Jatropha Genome Database
- JcCB0231591.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0231591.10 + phase: 1 /pseudo/partial
(158 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RNV9_RICCO (tr|B9RNV9) DNA-directed RNA polymerase OS=Ricinus ... 157 3e-37
D7SV38_VITVI (tr|D7SV38) Whole genome shotgun sequence of line P... 155 1e-36
B9IL57_POPTR (tr|B9IL57) DNA-directed RNA polymerase OS=Populus ... 151 2e-35
Q17U54_SOLBU (tr|Q17U54) DNA-directed RNA polymerase OS=Solanum ... 147 5e-34
Q1L6W5_RHOMC (tr|Q1L6W5) DNA-directed RNA polymerase (Fragment) ... 144 2e-33
Q1L6W3_ANTMA (tr|Q1L6W3) DNA-directed RNA polymerase (Fragment) ... 143 6e-33
D7L3H4_ARALY (tr|D7L3H4) Putative uncharacterized protein OS=Ara... 139 8e-32
Q67ZK6_ARATH (tr|Q67ZK6) DNA-directed RNA polymerase OS=Arabidop... 138 2e-31
Q1ANE6_ARATH (tr|Q1ANE6) DNA-directed RNA polymerase (Fragment) ... 138 2e-31
D7L7Z5_ARALY (tr|D7L7Z5) NRPD2a OS=Arabidopsis lyrata subsp. lyr... 137 3e-31
Q9LK40_ARATH (tr|Q9LK40) DNA-directed RNA polymerase OS=Arabidop... 137 3e-31
Q9LV32_ARATH (tr|Q9LV32) DNA-directed RNA polymerase OS=Arabidop... 137 4e-31
Q07DU9_MAIZE (tr|Q07DU9) DNA-directed RNA polymerase (Fragment) ... 131 2e-29
D2WKI0_MAIZE (tr|D2WKI0) DNA-directed RNA polymerase OS=Zea mays... 131 2e-29
Q7XTQ7_ORYSJ (tr|Q7XTQ7) DNA-directed RNA polymerase OS=Oryza sa... 131 2e-29
B8AV78_ORYSI (tr|B8AV78) DNA-directed RNA polymerase OS=Oryza sa... 131 2e-29
Q7F9D6_ORYSJ (tr|Q7F9D6) DNA-directed RNA polymerase OS=Oryza sa... 131 2e-29
B9FCT0_ORYSJ (tr|B9FCT0) DNA-directed RNA polymerase OS=Oryza sa... 131 2e-29
Q259Y6_ORYSA (tr|Q259Y6) DNA-directed RNA polymerase OS=Oryza sa... 131 2e-29
D2WKH8_MAIZE (tr|D2WKH8) DNA-directed RNA polymerase OS=Zea mays... 131 2e-29
Q0J9N2_ORYSJ (tr|Q0J9N2) DNA-directed RNA polymerase (Fragment) ... 131 2e-29
C5Y8Y9_SORBI (tr|C5Y8Y9) DNA-directed RNA polymerase OS=Sorghum ... 127 3e-28
C5WRS0_SORBI (tr|C5WRS0) DNA-directed RNA polymerase OS=Sorghum ... 125 2e-27
C0HER7_MAIZE (tr|C0HER7) Putative uncharacterized protein OS=Zea... 108 3e-22
C5YHJ3_SORBI (tr|C5YHJ3) DNA-directed RNA polymerase OS=Sorghum ... 107 5e-22
Q0J7Q4_ORYSJ (tr|Q0J7Q4) DNA-directed RNA polymerase OS=Oryza sa... 102 1e-20
Q6YYK5_ORYSJ (tr|Q6YYK5) DNA-directed RNA polymerase OS=Oryza sa... 101 2e-20
A3BQ32_ORYSJ (tr|A3BQ32) DNA-directed RNA polymerase OS=Oryza sa... 101 3e-20
Q1L6W2_GINBI (tr|Q1L6W2) DNA-directed RNA polymerase (Fragment) ... 95 2e-18
Q1L6V6_SOLLC (tr|Q1L6V6) DNA-directed RNA polymerase (Fragment) ... 72 2e-11
A2YRP1_ORYSI (tr|A2YRP1) DNA-directed RNA polymerase OS=Oryza sa... 72 2e-11
Q1L6W0_9TRAC (tr|Q1L6W0) DNA-directed RNA polymerase (Fragment) ... 57 5e-07
C5Y5J9_SORBI (tr|C5Y5J9) Putative uncharacterized protein Sb05g0... 56 1e-06
>B9RNV9_RICCO (tr|B9RNV9) DNA-directed RNA polymerase OS=Ricinus communis
GN=RCOM_0920920 PE=3 SV=1
Length = 1203
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 104/166 (62%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N RTGEMV SLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1046 ERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1101
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSR 112
G R C+ + +RL L+D+ CKN NVI+R VP R
Sbjct: 1102 ----GGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRAVPGGR 1157
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYCR+CES D+ VKVN+PYGAK+LCQELFSMGISLKFET+LC
Sbjct: 1158 KIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGISLKFETRLC 1203
>D7SV38_VITVI (tr|D7SV38) Whole genome shotgun sequence of line PN40024,
scaffold_8.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00035963001 PE=4 SV=1
Length = 1220
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 107/166 (64%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N RTGEM+ SLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1063 ERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRF---- 1118
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LAD-AYL---PDCKNFTNVIERTVPQSR 112
G R C+ A +RL L+D AY+ CKN +NVI+R+V R
Sbjct: 1119 ----GGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNVIQRSVAGGR 1174
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
K++ PYCR CES+++ VKVN+PYGAK+LCQELFSMGISLKFETQLC
Sbjct: 1175 KVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1220
>B9IL57_POPTR (tr|B9IL57) DNA-directed RNA polymerase OS=Populus trichocarpa
GN=POPTRDRAFT_737361 PE=3 SV=1
Length = 1160
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 103/166 (62%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N RTGEMV SLIFMGPTFYQ+LVHMA DKVKF G P T Q V R
Sbjct: 1003 ERVYNGRTGEMVRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1058
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSR 112
G R C+ + +RL L+D+ CKN NVI+R VP R
Sbjct: 1059 ----GGIKFGEMERDCLIAHGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGR 1114
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYCR+CES DD VKV++PYGAK+LCQELFSMGISLKF+T++
Sbjct: 1115 KIRGPYCRVCESVDDLVKVSVPYGAKLLCQELFSMGISLKFDTRVS 1160
>Q17U54_SOLBU (tr|Q17U54) DNA-directed RNA polymerase OS=Solanum bulbocastanum
GN=SBB1_14t00023 PE=3 SV=1
Length = 304
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 104/165 (63%), Gaps = 15/165 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N RTGEMVHSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R + F
Sbjct: 148 ERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR-KRFGGI 206
Query: 60 QVW*DGA*LPHSSRCICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSRK 113
+ C+ A +RL L+D+ CKN NVI+R+ P K
Sbjct: 207 KFG------EMERDCLIAHGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG-K 259
Query: 114 IKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
I+ P+CR CES +D VKV++PYGAK+LCQELFSMGISLKF+T++C
Sbjct: 260 IRGPFCRFCESVEDIVKVDVPYGAKLLCQELFSMGISLKFDTEIC 304
>Q1L6W5_RHOMC (tr|Q1L6W5) DNA-directed RNA polymerase (Fragment) OS=Rhododendron
macrophyllum GN=RPD2 PE=2 SV=1
Length = 1019
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 101/164 (61%), Gaps = 14/164 (8%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N RTGEM+HSL+FMGPTFYQ+L HM+ DKVKF G P T Q V R + F
Sbjct: 862 ERVYNGRTGEMIHSLVFMGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVADR-KRFGGI 920
Query: 60 QVW*DGA*LPHSSRCICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSRK 113
+ C+ A +RL L+D+ C N NVI+R VP RK
Sbjct: 921 KFG------EMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCNNIANVIQRAVPGGRK 974
Query: 114 IKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQL 157
I+ PYCR CES ++ V+VN+PYGAK+L QELFSMGI++KF+T+L
Sbjct: 975 IRGPYCRFCESVEEIVRVNVPYGAKLLAQELFSMGITMKFDTEL 1018
>Q1L6W3_ANTMA (tr|Q1L6W3) DNA-directed RNA polymerase (Fragment) OS=Antirrhinum
majus GN=RPD2 PE=2 SV=1
Length = 821
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 102/165 (61%), Gaps = 14/165 (8%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V + RTGE V SLIFMGPTFYQ+L HMA DK+KF G P T Q V R + F
Sbjct: 664 ERVYDGRTGEKVESLIFMGPTFYQRLTHMAEDKIKFRNTGPVHPLTRQPVADR-KRFGGI 722
Query: 60 QVW*DGA*LPHSSRCICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSRK 113
+ C+ A +RL L+D+ C+N NVI+R+V RK
Sbjct: 723 KFG------EMERDCLIAHGAAANLHERLFTLSDSSQMHVCRKCQNMANVIQRSVFGGRK 776
Query: 114 IKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
I+ PYCR C+S +D V++N+PYGAK+LCQELFSMGISLKF+T+LC
Sbjct: 777 IRGPYCRFCDSVEDVVRLNVPYGAKLLCQELFSMGISLKFDTELC 821
>D7L3H4_ARALY (tr|D7L3H4) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_898915 PE=4 SV=1
Length = 505
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 100/166 (60%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N R+GEM+ SLIFMGPTFYQ+LVHM+ DKVKF G P T Q V R
Sbjct: 348 ERVYNGRSGEMMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQQVADRKRF---- 403
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSR 112
G R C+ + +RL L+D+ CK + NVIERT R
Sbjct: 404 ----GGIRFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGR 459
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYCR+C S+D V+V +PYGAK+LCQELFSMGI+L F+T+LC
Sbjct: 460 KIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 505
>Q67ZK6_ARATH (tr|Q67ZK6) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=At3g23780 PE=2 SV=1
Length = 639
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 101/165 (61%), Gaps = 14/165 (8%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N R+GEM+ S+IFMGPTFYQ+LVHM+ DKVKF G P T Q V R + F
Sbjct: 482 ERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADR-KRFGGI 540
Query: 60 QVW*DGA*LPHSSRCICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSRK 113
+ C+ + +RL L+D+ CK + NVIERT RK
Sbjct: 541 KFG------EMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGRK 594
Query: 114 IKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
I+ PYCR+C S+D V+V +PYGAK+LCQELFSMGI+L F+T+LC
Sbjct: 595 IRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTELC 639
>Q1ANE6_ARATH (tr|Q1ANE6) DNA-directed RNA polymerase (Fragment) OS=Arabidopsis
thaliana GN=RPD2b PE=2 SV=1
Length = 333
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 18/167 (10%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPE--AFW 57
E+V N R+GEM+ SLIFMGPTFYQ+LVHM+ +KVKF G P T Q V R
Sbjct: 176 ERVYNGRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVHPLTRQPVADRKRFGGIR 235
Query: 58 WYQVW*DGA*LPHSSRCICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQS 111
+ ++ D C+ + +RL L+D+ CK + NVIERT
Sbjct: 236 FGEMERD---------CLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSG 286
Query: 112 RKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
RKI+ PYCR+C S+D V+V +PYGAK+LCQELFSMGI+L F+T+LC
Sbjct: 287 RKIRGPYCRVCASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 333
>D7L7Z5_ARALY (tr|D7L7Z5) NRPD2a OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_898162 PE=4 SV=1
Length = 1169
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 100/166 (60%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N R+GEM+ SLIFMGPTFYQ+LVHM+ DKVKF G P T Q V +
Sbjct: 1012 ERVYNGRSGEMMRSLIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADKKRF---- 1067
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSR 112
G R C+ + +RL L+D+ CK + NVIERT R
Sbjct: 1068 ----GGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGR 1123
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYCR+C S+D V+V +PYGAK+LCQELFSMGI+L F+T+LC
Sbjct: 1124 KIRGPYCRVCASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1169
>Q9LK40_ARATH (tr|Q9LK40) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=NRPD2a PE=2 SV=1
Length = 1172
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 100/166 (60%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E+V N R+GEM+ S+IFMGPTFYQ+LVHM+ DKVKF G P T Q V R
Sbjct: 1015 ERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPLTRQPVADRKRF---- 1070
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQSR 112
G R C+ + +RL L+D+ CK + NVIERT R
Sbjct: 1071 ----GGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGR 1126
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYCR+C S+D V+V +PYGAK+LCQELFSMGI+L F+T+LC
Sbjct: 1127 KIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1172
>Q9LV32_ARATH (tr|Q9LV32) DNA-directed RNA polymerase OS=Arabidopsis thaliana
GN=At3g18090 PE=3 SV=1
Length = 1119
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 102/167 (61%), Gaps = 18/167 (10%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPE--AFW 57
E+V N R+GEM+ SLIFMGPTFYQ+LVHM+ +KVKF G P T Q V R
Sbjct: 962 ERVYNGRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVHPLTRQPVADRKRFGGIR 1021
Query: 58 WYQVW*DGA*LPHSSRCICKPA*ATFYSQRL--LADAYL----PDCKNFTNVIERTVPQS 111
+ ++ D C+ + +RL L+D+ CK + NVIERT
Sbjct: 1022 FGEMERD---------CLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSG 1072
Query: 112 RKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
RKI+ PYCR+C S+D V+V +PYGAK+LCQELFSMGI+L F+T+LC
Sbjct: 1073 RKIRGPYCRVCASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1119
>Q07DU9_MAIZE (tr|Q07DU9) DNA-directed RNA polymerase (Fragment) OS=Zea mays
GN=RPD2 PE=2 SV=1
Length = 1170
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 95/166 (57%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE V SL+FMGPTFYQ+L+HM+ DKVKF G P T Q V R
Sbjct: 1013 ENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRF---- 1068
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NV+ R+VP +
Sbjct: 1069 ----GGVKFGEMERDCLLAHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGGK 1124
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C+S+++ V++N+PYGAK+L QELFSMGI LKFETQ+C
Sbjct: 1125 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1170
>D2WKI0_MAIZE (tr|D2WKI0) DNA-directed RNA polymerase OS=Zea mays PE=2 SV=1
Length = 1229
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 96/169 (56%), Gaps = 22/169 (13%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE V SL+FMGPTFYQ+L+HM+ DKVKF G P T Q V R
Sbjct: 1072 ENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRF---- 1127
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD---------CKNFTNVIERTVP 109
G R C+ A +RL L D C+ NV+ R+VP
Sbjct: 1128 ----GGVKFGEMERDCLLAHGSAANLHERLF---LLSDFSQMHICQTCERVANVVMRSVP 1180
Query: 110 QSRKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
+KI+ PYC C+S+++ V++N+PYGAK+L QELFSMGI LKFETQ+C
Sbjct: 1181 GGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229
>Q7XTQ7_ORYSJ (tr|Q7XTQ7) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBb0079B02.6 PE=3 SV=2
Length = 1343
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE +HSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1186 ESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1241
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NVI R VP +
Sbjct: 1242 ----GGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1297
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C S+++ V++N+PYGAK+L QELFSMGI L+FET++C
Sbjct: 1298 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1343
>B8AV78_ORYSI (tr|B8AV78) DNA-directed RNA polymerase OS=Oryza sativa subsp. indica
GN=OsI_17620 PE=3 SV=1
Length = 1177
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE +HSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1020 ESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1075
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NVI R VP +
Sbjct: 1076 ----GGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1131
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C S+++ V++N+PYGAK+L QELFSMGI L+FET++C
Sbjct: 1132 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1177
>Q7F9D6_ORYSJ (tr|Q7F9D6) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OSJNBa0063C18.1 PE=3 SV=1
Length = 1316
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE +HSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1159 ESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1214
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NVI R VP +
Sbjct: 1215 ----GGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1270
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C S+++ V++N+PYGAK+L QELFSMGI L+FET++C
Sbjct: 1271 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1316
>B9FCT0_ORYSJ (tr|B9FCT0) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_16357 PE=3 SV=1
Length = 1185
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE +HSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1028 ESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1083
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NVI R VP +
Sbjct: 1084 ----GGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1139
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C S+++ V++N+PYGAK+L QELFSMGI L+FET++C
Sbjct: 1140 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1185
>Q259Y6_ORYSA (tr|Q259Y6) DNA-directed RNA polymerase OS=Oryza sativa GN=B0414F07.4
PE=3 SV=1
Length = 1343
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE +HSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1186 ESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1241
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NVI R VP +
Sbjct: 1242 ----GGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1297
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C S+++ V++N+PYGAK+L QELFSMGI L+FET++C
Sbjct: 1298 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1343
>D2WKH8_MAIZE (tr|D2WKH8) DNA-directed RNA polymerase OS=Zea mays PE=2 SV=1
Length = 1229
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 96/169 (56%), Gaps = 22/169 (13%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE V SL+FMGPTFYQ+L+HM+ DKVKF G P T Q V R
Sbjct: 1072 ENVLNGRTGERVQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRF---- 1127
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD---------CKNFTNVIERTVP 109
G R C+ A +RL L D C+ NV+ R+VP
Sbjct: 1128 ----GGVKFGEMERDCLLAHGSAANLHERLF---LLSDFSQMHICQTCERVANVVMRSVP 1180
Query: 110 QSRKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
+KI+ PYC C+S+++ V++N+PYGAK+L QELFSMGI LKFETQ+C
Sbjct: 1181 GGKKIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFETQVC 1229
>Q0J9N2_ORYSJ (tr|Q0J9N2) DNA-directed RNA polymerase (Fragment) OS=Oryza sativa
subsp. japonica GN=Os04g0641000 PE=3 SV=1
Length = 1270
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE +HSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1113 ESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRF---- 1168
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NVI R VP +
Sbjct: 1169 ----GGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGK 1224
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C S+++ V++N+PYGAK+L QELFSMGI L+FET++C
Sbjct: 1225 KIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC 1270
>C5Y8Y9_SORBI (tr|C5Y8Y9) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb06g030300 PE=3 SV=1
Length = 1239
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 95/166 (57%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE + SL+FMGPTFYQ+L+HM+ DKVKF G P T Q V R
Sbjct: 1082 ENVLNGRTGERMQSLVFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRF---- 1137
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NV+ R+VP +
Sbjct: 1138 ----GGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVPGGK 1193
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C+S+++ V++N+PYGAK+L QELFSMGI LKF+T++C
Sbjct: 1194 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFDTEVC 1239
>C5WRS0_SORBI (tr|C5WRS0) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb01g042100 PE=3 SV=1
Length = 1228
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE + SLIFMGPTFYQ+L+HM+ DKVKF G P T Q V R
Sbjct: 1071 ENVLNGRTGERMQSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRF---- 1126
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSR 112
G R C+ A +RL + C+ NV+ R+V +
Sbjct: 1127 ----GGVKFGEMERDCLLAHGSAANLHERLFMLSDFSQMHICQTCERVANVVMRSVSGGK 1182
Query: 113 KIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
KI+ PYC C+S+++ V++N+PYGAK+L QELFSMGI LKF+T++C
Sbjct: 1183 KIRGPYCGFCKSSENIVRINVPYGAKLLYQELFSMGICLKFDTEVC 1228
>C0HER7_MAIZE (tr|C0HER7) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 141
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 14/148 (9%)
Query: 18 MGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWYQVW*DGA*LPHSSRCIC 76
MGPTFYQ+L+HM+ DKVKF G P T Q V R + F + C+
Sbjct: 1 MGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADR-KRFGGVKFG------EMERDCLL 53
Query: 77 KPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQSRKIKAPYCRICESADDTVK 130
A +RL + C+ NV+ R+VP +KI+ PYC C+S+++ V+
Sbjct: 54 AHGSAANLHERLFLLSDFSQMHICQTCERVANVVMRSVPGGKKIRGPYCGFCKSSENIVR 113
Query: 131 VNLPYGAKVLCQELFSMGISLKFETQLC 158
+N+PYGAK+L QELFSMGI LKFETQ+C
Sbjct: 114 INVPYGAKLLYQELFSMGICLKFETQVC 141
>C5YHJ3_SORBI (tr|C5YHJ3) DNA-directed RNA polymerase OS=Sorghum bicolor
GN=Sb07g004600 PE=3 SV=1
Length = 1251
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 88/166 (53%), Gaps = 17/166 (10%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N +TGE + SL+FMGPTFYQ+LVHMA DKVKF G P T Q V +
Sbjct: 1093 ESVLNGQTGERMKSLVFMGPTFYQRLVHMAEDKVKFRNTGPVHPVTRQPVEDKKRF---- 1148
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD------CKNFTNVIERTVPQ-S 111
G R C+ A +RL + C+ NVI R S
Sbjct: 1149 ----GGVKFGEMERDCMLAHGAAANLHERLFTLSDFSQMHICQACQRVANVIMRPAEGGS 1204
Query: 112 RKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQL 157
+K+ PYC C SA+ V+VN+PYG+K+L QELF MGI LKF+T++
Sbjct: 1205 KKVHGPYCMFCRSAERIVRVNVPYGSKLLYQELFCMGICLKFDTEI 1250
>Q0J7Q4_ORYSJ (tr|Q0J7Q4) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=Os08g0171600 PE=3 SV=1
Length = 462
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 91/171 (53%), Gaps = 22/171 (12%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPE--AFW 57
E V N RTGE S +F GPTFYQ+L HMA DKVKF G P T Q V R
Sbjct: 301 ESVINGRTGERAASPVFTGPTFYQRLHHMAEDKVKFRNTGPVHPLTRQPVEDRRRYGGVK 360
Query: 58 WYQVW*DGA*LPHSSRCICKPA*ATFYSQRL--LAD-AYLPDCKN-------FTNVIERT 107
+ ++ D C+ A +RL L+D + L C+ + +
Sbjct: 361 FGEMERD---------CLLAHGAAANLHERLFLLSDVSRLHVCRRCQRAAVVVSPAVAAD 411
Query: 108 VPQSRKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
RK++ PYCR C SA++ V+V++PYGAK+L QELFSMGI LKF+T+L
Sbjct: 412 GGGGRKVRGPYCRFCRSAEEVVRVSVPYGAKILYQELFSMGICLKFDTELI 462
>Q6YYK5_ORYSJ (tr|Q6YYK5) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OJ1590_E05.24 PE=3 SV=1
Length = 1136
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE S +F GPTFYQ+L HMA DKVKF G P T Q V R
Sbjct: 975 ESVINGRTGERAASPVFTGPTFYQRLHHMAEDKVKFRNTGPVHPLTRQPVEDRRRY---- 1030
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LAD-AYLPDCKN-------FTNVIERTV 108
G R C+ A +RL L+D + L C+ + +
Sbjct: 1031 ----GGVKFGEMERDCLLAHGAAANLHERLFLLSDVSRLHVCRRCQRAAVVVSPAVAADG 1086
Query: 109 PQSRKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQL 157
RK++ PYCR C SA++ V+V++PYGAK+L QELFSMGI LKF+T+L
Sbjct: 1087 GGGRKVRGPYCRFCRSAEEVVRVSVPYGAKILYQELFSMGICLKFDTEL 1135
>A3BQ32_ORYSJ (tr|A3BQ32) DNA-directed RNA polymerase OS=Oryza sativa subsp.
japonica GN=OsJ_26208 PE=3 SV=1
Length = 1257
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E V N RTGE S +F GPTFYQ+L HMA DKVKF G P T Q V R
Sbjct: 1096 ESVINGRTGERAASPVFTGPTFYQRLHHMAEDKVKFRNTGPVHPLTRQPVEDRRRY---- 1151
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRL--LAD-AYLPDCKN-------FTNVIERTV 108
G R C+ A +RL L+D + L C+ + +
Sbjct: 1152 ----GGVKFGEMERDCLLAHGAAANLHERLFLLSDVSRLHVCRRCQRAAVVVSPAVAADG 1207
Query: 109 PQSRKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQL 157
RK++ PYCR C SA++ V+V++PYGAK+L QELFSMGI LKF+T+L
Sbjct: 1208 GGGRKVRGPYCRFCRSAEEVVRVSVPYGAKILYQELFSMGICLKFDTEL 1256
>Q1L6W2_GINBI (tr|Q1L6W2) DNA-directed RNA polymerase (Fragment) OS=Ginkgo biloba
GN=RPD2 PE=2 SV=1
Length = 651
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 27/169 (15%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCRPEAFWWY 59
E++ N RTG + S IF+GPT+YQ+L+HMA DK+K+ HG P T Q V R
Sbjct: 499 EQMYNGRTGCKLQSKIFIGPTYYQRLIHMAEDKMKYRNHGPVHPLTRQPVADRKRH---- 554
Query: 60 QVW*DGA*LPHSSR-CICKPA*ATFYSQRLLADAYLPD---------CKNFTNVIERTVP 109
G R C+ +RL +L D C+N VI R
Sbjct: 555 ----GGVKFGEMERDCMLAHGATANLLERLF---FLSDFSTMHVCRECRNMATVILRD-- 605
Query: 110 QSRKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQLC 158
++ PYC C++A VKVN+PY K+L QELFS+G+ L+F+T+LC
Sbjct: 606 ---GVRGPYCPFCKTAKHIVKVNVPYACKMLYQELFSIGMCLRFQTELC 651
>Q1L6V6_SOLLC (tr|Q1L6V6) DNA-directed RNA polymerase (Fragment) OS=Solanum
lycopersicum GN=RPD2 PE=2 SV=1
Length = 1123
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCR 52
E+V N RTGEMVHSLIFMGPTFYQ+L+HMA DKVKF G P T Q V R
Sbjct: 1055 ERVYNGRTGEMVHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADR 1107
>A2YRP1_ORYSI (tr|A2YRP1) DNA-directed RNA polymerase OS=Oryza sativa subsp. indica
GN=OsI_27986 PE=3 SV=1
Length = 1347
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 40/47 (85%)
Query: 111 SRKIKAPYCRICESADDTVKVNLPYGAKVLCQELFSMGISLKFETQL 157
RK++ PYCR C SA++ V+V++PYGAK+L QELFSMGI LKF+T+L
Sbjct: 1300 GRKVRGPYCRFCRSAEEVVRVSVPYGAKILYQELFSMGICLKFDTEL 1346
>Q1L6W0_9TRAC (tr|Q1L6W0) DNA-directed RNA polymerase (Fragment) OS=Lycopodium
sp. JL-2005 GN=RPD2 PE=2 SV=1
Length = 510
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 3 VCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGAC-PSTYQAVCCR 52
+CN RTG M+ + IFMGPTFYQ+L+HMA DK+K+ + G P + Q V R
Sbjct: 444 MCNGRTGHMLKARIFMGPTFYQRLIHMAQDKLKWRRTGPVHPLSRQPVADR 494
>C5Y5J9_SORBI (tr|C5Y5J9) Putative uncharacterized protein Sb05g004163
(Fragment) OS=Sorghum bicolor GN=Sb05g004163 PE=3 SV=1
Length = 79
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 1 EKVCNDRTGEMVHSLIFMGPTFYQQLVHMA*DKVKFTQHGACP 43
E + N RTGE + SL+FM PTFYQ+L+HM+ DKVKF H P
Sbjct: 6 ENILNGRTGERMQSLVFMDPTFYQRLIHMSEDKVKF--HNTEP 46