Jatropha Genome Database

JcCB0242781.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0242781.20 + phase: 0 /partial
         (170 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9N8F9_POPTR (tr|B9N8F9) Predicted protein OS=Populus trichocarp...   251   2e-65
B9RXE9_RICCO (tr|B9RXE9) 26S protease regulatory subunit, putati...   245   1e-63
D7TR79_VITVI (tr|D7TR79) Whole genome shotgun sequence of line P...   200   3e-50
D7M160_ARALY (tr|D7M160) AAA-type ATPase family protein OS=Arabi...   168   2e-40
O81459_ARATH (tr|O81459) Putative vesicle transfer ATPase OS=Ara...   160   5e-38
B8AIG7_ORYSI (tr|B8AIG7) Putative uncharacterized protein OS=Ory...   144   3e-33
Q6Z7T4_ORYSJ (tr|Q6Z7T4) Os02g0740300 protein OS=Oryza sativa su...   144   4e-33
B9F2X2_ORYSJ (tr|B9F2X2) Putative uncharacterized protein OS=Ory...   144   4e-33
C5XZ70_SORBI (tr|C5XZ70) Putative uncharacterized protein Sb04g0...    91   3e-17
Q84W51_ARATH (tr|Q84W51) Putative vesicle transfer ATPase OS=Ara...    62   2e-08

>B9N8F9_POPTR (tr|B9N8F9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_931843 PE=3 SV=1
          Length = 562

 Score =  251 bits (641), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 133/174 (76%), Positives = 146/174 (83%), Gaps = 4/174 (2%)

Query: 1   MLQVAYADSDQ-AASKPTLSPDSPSSYQDLEEIAKKERQRIEELLRSKGMKYGSYPRFTV 59
           MLQVA+ADSD+ A+  P  S  SPSSY DLEEIAKKERQRIEELL+SKG+KYGS+PRFT+
Sbjct: 47  MLQVAHADSDENASKPPLPSESSPSSYGDLEEIAKKERQRIEELLKSKGIKYGSFPRFTI 106

Query: 60  ALKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRAWDSAVAWQLTLSC 119
           A+KGQKVTIKFQIPPACD PQLIANL  NLG+KVDERG GSDM LRAWDSAVAWQLTL+ 
Sbjct: 107 AVKGQKVTIKFQIPPACDTPQLIANLVSNLGVKVDERGAGSDMSLRAWDSAVAWQLTLNY 166

Query: 120 PEKQKESHGDNSSFAE---PEGDLCILLFRSLISRDKAEIEFIKSGRLSETELD 170
           PEKQKE  G+     +   PEGDLCILLFRSLIS DK E+EFIKSG LS TELD
Sbjct: 167 PEKQKEISGERGHSGDMKVPEGDLCILLFRSLISSDKPEVEFIKSGSLSTTELD 220


>B9RXE9_RICCO (tr|B9RXE9) 26S protease regulatory subunit, putative OS=Ricinus
           communis GN=RCOM_0903260 PE=3 SV=1
          Length = 587

 Score =  245 bits (626), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 131/173 (75%), Positives = 141/173 (81%), Gaps = 3/173 (1%)

Query: 1   MLQVAYADSDQAASKPTLSPDSPSSYQDLEEIAKKERQRIEELLRSKGMKYGSYPRFTVA 60
           M QVAYADSDQAA+KP+L  +SPSSY+DLEEIA KERQRIE LL+ +G+K GSYPRF VA
Sbjct: 71  MFQVAYADSDQAAAKPSLPSESPSSYKDLEEIATKERQRIEGLLKLRGIKNGSYPRFMVA 130

Query: 61  LKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRAWDSAVAWQLTLSCP 120
           +KGQKVTIKFQIPPACD   LIANL  NLGLKVDER GGSDM LRAWDSAVAWQLTLS P
Sbjct: 131 VKGQKVTIKFQIPPACDALHLIANLVSNLGLKVDERAGGSDMLLRAWDSAVAWQLTLSSP 190

Query: 121 EKQKESHGDNSSFAE---PEGDLCILLFRSLISRDKAEIEFIKSGRLSETELD 170
           EK KE+  D   F +    EGDLCI LFRSLIS DKAEIEFIK G LS TELD
Sbjct: 191 EKHKEAGVDKGQFVDMNTAEGDLCIFLFRSLISTDKAEIEFIKGGSLSTTELD 243


>D7TR79_VITVI (tr|D7TR79) Whole genome shotgun sequence of line PN40024,
           scaffold_235.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00004817001 PE=4 SV=1
          Length = 596

 Score =  200 bits (509), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/180 (60%), Positives = 130/180 (72%), Gaps = 10/180 (5%)

Query: 1   MLQVAYADSDQAASKPTLSPDSPSS-------YQDLEEIAKKERQRIEELLRSKGMKYGS 53
           +L++A+A+SD  A K  L   S  S       Y +LEE A+K R R+EEL+R+KGMKYGS
Sbjct: 72  LLEIAHAESDPGADKTPLPSQSSPSPSESPPSYTNLEENARKLRDRLEELIRTKGMKYGS 131

Query: 54  YPRFTVALKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRAWDSAVAW 113
           YPRFTVALKGQKVTIKFQIPP C+VP LIA L   LG+KV+ER GGSDM +RAWDS +AW
Sbjct: 132 YPRFTVALKGQKVTIKFQIPPTCEVPCLIAKLVAQLGMKVEERSGGSDMIMRAWDSGIAW 191

Query: 114 QLTLSCPEKQKESHGD--NSSFAEP-EGDLCILLFRSLISRDKAEIEFIKSGRLSETELD 170
           QL LS   KQ ++  +  +S +    EGDLCIL+F+SLIS DKAEIEFIK G  S  ELD
Sbjct: 192 QLMLSRLGKQNKTGAEQVHSQYTNANEGDLCILIFQSLISADKAEIEFIKQGSFSSEELD 251


>D7M160_ARALY (tr|D7M160) AAA-type ATPase family protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_911688 PE=4 SV=1
          Length = 602

 Score =  168 bits (425), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/184 (50%), Positives = 123/184 (66%), Gaps = 21/184 (11%)

Query: 2   LQVAYADSDQ--------------AASKPTLSP-DSPSSYQDLEEIAKKERQRIEELLRS 46
           + VAYA+SD+              A +  + +P D P +Y D   IAKKER RIEEL+ S
Sbjct: 82  IGVAYAESDEVFFTDSSLKLTFLKATNDKSSAPIDPPPNYVD---IAKKERARIEELISS 138

Query: 47  KGMKYGSYPRFTVALKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRA 106
           KG +YGSYPRF VA++GQK+T+KFQ+P  C+V QLI+N+   LG+KV +R GGSDM LRA
Sbjct: 139 KGTQYGSYPRFNVAVRGQKITLKFQVPSTCEVAQLISNIGSQLGVKVSDRTGGSDMLLRA 198

Query: 107 WDSAVAWQLTLSCPEKQKESHGDNSSFAEPEGDLCILLFRSLISRDKAEIEFIKSGRLSE 166
           WD+ VAWQ+TL   E +K+      S  + + DLCIL+F SL++ DK E+EFIK G L+ 
Sbjct: 199 WDNPVAWQITLRSVENKKKL---GESEDDSDDDLCILIFGSLLTSDKVEVEFIKKGSLTT 255

Query: 167 TELD 170
            EL+
Sbjct: 256 EELE 259


>O81459_ARATH (tr|O81459) Putative vesicle transfer ATPase OS=Arabidopsis
           thaliana GN=AT4g04180 PE=3 SV=1
          Length = 536

 Score =  160 bits (405), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 23/182 (12%)

Query: 1   MLQVAYADSDQAASKPTLSP------------DSPSSYQDLEEIAKKERQRIEELLRSKG 48
           ++ VAYA+SD+A +  + +P            D P +Y D   IAKKER R+EEL++SKG
Sbjct: 14  VIGVAYAESDEANNDKSSAPIDPNDETSSAPIDPPPNYVD---IAKKERARVEELIQSKG 70

Query: 49  MKYGSYPRFTVALKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRAWD 108
            +YGSYPRF VA     +T+KFQ+P  C+V QLI+N+   LG+KV +R GGSDM LRAWD
Sbjct: 71  TQYGSYPRFNVA-----ITLKFQVPSTCEVAQLISNIGSQLGVKVSDRTGGSDMLLRAWD 125

Query: 109 SAVAWQLTLSCPEKQKESHGDNSSFAEPEGDLCILLFRSLISRDKAEIEFIKSGRLSETE 168
           + VAWQ+TL   E +K+      S  + + DLCIL+F SL++ DK E+EFIK G L+  E
Sbjct: 126 NPVAWQITLRSVENKKKL---GESEDDSDDDLCILIFGSLLTSDKVEVEFIKKGSLTTEE 182

Query: 169 LD 170
           L+
Sbjct: 183 LE 184


>B8AIG7_ORYSI (tr|B8AIG7) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_08877 PE=3 SV=1
          Length = 612

 Score =  144 bits (363), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 83/187 (44%), Positives = 121/187 (64%), Gaps = 26/187 (13%)

Query: 2   LQVAYADSDQ-----------AASKPTLSPDSPSSYQDL---EEIAKKERQRIEELLRSK 47
           L VAYAD+++           AA KP ++PD+  S  D+   E++A KER+RI EL++S+
Sbjct: 85  LPVAYADANEVGVVDSAVSSDAAVKP-VNPDAAVS-SDVAVGEDLAHKERKRIMELIQSR 142

Query: 48  GMKYGSYPRFTVALKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRAW 107
           GM +GSYP+F VA+KGQKV +KF +P  C +  LI +L  ++GL+ ++ GGGS+M LRAW
Sbjct: 143 GMPHGSYPQFDVAVKGQKVVVKFNVPSTCSLSDLIVDLVTHIGLEAEQGGGGSEMLLRAW 202

Query: 108 DSAVAWQLTLSCPEKQKESHGDNSSFAEPEGDLCILLFRSLI----SRDKAEIEFIKSGR 163
           +S  A Q+TL+ P K+  S+GD++     E DLC+L+F  L+    S    E+EFIK G 
Sbjct: 203 NSVAARQITLN-PHKKTTSNGDDN-----EDDLCVLIFEPLVGSQYSVSSYEVEFIKRGG 256

Query: 164 LSETELD 170
            S  EL+
Sbjct: 257 FSLRELE 263


>Q6Z7T4_ORYSJ (tr|Q6Z7T4) Os02g0740300 protein OS=Oryza sativa subsp. japonica
           GN=P0516G10.11 PE=2 SV=1
          Length = 611

 Score =  144 bits (362), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/186 (44%), Positives = 121/186 (65%), Gaps = 25/186 (13%)

Query: 2   LQVAYADSDQ----------AASKPTLSPDSPSSYQDL---EEIAKKERQRIEELLRSKG 48
           L VAYAD+++          AA KP ++PD+  S  D+   E++A KER+RI EL++S+G
Sbjct: 85  LPVAYADANEGVVDSAVSSDAAVKP-VNPDAAVS-SDVAVGEDLAHKERKRIIELIQSRG 142

Query: 49  MKYGSYPRFTVALKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRAWD 108
           M +GSYP+F VA+KGQKV +KF +P  C +  LI +L  ++GL+ ++ GGGS+M LRAW+
Sbjct: 143 MPHGSYPQFDVAVKGQKVVVKFNVPSTCSLSDLIVDLVTHIGLEAEQGGGGSEMLLRAWN 202

Query: 109 SAVAWQLTLSCPEKQKESHGDNSSFAEPEGDLCILLFRSLI----SRDKAEIEFIKSGRL 164
           S  A Q+TL+ P K+  S+GD++     E DLC+L+F  L+    S    E+EFIK G  
Sbjct: 203 SVAARQITLN-PHKKTTSNGDDN-----EDDLCVLIFEPLVGSQYSVSSYEVEFIKRGGF 256

Query: 165 SETELD 170
           S  EL+
Sbjct: 257 SLRELE 262


>B9F2X2_ORYSJ (tr|B9F2X2) Putative uncharacterized protein OS=Oryza sativa subsp.
           japonica GN=OsJ_08323 PE=3 SV=1
          Length = 612

 Score =  144 bits (362), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/187 (44%), Positives = 121/187 (64%), Gaps = 26/187 (13%)

Query: 2   LQVAYADSDQ-----------AASKPTLSPDSPSSYQDL---EEIAKKERQRIEELLRSK 47
           L VAYAD+++           AA KP ++PD+  S  D+   E++A KER+RI EL++S+
Sbjct: 85  LPVAYADANEVGVVDSAVSSDAAVKP-VNPDAAVS-SDVAVGEDLAHKERKRIIELIQSR 142

Query: 48  GMKYGSYPRFTVALKGQKVTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDMRLRAW 107
           GM +GSYP+F VA+KGQKV +KF +P  C +  LI +L  ++GL+ ++ GGGS+M LRAW
Sbjct: 143 GMPHGSYPQFDVAVKGQKVVVKFNVPSTCSLSDLIVDLVTHIGLEAEQGGGGSEMLLRAW 202

Query: 108 DSAVAWQLTLSCPEKQKESHGDNSSFAEPEGDLCILLFRSLI----SRDKAEIEFIKSGR 163
           +S  A Q+TL+ P K+  S+GD++     E DLC+L+F  L+    S    E+EFIK G 
Sbjct: 203 NSVAARQITLN-PHKKTTSNGDDN-----EDDLCVLIFEPLVGSQYSVSSYEVEFIKRGG 256

Query: 164 LSETELD 170
            S  EL+
Sbjct: 257 FSLRELE 263


>C5XZ70_SORBI (tr|C5XZ70) Putative uncharacterized protein Sb04g028420 OS=Sorghum
           bicolor GN=Sb04g028420 PE=3 SV=1
          Length = 543

 Score = 91.3 bits (225), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 69/97 (71%), Gaps = 3/97 (3%)

Query: 6   YADSDQAASKPTLSPDSPSSYQDLEEIAKKERQRIEELLRSKGMKYGSYPRFTVALKGQK 65
           YADS++  +   ++   P+  +DL   A+KER+RI EL++S+GM+ GSYP+F VA+KGQK
Sbjct: 90  YADSNEQGAVDKVASADPAEGEDL---ARKERKRILELVQSRGMQRGSYPQFDVAVKGQK 146

Query: 66  VTIKFQIPPACDVPQLIANLAMNLGLKVDERGGGSDM 102
           + +KF +P  C+V  LI +L  ++G + ++ GGGS++
Sbjct: 147 LVVKFNMPSTCNVSHLIVDLVTHIGHEAEQLGGGSEV 183


>Q84W51_ARATH (tr|Q84W51) Putative vesicle transfer ATPase OS=Arabidopsis
           thaliana GN=At4g04180 PE=2 SV=1
          Length = 180

 Score = 62.4 bits (150), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 3/69 (4%)

Query: 102 MRLRAWDSAVAWQLTLSCPEKQKESHGDNSSFAEPEGDLCILLFRSLISRDKAEIEFIKS 161
           M LRAWD+ VAWQ+TL   E +K+      S  + + DLCIL+F SL++ DK E+EFIK 
Sbjct: 1   MLLRAWDNPVAWQITLRSVENKKKL---GESEDDSDDDLCILIFGSLLTSDKVEVEFIKK 57

Query: 162 GRLSETELD 170
           G L+  EL+
Sbjct: 58  GSLTTEELE 66