Jatropha Genome Database

JcCB0238621.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0238621.10 - phase: 0 /pseudo/partial
         (145 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9HAW0_POPTR (tr|B9HAW0) Aspartate aminotransferase OS=Populus t...    82   2e-14
B9RNY6_RICCO (tr|B9RNY6) Aspartate aminotransferase OS=Ricinus c...    80   9e-14
B9IL28_POPTR (tr|B9IL28) Aspartate aminotransferase OS=Populus t...    77   5e-13
D7SUZ6_VITVI (tr|D7SUZ6) Whole genome shotgun sequence of line P...    69   2e-10
A5AZ93_VITVI (tr|A5AZ93) Aspartate aminotransferase OS=Vitis vin...    69   2e-10
A5AKW6_VITVI (tr|A5AKW6) Putative uncharacterized protein OS=Vit...    58   3e-07
P93763_CANLI (tr|P93763) Aspartate aminotransferase OS=Canavalia...    57   6e-07
O20099_CANLI (tr|O20099) Aspartate aminotransferase 2 OS=Canaval...    57   8e-07

>B9HAW0_POPTR (tr|B9HAW0) Aspartate aminotransferase OS=Populus trichocarpa
           GN=POPTRDRAFT_654206 PE=3 SV=1
          Length = 466

 Score = 81.6 bits (200), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 5/115 (4%)

Query: 19  VHETLKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFL 78
           + E LKGK R G+GS++T FNKEK N F   KS GRISM +AVNVSRFEGI MAP    L
Sbjct: 19  MQEILKGKARLGSGSVSTLFNKEKGNPFIKAKSFGRISMTVAVNVSRFEGIAMAPPDPIL 78

Query: 79  VYQKLFEQTQMIXNSTLELGP---TELKSYILMFSMLLRRQRILCWRGVNIKRYP 130
              + F     +    L +G     EL+ Y+L   ++ + + ++  RG N +  P
Sbjct: 79  GVSEAFRADTDVKKLNLGVGAYRTEELQPYVL--DVVKKAENLMLERGENKEYLP 131


>B9RNY6_RICCO (tr|B9RNY6) Aspartate aminotransferase OS=Ricinus communis
           GN=RCOM_0922300 PE=3 SV=1
          Length = 464

 Score = 79.7 bits (195), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 5/115 (4%)

Query: 19  VHETLKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFL 78
           +H+TLK KVR G+GS+ TWF K+K + F  TKS GRISM  AVN+SRFEGITMA     L
Sbjct: 17  MHDTLKEKVRLGSGSIGTWFTKDKVHSFMKTKSSGRISMTAAVNISRFEGITMALPDPIL 76

Query: 79  VYQKLFEQTQMIXNSTLELGP---TELKSYILMFSMLLRRQRILCWRGVNIKRYP 130
              + F          L +G     EL  Y+L   ++ + + ++  RG N +  P
Sbjct: 77  GVSEAFRADNDAKKLNLGVGAYRTEELHPYVL--DVVKKAENLMLERGENKEYLP 129


>B9IL28_POPTR (tr|B9IL28) Aspartate aminotransferase OS=Populus trichocarpa
           GN=POPTRDRAFT_835828 PE=3 SV=1
          Length = 466

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 5/110 (4%)

Query: 19  VHETLKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFL 78
           V ETLKGK+R G+ S++T FNKEK N     KS GRISM +AVNVSRFEGI MAP    L
Sbjct: 19  VQETLKGKMRLGSSSVSTLFNKEKGNPSIKKKSFGRISMTVAVNVSRFEGIAMAPPDPIL 78

Query: 79  VYQKLFEQTQMIXNSTLELGP---TELKSYILMFSMLLRRQRILCWRGVN 125
              + F     +    L +G     EL+ Y+L   ++ + + ++  RG N
Sbjct: 79  GVSEAFRADIDVKKLNLGVGAYRTEELQPYVL--DVVKKAENLMLERGEN 126


>D7SUZ6_VITVI (tr|D7SUZ6) Whole genome shotgun sequence of line PN40024,
           scaffold_8.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00035914001 PE=4 SV=1
          Length = 462

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 19  VHETLKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFL 78
           + E  KGK+  G+   +++  KEK N F  TKS GRI+MAIAVN SRFEG+TMAP    L
Sbjct: 15  LQENHKGKMNLGSSDCSSFLRKEKRNPFMKTKSFGRINMAIAVNTSRFEGVTMAPPDPIL 74

Query: 79  VYQKLFEQTQMIXNSTLELG-------PTELKSYILMFSMLLRRQRILCWRGVNIKRYP 130
              + F       NS ++L          EL+ Y+L  +++ + + ++  RG N +  P
Sbjct: 75  GVSEAFRAD----NSEMKLNLGVGAYRTEELQPYVL--NVVKKAENLMLERGENKEYLP 127


>A5AZ93_VITVI (tr|A5AZ93) Aspartate aminotransferase OS=Vitis vinifera
           GN=VITISV_000267 PE=3 SV=1
          Length = 462

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 65/119 (54%), Gaps = 13/119 (10%)

Query: 19  VHETLKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFL 78
           + E  KGK+  G+   +++  KEK N F  TKS GRI+MAIAVN SRFEG+TMAP    L
Sbjct: 15  LQENHKGKMNLGSSDCSSFLRKEKRNPFMKTKSFGRINMAIAVNTSRFEGVTMAPPDPIL 74

Query: 79  VYQKLFEQTQMIXNSTLELG-------PTELKSYILMFSMLLRRQRILCWRGVNIKRYP 130
              + F       NS ++L          EL+ Y+L  +++ + + ++  RG N +  P
Sbjct: 75  GVSEAFRAD----NSEMKLNLGVGAYRTEELQPYVL--NVVKKAENLMLKRGENKEYLP 127


>A5AKW6_VITVI (tr|A5AKW6) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_034785 PE=4 SV=1
          Length = 420

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 30  GTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFLVYQKLFEQTQM 89
           G+   +++  KEK N F  TKS GRI+MAIAVN SRFEG+TMAP    L   + F     
Sbjct: 4   GSSDCSSFLRKEKRNPFMKTKSFGRINMAIAVNTSRFEGVTMAPPDPILGVSEAFRADNS 63

Query: 90  IXNSTLELGP---TELKSYIL 107
                L +G     EL+ Y+L
Sbjct: 64  EMKLNLGVGAYRTEELQPYVL 84


>P93763_CANLI (tr|P93763) Aspartate aminotransferase OS=Canavalia lineata GN=AAT2
           PE=2 SV=1
          Length = 465

 Score = 57.0 bits (136), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 6/111 (5%)

Query: 23  LKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFLVYQK 82
           LKGK R G  +L    NK  +N F +++S GRISMA+A NVSRFEGI MAP    L   +
Sbjct: 23  LKGKPRLGDNALRFSGNKGGSNAF-SSRSRGRISMAVADNVSRFEGIPMAPPDPILGVSE 81

Query: 83  LFEQTQMIXNSTLELGP---TELKSYILMFSMLLRRQRILCWRGVNIKRYP 130
            F+         L +G     EL+ Y+L  +++ + + ++  RG N +  P
Sbjct: 82  AFKADNSDVKLNLGVGAYRTEELQPYVL--NVVKKAENLMLERGQNKEYLP 130


>O20099_CANLI (tr|O20099) Aspartate aminotransferase 2 OS=Canavalia lineata
           GN=aspartate aminotransferase 2 PE=4 SV=2
          Length = 465

 Score = 56.6 bits (135), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 23  LKGKVRHGTGSLTTWFNKEKANRFRNTKSPGRISMAIAVNVSRFEGITMAPLIQFLVYQK 82
           LKGK R G  +L    NK  +N F +++S GRISMA+A NVSRFEGI MAP    L   +
Sbjct: 23  LKGKPRLGDNALRFSGNKGGSNAF-SSRSRGRISMAVADNVSRFEGIPMAPPDPILGVSE 81

Query: 83  LFEQTQMIXNSTLELGP---TELKSYILMFSMLLRRQRILCWRGVNIKRYP 130
            F          L +G     EL+ Y+L  +++ + + ++  RG N +  P
Sbjct: 82  AFRADNSDVKLNLGVGAYRTEELQPYVL--NVVKKAENLMLERGQNKEYVP 130