VD+ + +GP+ E H FP +
Sbjct: 137 EALSYEIEVNGQRVELAAVSMGNPHGVL--RVEN----VDSAPVHSLGPQLEVHPRFPKK 190
Query: 185 TN 186
N
Sbjct: 191 AN 192
>A3L1Y6_PSEAE (tr|A3L1Y6) Diaminopimelate epimerase OS=Pseudomonas aeruginosa
C3719 GN=dapF PE=3 SV=1
Length = 276
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 97/182 (53%), Gaps = 12/182 (6%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGV-IFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S V P+ DRN GIG D + I P + D+ RIFN+DGSE E CGNG RC
Sbjct: 22 SQHAHVQPKHVKLWGDRNTGIGFDQLLIVEAPSSPDVDFRYRIFNADGSEVEQCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FARF+ + + L K+S + T G+I I+ DG+V VDMG P L P +P +
Sbjct: 82 FARFVQD-KRLTVKKSIRVETKGGIIELNIRPDGQVTVDMGPPRL----APAEIPFQAER 136
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
+ E+ V+G+ + VSMGNPH V EN VD+ + +GP+ E H FP +
Sbjct: 137 EALSYEIEVNGQRVELAAVSMGNPHGVL--RVEN----VDSAPVHSLGPQLEVHPRFPKK 190
Query: 185 TN 186
N
Sbjct: 191 AN 192
>Q39BY7_BURS3 (tr|Q39BY7) Diaminopimelate epimerase OS=Burkholderia sp. (strain
383) GN=Bcep18194_A6435 PE=3 SV=1
Length = 309
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 38 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGVDFKYRIFNCDGGEVEHCG 97
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ + VP
Sbjct: 98 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTMQDNGEVVVDMGAPVFTPAQVPFDAA 156
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + L+V G T ++ V+MGNPH V +VD+ + E GP
Sbjct: 157 GLDGRTEGHDTLWPLDVGGATRWISTVTMGNPHAVQ---------VVDDAEAYPVLEEGP 207
Query: 174 KFEHHAVFPARTNT 187
EHHA FP R N
Sbjct: 208 LIEHHARFPERVNA 221
>D4XSH0_ACIHA (tr|D4XSH0) Diaminopimelate epimerase OS=Acinetobacter haemolyticus
ATCC 19194 GN=dapF PE=3 SV=1
Length = 284
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Query: 18 KLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DR+FG+G D ++ P D+ RIFN+DGSE E CGNGVRCFARF+ E L
Sbjct: 34 RLADRHFGVGFDQLLIVEPPDFPDVDFKYRIFNADGSEVEQCGNGVRCFARFVHE-RRLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K + T AG++ PE+ +G V+V+MG P ++P ++D + S D +
Sbjct: 93 TKTKIRVQTKAGIVEPELGANGWVRVNMGPPKFLPDEIPFVTQVDEDIEGLYSLELADDK 152
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ N+ V+MGNPH VT D+L ++A IGP+ E H FP R N
Sbjct: 153 SINIDVVNMGNPHAVTI----VPDVL--TADVAGIGPQVESHVRFPERVNA 197
>D1UFK3_9BURK (tr|D1UFK3) Diaminopimelate epimerase OS=Burkholderia sp. CCGE1001
GN=dapF PE=3 SV=1
Length = 287
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 101/188 (53%), Gaps = 18/188 (9%)
Query: 7 TEP-RVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
T+P +TP Q L DR+FG+GAD ++ P +G D+ RIFN DG E E CGNG RC
Sbjct: 22 TQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVDGVDFRYRIFNCDGGEVEHCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---TRLPAN 121
F +F+ + L ++S + G I +QE+G+V VDMG P+ + VP L
Sbjct: 82 FVKFVRD-SGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGLPVFEPERVPFATKGLEGR 140
Query: 122 KDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHH 178
++ A L+V+G T ++ VSMGNPH V +VD++ + GP E H
Sbjct: 141 REGADTLWPLDVNGTTRWISVVSMGNPHAVQ---------VVDDVEAFPVLVEGPVIERH 191
Query: 179 AVFPARTN 186
A FP R N
Sbjct: 192 ARFPQRVN 199
>Q1PZ14_9BACT (tr|Q1PZ14) Diaminopimelate epimerase OS=Candidatus Kuenenia
stuttgartiensis GN=DapF PE=3 SV=1
Length = 277
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 99/178 (55%), Gaps = 22/178 (12%)
Query: 18 KLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
K+ DR+FG+G+DG+I +P + D MRIFN+DGSE +MCGNG+RC A+++ + L
Sbjct: 32 KISDRHFGVGSDGLILILP-SEIADCKMRIFNADGSEAQMCGNGIRCVAKYVYD-HALVR 89
Query: 78 KQSFTIHTGAGLIVPEIQEDGK----VKVDMGEPILKASDVPTRLPANKDDAVVKSELNV 133
K T+ T AG+ E+ + +V+MG P L ++P + VV L +
Sbjct: 90 KNPLTVETLAGIKTIELYTKNERVCSARVNMGRPKLMRPEIPM---VGAETQVVDEMLVL 146
Query: 134 DGET-WNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTNT 187
+ T + VTCVSMGNPHCV F VD+L I G EHH VFP RTN
Sbjct: 147 NENTSFRVTCVSMGNPHCVIF---------VDDLKQLHIEKDGKAIEHHRVFPERTNV 195
>C9L533_RUMHA (tr|C9L533) Diaminopimelate epimerase OS=Blautia hansenii DSM 20583
GN=BLAHAN_04483 PE=3 SV=1
Length = 277
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 101/178 (56%), Gaps = 15/178 (8%)
Query: 14 EQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELE 73
E + ++ DR+FGIG+DG+I + + D+ M ++N+DGS+ MCGNG+RC +++ +
Sbjct: 28 EVSRRISDRHFGIGSDGLIL-IKSSEKADFEMEMYNADGSQGAMCGNGMRCVGKYVYDY- 85
Query: 74 NLQGKQSFTIHTGAGL----IVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L K ++ T +G+ + E ++ +V+V+MGEP+L+ +P K V+
Sbjct: 86 GLTDKTRISVDTKSGIKYLDLTVENKKVKQVRVNMGEPVLETKAIPMIYDGEK---VISQ 142
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
NV + + +T VSMGNPH V + V +L L EIGPKFE H FP NT
Sbjct: 143 PFNVGQDIYEITAVSMGNPHAVVYVDN------VKSLPLEEIGPKFEKHTAFPESVNT 194
>D5NM52_9BURK (tr|D5NM52) Diaminopimelate epimerase OS=Burkholderia sp. Ch1-1
GN=dapF PE=3 SV=1
Length = 295
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 98/189 (51%), Gaps = 18/189 (9%)
Query: 7 TEP-RVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
T+P +TP Q L DR+FG+GAD ++ P G D+ RIFN DG E E CGNG RC
Sbjct: 22 TQPVNLTPAQVRALADRHFGVGADQLLLVEKPTVAGVDFRYRIFNCDGGEVEHCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---TRLPAN 121
F +F+ E L ++S + G + +QE+G+V VDMG P+ VP L
Sbjct: 82 FVKFVRE-RGLTDQRSVRVQVQKGTVTLTMQENGEVLVDMGTPVFDPERVPFATKGLEGR 140
Query: 122 KDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHH 178
++ A L+V G T ++ VSMGNPH V +VD++ + GP E H
Sbjct: 141 REGADTLWPLDVSGTTRWISAVSMGNPHAVQ---------VVDDVEAFPVLVEGPVIERH 191
Query: 179 AVFPARTNT 187
A FP R N
Sbjct: 192 ARFPQRVNA 200
>B4S2D9_ALTMD (tr|B4S2D9) Diaminopimelate epimerase OS=Alteromonas macleodii
(strain DSM 17117 / Deep ecotype) GN=MADE_00205 PE=3
SV=1
Length = 269
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 12/177 (6%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
+ E+ +L DRNFGIG D ++ P + D+ RIFN+DGSE E CGNG RCFARF+
Sbjct: 21 SKEKIQQLADRNFGIGFDQLLMVEPPYDPEQDFHYRIFNADGSEVEQCGNGARCFARFVK 80
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
+ + L + + T AG +V +++DG+V V+MG+P + +++P L ANK +
Sbjct: 81 Q-KGLINRNKIVVSTKAGKMVLYLEKDGQVTVNMGKPEFEPANIP--LKANKQENTYI-- 135
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
L V T + SMGNPHCV E D VD N+AEIGP E H F N
Sbjct: 136 LRVGESTLFIGAASMGNPHCVM----EVDD--VDTANVAEIGPLVEKHERFSEGVNV 186
>B1K0F5_BURCC (tr|B1K0F5) Diaminopimelate epimerase OS=Burkholderia cenocepacia
(strain MC0-3) GN=Bcenmc03_3102 PE=3 SV=1
Length = 309
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 38 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 97
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDV---PT 116
NG RCF +F+++ L ++S + GLI +Q++G+V VDMG P+ + V P+
Sbjct: 98 NGARCFVKFVSD-RGLTDRRSVRVQVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFEPS 156
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L ++ L+V G T ++ VSMGNPH V +VD++ + E GP
Sbjct: 157 GLDGRQEGNDTLWPLDVGGATRWISTVSMGNPHAVQ---------VVDDVEAYPVLEEGP 207
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 208 LIERHARFPQRVNA 221
>A2VUK2_9BURK (tr|A2VUK2) Diaminopimelate epimerase OS=Burkholderia cenocepacia
PC184 GN=BCPG_01678 PE=3 SV=1
Length = 309
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 38 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 97
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L ++S + GLI +Q++G+V VDMG P+ + VP
Sbjct: 98 NGARCFVKFVSD-RGLTDQRSVRVQVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFDAA 156
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + ++ L+V G T ++ VSMGNPH V +VD++ + E GP
Sbjct: 157 GLDSRQEGRDTLWPLDVGGATRWISTVSMGNPHAVQ---------VVDDVEAYPVLEEGP 207
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 208 LIERHARFPQRVNA 221
>C5S4E6_9PAST (tr|C5S4E6) Diaminopimelate epimerase OS=Actinobacillus minor NM305
GN=dapF PE=3 SV=1
Length = 274
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 18/180 (10%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T E KL DR+ GIG D ++ P + D+ RIFN+DGSE CGNG RCFARF+
Sbjct: 25 LTEEIIQKLADRHRGIGFDQLLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFV 84
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L+ L KQ + T G +V ++E+G+V+V+MGEPI + + +P + + ++++
Sbjct: 85 T-LKGLTNKQDIHVSTAKGKMVLSLKENGQVRVNMGEPIWEPAQIPFTANKFEKNYILRT 143
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPARTN 186
L +T VSMGNPHCV L V+++ A E+GP E+H FP R N
Sbjct: 144 SL----QTVLCGVVSMGNPHCV---------LQVEDIQTAPVNELGPLLENHERFPERAN 190
>D5C3E8_NITHN (tr|D5C3E8) Diaminopimelate epimerase OS=Nitrosococcus halophilus
(strain Nc4) GN=dapF PE=3 SV=1
Length = 276
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIF-AMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T Q ++ DR GIG D V+ A P + D+ RIFN+DG E E CGNG RCFARF+
Sbjct: 27 LTASQVRRIADRRLGIGCDQVLLVAPPPSPEVDFGYRIFNADGGEVEQCGNGARCFARFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
E + L GK+ + T G+I ++ D +V VDMG P ++P + D +
Sbjct: 87 RE-QGLTGKERLQVQTAGGVIRLHLETDKQVTVDMGVPRFAPDEIPFKADHEADSYL--- 142
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
L D + + VSMGNPHCV + +D +A GP E H FP R N
Sbjct: 143 -LEFDKQRVEIGAVSMGNPHCVL------RVAAIDAAPIACWGPILERHPRFPQRVNV 193
>A9BUI9_DELAS (tr|A9BUI9) Diaminopimelate epimerase OS=Delftia acidovorans
(strain DSM 14801 / SPH-1) GN=Daci_1453 PE=3 SV=1
Length = 286
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Query: 19 LCDRNFGIGADGVIFAMPG-TNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
L R FG+GAD ++ P G D+ I N+DG E E CGNG RCFAR++ + + L G
Sbjct: 35 LAHRQFGVGADQILTVRPSPAEGIDFEYVIHNADGGEVEQCGNGARCFARYVHD-KGLTG 93
Query: 78 KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS-------- 129
K + T AGLI PE+ DG+V VDMG+P+L+ P+ +P N D V +
Sbjct: 94 KSVIRVQTLAGLIAPELHADGRVTVDMGQPVLE----PSLVPFNGADLVPRPLGAAQQWP 149
Query: 130 -ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+L + W + VSMGNPH V VD+ +A GP E H FP R N
Sbjct: 150 LQLGDEATVW-IAPVSMGNPHAVQLVDD------VDHAPVATWGPLIERHVRFPQRVNA 201
>Q1H4X0_METFK (tr|Q1H4X0) Diaminopimelate epimerase OS=Methylobacillus
flagellatus (strain KT / ATCC 51484 / DSM 6875)
GN=Mfla_0196 PE=3 SV=1
Length = 290
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 12/171 (7%)
Query: 18 KLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DR+FGIG D ++ P G D+ RIFN+DG E E CGNG RCF R++ + ++L
Sbjct: 46 RLADRHFGIGFDQLLLVERPTVEGVDFRYRIFNADGGEVEQCGNGARCFVRYVHD-KSLT 104
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K+ + T G+I+P ++++G V V+MGEP + P +P D + L V +
Sbjct: 105 SKREIRVQTARGIILPRLEDNGLVTVNMGEPRFE----PAEVPFIADREAMTYLLQVADQ 160
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
++ SMGNPH VT VD + +GP E H FP R N
Sbjct: 161 ALEISVASMGNPHAVTVVED------VDTAPVERLGPLVERHERFPQRVNA 205
>B9CI10_9BURK (tr|B9CI10) Diaminopimelate epimerase OS=Burkholderia multivorans
CGD2M GN=dapF PE=3 SV=1
Length = 289
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D T P +T Q L R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 18 LDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ VP +
Sbjct: 78 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTMQDNGEVVVDMGAPVFAPEQVPFDAS 136
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFE 176
L + L + G T ++ VSMGNPH V ++D GP E
Sbjct: 137 GLDGRTEGRDTLWPLEIGGRTRWISTVSMGNPHAVQVVDDAEAYPVLDE------GPLIE 190
Query: 177 HHAVFPARTNT 187
HA FP R N
Sbjct: 191 RHARFPQRVNA 201
>B9BW48_9BURK (tr|B9BW48) Diaminopimelate epimerase OS=Burkholderia multivorans
CGD2 GN=dapF PE=3 SV=1
Length = 289
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D T P +T Q L R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 18 LDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ VP +
Sbjct: 78 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTMQDNGEVVVDMGAPVFAPEQVPFDAS 136
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFE 176
L + L + G T ++ VSMGNPH V ++D GP E
Sbjct: 137 GLDGRTEGRDTLWPLEIGGRTRWISTVSMGNPHAVQVVDDAEAYPVLDE------GPLIE 190
Query: 177 HHAVFPARTNT 187
HA FP R N
Sbjct: 191 RHARFPQRVNA 201
>B4E7Z8_BURCJ (tr|B4E7Z8) Diaminopimelate epimerase OS=Burkholderia cepacia
(strain J2315 / LMG 16656) GN=dapF PE=3 SV=1
Length = 309
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 38 LDGYSRALPPLTDAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 97
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ + VP
Sbjct: 98 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFDAA 156
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L ++ L+V G T ++ VSMGNPH V +VD+ + E GP
Sbjct: 157 GLDGRQEGRDTLWPLDVGGATRWISTVSMGNPHAVQ---------VVDDAEAYPVLEEGP 207
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 208 LIERHARFPQRVNA 221
>A9AC26_BURM1 (tr|A9AC26) Diaminopimelate epimerase OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=Bmul_3080 PE=3 SV=1
Length = 387
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D T P +T Q L R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 116 LDGYSRTLPPLTAAQVRALASRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 175
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---T 116
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ VP +
Sbjct: 176 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTMQDNGEVVVDMGAPVFAPEQVPFDAS 234
Query: 117 RLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGP 173
L + L V G T ++ VSMGNPH V +VD+ + E GP
Sbjct: 235 GLDGRSEGRDTLWPLEVGGRTRWISTVSMGNPHAVQ---------VVDDAEAYPVLEEGP 285
Query: 174 KFEHHAVFPARTNT 187
E HA FP R N
Sbjct: 286 LIERHARFPQRVNA 299
>D0SWR1_ACILW (tr|D0SWR1) Diaminopimelate epimerase OS=Acinetobacter lwoffii
SH145 GN=dapF PE=3 SV=1
Length = 281
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 99/183 (54%), Gaps = 11/183 (6%)
Query: 6 STEPRVTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
S + P +L +RNFGIG D ++ P D+ RIFN+DGSE E CGNGVRC
Sbjct: 22 SQRAYLDPVTIQRLANRNFGIGFDQLLVVEPPDVPSADFKYRIFNADGSEVEQCGNGVRC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDD 124
FA+F+ + L K + T +G++ PE+ +G V+V+MG P ++P A+ +
Sbjct: 82 FAKFVHD-RQLTTKTKIKVQTKSGIVEPELGANGWVRVNMGYPKFLPQEIP--FVADAPE 138
Query: 125 AVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPAR 184
++ +L GE + V+MGNPH VT V ++A IGP+ E HA FPAR
Sbjct: 139 SLYDIDL-AGGEKLTIDVVNMGNPHAVTIVPD------VIAADVARIGPQVEAHARFPAR 191
Query: 185 TNT 187
N
Sbjct: 192 VNA 194
>Q1ZDC8_9GAMM (tr|Q1ZDC8) Diaminopimelate epimerase OS=Psychromonas sp. CNPT3
GN=dapF PE=3 SV=1
Length = 275
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 97/174 (55%), Gaps = 18/174 (10%)
Query: 18 KLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DRNFGIG D ++ P + D+ RIFN+DGSE E CGNG RCFARF+ +L+ L
Sbjct: 34 RLADRNFGIGFDQLLLVEPPYDPELDFHYRIFNADGSEVEQCGNGARCFARFV-KLKGLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K+ + T G I +I++DG + VDMG+PI +P A K++ L V
Sbjct: 93 QKRVINVSTAKGKIQLKIEQDGNITVDMGKPIFDPHKIP--FVAKKEEKTYI--LRVQEH 148
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPARTNT 187
T VSMGNPHCV +LVD+++ A +GP E+H FP + N
Sbjct: 149 TVICGVVSMGNPHCV---------VLVDDIDSAPVDTLGPLLENHERFPNKVNV 193
>D0KXR5_HALNC (tr|D0KXR5) Diaminopimelate epimerase OS=Halothiobacillus
neapolitanus (strain ATCC 23641 / c2) GN=dapF PE=3 SV=1
Length = 281
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 96/178 (53%), Gaps = 13/178 (7%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+ PEQ + +R+FGIG D ++ P T T ++ RIFN+DG E E CGNG RCFAR++
Sbjct: 27 LNPEQIRQWANRHFGIGFDQLLIVEPPKTADTLFTYRIFNADGGEVEQCGNGARCFARYV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
+ + L ++ + T +G IV I + G V VDMG P+ PT +P +
Sbjct: 87 YD-KGLTTEKEIPVGTASGRIVLHINDSGDVTVDMGRPMF----TPTNIPFITECEATSY 141
Query: 130 ELNV-DGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
L + DG W + VSMGNPH V EN VD ++ +GP EHH FP R N
Sbjct: 142 PLTLDDGSEWVIDAVSMGNPHAVL--EVEN----VDTAPVSHLGPMIEHHRQFPNRVN 193
>B1FII7_9BURK (tr|B1FII7) Diaminopimelate epimerase OS=Burkholderia ambifaria
IOP40-10 GN=dapF PE=3 SV=1
Length = 294
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 101/199 (50%), Gaps = 22/199 (11%)
Query: 1 VDNRDSTEPRVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCG 59
+D P +T Q L +R+FGIGAD ++ P +G D+ RIFN DG E E CG
Sbjct: 18 LDGYSRALPPLTEAQVRALANRHFGIGADQLLLVEKPTVDGADFKYRIFNCDGGEVEHCG 77
Query: 60 NGVRCFARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---- 115
NG RCF +F+++ L K+S + GLI +Q++G+V VDMG P+ + VP
Sbjct: 78 NGARCFVKFVSD-RGLTDKRSVRVQVMKGLITLTLQDNGEVVVDMGAPVFAPAQVPFDTA 136
Query: 116 ----TRLPANKDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---L 168
+ L + L+V G T ++ VSMGNPH V +VD++ +
Sbjct: 137 GPGASGLDGRAEGRDTLWPLDVGGATRWISAVSMGNPHAVQ---------VVDDVEAYPV 187
Query: 169 AEIGPKFEHHAVFPARTNT 187
E GP E HA FP R N
Sbjct: 188 LEEGPLIERHARFPQRVNA 206
>C8KY75_9PAST (tr|C8KY75) Diaminopimelate epimerase OS=Actinobacillus minor 202
GN=dapF PE=3 SV=1
Length = 274
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T E KL DR+ GIG D ++ P D+ RIFN+DGSE CGNG RCFARF+
Sbjct: 25 LTQEIIQKLADRHRGIGFDQLLLVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFV 84
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L+ L KQ + T G +V ++E+G+V+V+MGEPI + + +P + + ++++
Sbjct: 85 T-LKGLTNKQDIHVSTAKGKMVLSLKENGQVRVNMGEPIWEPAQIPFTANKFEKNYILRT 143
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPARTN 186
L +T VSMGNPHCV L V+++ A E+GP E+H FP R N
Sbjct: 144 SL----QTVLCGVVSMGNPHCV---------LQVEDIKTAPVNELGPLLENHERFPERAN 190
>D0SBU7_ACIJO (tr|D0SBU7) Diaminopimelate epimerase OS=Acinetobacter johnsonii
SH046 GN=dapF PE=3 SV=1
Length = 281
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 18 KLCDRNFGIGADGVIFAMP-GTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
+L DR+FGIG D ++ P D+ RIFN+DGSE E CGNGVRCFARF+ E L
Sbjct: 34 RLADRHFGIGFDQLLIVEPPDLPNVDFKYRIFNADGSEVEQCGNGVRCFARFVHE-RQLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGE 136
K + T AG++ PE+ ++G V+V+MG P ++P A+ +A+ L + E
Sbjct: 93 TKTKIKVQTKAGIVEPELGQNGWVRVNMGYPKFLPQEIP--FIADAPEALYDIAL-ANNE 149
Query: 137 TWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+ V+MGNPH VT V ++A +GP+ E H FP R N
Sbjct: 150 QLTIDVVNMGNPHAVTIVPD------VITADVARLGPQVESHERFPQRVNA 194
>B0QSW6_HAEPR (tr|B0QSW6) Diaminopimelate epimerase OS=Haemophilus parasuis 29755
GN=nagB PE=3 SV=1
Length = 274
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 99/180 (55%), Gaps = 18/180 (10%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+T E K DR+ G+G D ++ P + D+ RIFN+DGSE CGNG RCFARF+
Sbjct: 25 LTEELIRKWADRHRGVGFDQLLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFV 84
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
L+ L KQ + T G +V +Q+DG+V+V+MGEPI + + +P ANK +
Sbjct: 85 T-LKGLTNKQDIGVSTAKGKMVLSLQDDGQVRVNMGEPIWEPAQIP--FTANKFEK--NY 139
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNL---NLAEIGPKFEHHAVFPARTN 186
L D +T VSMGNPHCV L V+N+ N+ E+G E H FP R N
Sbjct: 140 ILRTDIQTVLCGVVSMGNPHCV---------LQVENIQTANVNELGALLERHERFPERAN 190
>Q1N419_9GAMM (tr|Q1N419) Diaminopimelate epimerase OS=Bermanella marisrubri
GN=dapF PE=3 SV=1
Length = 278
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 21/182 (11%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIAE 71
PE +L DR FGIG D ++ P +N D+ RIFN+DGSE E CGNG RCFARF+ +
Sbjct: 29 PEFVRQLSDRQFGIGFDQLLIVEPPSNPEVDFRYRIFNADGSEVEQCGNGARCFARFVHD 88
Query: 72 LENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDA---VVK 128
+ L K + T +G+I I++DG V V+MG A P+ LP N + A V+
Sbjct: 89 VR-LTAKNPIKVETSSGIIELNIEQDGDVVVNMG----AARFSPSDLPFNAEQAERYQVQ 143
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLN---LAEIGPKFEHHAVFPART 185
LN T VSMGNPHCV ++VD+++ + ++GP+ E H FP R
Sbjct: 144 VPLNDGNYTAEFGAVSMGNPHCV---------MVVDDIHSELVNQLGPQLEGHEQFPKRV 194
Query: 186 NT 187
N
Sbjct: 195 NA 196
>C0B4X8_9FIRM (tr|C0B4X8) Diaminopimelate epimerase OS=Coprococcus comes ATCC
27758 GN=dapF PE=3 SV=1
Length = 275
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 101/178 (56%), Gaps = 15/178 (8%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
P A LCDR++GIGADG+I P + +D+ M I+NSDGS MCGNG+RC +++ +
Sbjct: 27 PGFARTLCDRHYGIGADGLILICP-SKVSDFKMEIYNSDGSVAGMCGNGIRCLGKYVYDY 85
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVK 128
L GK++ +I T +G+ + +DGK VDMG P L A +P ++ D V+
Sbjct: 86 R-LTGKETLSIETKSGIRNMHLHIQDGKACGAMVDMGVPRLNAHSIPI---LSEKDLVIN 141
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ V + + +T +SMGNPH V F + ++ ++L E G + E H FP R N
Sbjct: 142 DPIEVQKKNYRMTGISMGNPHAVIFLEE------INGISLEETGRELEFHPRFPERAN 193
>B5S7L4_RALSO (tr|B5S7L4) Diaminopimelate epimerase (Dap epimerase) protein
OS=Ralstonia solanacearum GN=dapF PE=3 SV=1
Length = 307
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 17/182 (9%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
TPEQ + DR+FG+GAD ++ T D+ RIFN DG E E CGNG RCF +F+
Sbjct: 43 TPEQWRAIADRHFGVGADQLLLVERATRPDVDFRYRIFNHDGGEVEHCGNGARCFVKFVT 102
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASD---VPTRLPANKDDAVV 127
+ L K++ + G+ +Q DG+V VDMG P+ +A+ VP LP +
Sbjct: 103 D-RGLTDKRTIRVEVMHGIATLTMQPDGQVTVDMGAPVFEAARLPFVPDGLPTRVEGRDA 161
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDN---LNLAEIGPKFEHHAVFPAR 184
+ L V+ T ++ VSMGNPH V +VD+ + E GP E HAVFP R
Sbjct: 162 QHALQVNDRTAWLSTVSMGNPHAVQ---------VVDDAEAFPVLEDGPLIESHAVFPRR 212
Query: 185 TN 186
N
Sbjct: 213 VN 214
>A4CFE1_9GAMM (tr|A4CFE1) Diaminopimelate epimerase OS=Pseudoalteromonas tunicata
D2 GN=dapF PE=3 SV=1
Length = 276
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 98/177 (55%), Gaps = 12/177 (6%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
+ +Q +KL DRNFGIG D ++ P D+ RIFNSDG+E E CGNG RCFARF+
Sbjct: 27 IARDQIIKLADRNFGIGFDQLLMVEAPYDPDLDFHYRIFNSDGTEVEQCGNGARCFARFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
++ L + + T +G + I++DG V V+MG+P L+ +P + ++ + ++
Sbjct: 87 -RMKGLTNRHKILVSTKSGNMTLHIEKDGLVSVNMGQPKLEPHTIPFKAAKRENTYIFRA 145
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTN 186
+ T VSMGNPHCV E D+ +N+ +GP E+H FP R N
Sbjct: 146 Q----DHTVFCGAVSMGNPHCVV----EVDDITTAPVNV--LGPLLENHERFPQRAN 192
>B5YD87_DICT6 (tr|B5YD87) Diaminopimelate epimerase OS=Dictyoglomus thermophilum
(strain ATCC 35947 / DSM 3960 / H-6-12) GN=dapF PE=3
SV=1
Length = 286
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 103/179 (57%), Gaps = 15/179 (8%)
Query: 14 EQAVKL-CDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
E+ ++L CDRN G+G+DG I + N ++ +RIFN DGSE E GNG+R A++I +
Sbjct: 28 EKNIRLICDRNRGVGSDG-ILVLEKINNQEFKVRIFNPDGSEAEKSGNGIRILAKYIYDY 86
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQE-DGKVK---VDMGEPILKASDVPTRLPANKDDAVVK 128
+ K+ F G + I+E +G+ K V+MG+ ++S++P P + V+
Sbjct: 87 KYTTEKEFFIYTLGGKVKASVIEEQNGRAKTIEVEMGKVTFRSSEIPVAGP---EREVID 143
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
EL ++GE +TC+S+GNPHCV F + +D + +GPK E++ +FP R N
Sbjct: 144 EELKINGEILKITCLSIGNPHCVFFVDE------IDEEKIKSLGPKIENNPIFPNRINV 196
>D5X3Z2_THIK (tr|D5X3Z2) Diaminopimelate epimerase OS=Thiomonas intermedia
(strain K12) GN=dapF PE=3 SV=1
Length = 287
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 95/177 (53%), Gaps = 19/177 (10%)
Query: 19 LCDRNFGIGADGVIF--AMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQ 76
L DR+FG+GAD ++ A P D+ RIFN+DG E E CGNG RCF ++ + L
Sbjct: 35 LADRHFGVGADQILLVEAAPSPE-VDFGYRIFNADGGEVEQCGNGARCFVAYV-HGKGLT 92
Query: 77 GKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTR---LPANKDDAVVKSELNV 133
K+ + T +GLI PE+Q DG+V VDMG P+ VP L + D + L++
Sbjct: 93 AKRRIRVQTLSGLIEPELQPDGRVTVDMGAPVFDLPRVPFEAHGLRPRQVDGWEQWPLDL 152
Query: 134 DGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTNT 187
G T V+ +SMGNPH V VD+++ A + GP EHH FP R N
Sbjct: 153 AGATAWVSVLSMGNPHAVQ---------RVDDVDTAPVLRDGPLIEHHPRFPRRVNA 200
>B5SE92_RALSO (tr|B5SE92) Diaminopimelate epimerase (Dap epimerase) protein
OS=Ralstonia solanacearum IPO1609 GN=dapF PE=3 SV=1
Length = 307
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 17/182 (9%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
TPEQ + DR+FG+GAD ++ T D+ RIFN DG E E CGNG RCF +F+
Sbjct: 43 TPEQWRAIADRHFGVGADQLLLVERSTRPDVDFRYRIFNHDGGEVEHCGNGARCFVKFVT 102
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASD---VPTRLPANKDDAVV 127
+ L K++ + G+ +Q DG+V VDMG P+ +A+ VP LP +
Sbjct: 103 D-RGLTDKRTIRVEVMHGIATLTMQPDGQVTVDMGAPVFEAARLPFVPDGLPTRVEGRDA 161
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDN---LNLAEIGPKFEHHAVFPAR 184
+ L V+ T ++ VSMGNPH V +VD+ + E GP E HAVFP R
Sbjct: 162 QHALQVNDRTAWLSTVSMGNPHAVQ---------VVDDTEAFPVLEDGPLIESHAVFPRR 212
Query: 185 TN 186
N
Sbjct: 213 VN 214
>A3RPS1_RALSO (tr|A3RPS1) Diaminopimelate epimerase OS=Ralstonia solanacearum
UW551 GN=RRSL_04332 PE=3 SV=1
Length = 307
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 96/182 (52%), Gaps = 17/182 (9%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
TPEQ + DR+FG+GAD ++ T D+ RIFN DG E E CGNG RCF +F+
Sbjct: 43 TPEQWRAIADRHFGVGADQLLLVERSTRPDVDFRYRIFNHDGGEVEHCGNGARCFVKFVT 102
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASD---VPTRLPANKDDAVV 127
+ L K++ + G+ +Q DG+V VDMG P+ +A+ VP LP +
Sbjct: 103 D-RGLTDKRTIRVEVMHGIATLTMQPDGQVTVDMGAPVFEAARLPFVPDGLPTRVEGRDA 161
Query: 128 KSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDN---LNLAEIGPKFEHHAVFPAR 184
+ L V+ T ++ VSMGNPH V +VD+ + E GP E HAVFP R
Sbjct: 162 QHALQVNDRTAWLSTVSMGNPHAVQ---------VVDDTEAFPVLEDGPLIESHAVFPRR 212
Query: 185 TN 186
N
Sbjct: 213 VN 214
>D3N760_9BURK (tr|D3N760) Diaminopimelate epimerase OS=Burkholderia sp. CCGE1003
GN=dapF PE=3 SV=1
Length = 287
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 18/189 (9%)
Query: 7 TEP-RVTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRC 64
T+P ++P Q L DR+FG+GAD ++ P G D+ RIFN DG E E CGNG RC
Sbjct: 22 TQPVNLSPAQVRALADRHFGVGADQLLLVEKPTVEGVDFRYRIFNCDGGEVEHCGNGARC 81
Query: 65 FARFIAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVP---TRLPAN 121
F +F+ + L ++S + G I +QE+G+V VDMG P+ + VP +
Sbjct: 82 FVKFVRD-SGLTDQRSVRVQVQKGTITLTMQENGEVLVDMGAPVFEPERVPFATKGIQGR 140
Query: 122 KDDAVVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHH 178
++ A L+V+G T ++ VSMGNPH V +VD++ + GP E H
Sbjct: 141 REGADTLWPLDVNGTTRWISVVSMGNPHAVQ---------VVDDVEAFPVLVEGPVIERH 191
Query: 179 AVFPARTNT 187
A FP R N
Sbjct: 192 ARFPQRVNA 200
>D3DYT5_METRM (tr|D3DYT5) Diaminopimelate epimerase OS=Methanobrevibacter
ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 /
M1) GN=dapF PE=3 SV=1
Length = 287
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 15/179 (8%)
Query: 13 PEQAVKLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAEL 72
PE +LC RNFG+G DGV+F +P ++ D R+FN DGSE EMCGNG+RCF F+
Sbjct: 36 PEACRQLCHRNFGVGGDGVLFVVP-SDVADIGYRMFNPDGSEAEMCGNGIRCFGDFVYRN 94
Query: 73 ENLQGKQSFTIHTGAGLIVPEIQ-EDGK---VKVDMGEPILKASDVPTRLPANKDDAVVK 128
+ ++ K++ T+ T +G+ EI EDG+ KV+MG+ K ++P + A+ D+ V
Sbjct: 95 KIVE-KETMTVETKSGIKTIEITVEDGEPVLFKVNMGKSTFKVPEIP--MIADTDE-FVD 150
Query: 129 SELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEIGPKFEHHAVFPARTNT 187
+L+V T+ TCV++GNPH + F + ++++ + GP E H VFP + N
Sbjct: 151 GDLDVIDTTFKATCVNVGNPHAILFVDNVD------DIDIDKYGPAIECHEVFPEKINV 203
>A0Y0F0_9GAMM (tr|A0Y0F0) Diaminopimelate epimerase OS=Alteromonadales bacterium
TW-7 GN=dapF PE=3 SV=1
Length = 276
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIFA-MPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFI 69
++ +Q KL DR+FGIG D ++ P + D+ RIFN+DG+E E CGNG RCFARF+
Sbjct: 27 LSRDQIKKLADRHFGIGFDQLLMVEAPYSPDLDFHYRIFNADGTEVEQCGNGARCFARFV 86
Query: 70 AELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKS 129
++ L K ++ T +G + I++DG+V V+MG P + S +P + + ++++
Sbjct: 87 -RMKGLTNKHKISVSTKSGNLTLYIEKDGQVTVNMGHPNFEPSKIPLKASKRELTYIIRA 145
Query: 130 ELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTN 186
E T VSMGNPHCV + VD++ A++ GP E+H FP R N
Sbjct: 146 E----EHTVFSGAVSMGNPHCV---------IEVDDITTAQVDVLGPLLENHERFPQRAN 192
>C6WT34_METML (tr|C6WT34) Diaminopimelate epimerase OS=Methylotenera mobilis
(strain JLW8 / ATCC BAA-1282 / DSM 17540) GN=dapF PE=3
SV=1
Length = 279
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 93/173 (53%), Gaps = 18/173 (10%)
Query: 18 KLCDRNFGIGADGVIFAMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARFIAELENLQG 77
KL +R FGIG D ++ + + D+ RIFN+DGSE CGNG RCF RF+ + + L
Sbjct: 36 KLANRQFGIGFDQLLL-VESSAVADFKYRIFNADGSEVSQCGNGARCFVRFVVD-QGLTQ 93
Query: 78 KQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDGET 137
++ ++ T +G+I P++++ G V V+MG P K P +P A L V+ +
Sbjct: 94 QREISVETASGIITPKLEDHGLVTVNMGAPRFK----PDAIPFVAASAATHYALEVNDQA 149
Query: 138 WNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTNT 187
+N+ VSMGNPH V L VD++ A + G EHH FP R N
Sbjct: 150 FNIAAVSMGNPHAV---------LTVDDVETAPVLPLGSAIEHHPRFPERVNV 193
>D3SCB6_THISK (tr|D3SCB6) Diaminopimelate epimerase OS=Thioalkalivibrio sp.
(strain K90mix) GN=dapF PE=3 SV=1
Length = 278
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 94/175 (53%), Gaps = 19/175 (10%)
Query: 18 KLCDRNFGIGADGVIFAMPGTNGTD--YSMRIFNSDGSEPEMCGNGVRCFARFIAELENL 75
+L DR+FGIG D ++ P + T + RIFN+DGSE E CGNG RCFARF+ E + L
Sbjct: 34 QLADRHFGIGCDQILLVEPPGDPTQALFRYRIFNADGSEVEQCGNGARCFARFVRE-QGL 92
Query: 76 QGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSELNVDG 135
+ + T G IV +++D V+V+MG+P+ P ++P + L+V G
Sbjct: 93 TEAREIPVETLGGRIVLHVEDDEHVRVNMGQPVFT----PEQIPLVAEHEADAYTLDVQG 148
Query: 136 ETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLA---EIGPKFEHHAVFPARTNT 187
+ VSMGNPH V LLVD++ A E+GP E H FP R N
Sbjct: 149 HAITLGAVSMGNPHAV---------LLVDDVASAPVTEVGPLIERHECFPRRVNV 194
>D6CV77_THIS3 (tr|D6CV77) Diaminopimelate epimerase OS=Thiomonas sp. (strain 3As)
GN=dapF PE=3 SV=1
Length = 287
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 98/185 (52%), Gaps = 19/185 (10%)
Query: 11 VTPEQAVKLCDRNFGIGADGVIF--AMPGTNGTDYSMRIFNSDGSEPEMCGNGVRCFARF 68
++ Q L DR+FG+GAD ++ A P D+ RIFN+DG E E CGNG RCF +
Sbjct: 27 LSAAQLRLLADRHFGVGADQILLVEAAPSPE-VDFGYRIFNADGGEVEQCGNGARCFVAY 85
Query: 69 IAELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTR---LPANKDDA 125
+ + L K+ + T +GLI PE+Q DG+V VDMG P+ VP L + D
Sbjct: 86 V-HGKGLTAKRRIRVQTLSGLIEPELQPDGRVTVDMGAPVFDLPRVPFEAHGLRPRQVDG 144
Query: 126 VVKSELNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFP 182
+ L++ G T V+ +SMGNPH V VD+++ A + GP EHH FP
Sbjct: 145 WEQWPLDLVGATAWVSVLSMGNPHAVQ---------RVDDVDTAPVLSHGPLIEHHPRFP 195
Query: 183 ARTNT 187
R N
Sbjct: 196 RRVNA 200
>Q2C2Q2_9GAMM (tr|Q2C2Q2) Diaminopimelate epimerase OS=Photobacterium sp. SKA34
GN=dapF PE=3 SV=1
Length = 276
Score = 117 bits (292), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 18/180 (10%)
Query: 12 TPEQAVKLCDRNFGIGADGVIFAMPGTN-GTDYSMRIFNSDGSEPEMCGNGVRCFARFIA 70
+P+ +L DR+ GIG D ++ P + TD+ RIFN+DGSE E CGNG RCFARF++
Sbjct: 28 SPDAIRRLADRHRGIGFDQLLVVEPPYDPETDFHYRIFNADGSEVEQCGNGARCFARFVS 87
Query: 71 ELENLQGKQSFTIHTGAGLIVPEIQEDGKVKVDMGEPILKASDVPTRLPANKDDAVVKSE 130
++ L K ++ T AG ++ +++ D +V V+MG PI + P+++P A
Sbjct: 88 -MKGLTNKYHISVSTKAGKMLLKLENDNQVTVNMGGPIFE----PSKIPMKAKQAEKTYI 142
Query: 131 LNVDGETWNVTCVSMGNPHCVTFGTKENKDLLVDNLNLAEI---GPKFEHHAVFPARTNT 187
L +T SMGNPHCVT +VDN++ A++ GP E H FP R N
Sbjct: 143 LRAGEQTLFCGAASMGNPHCVT---------VVDNVDTADVDTLGPLLESHERFPERVNA 193