Jatropha Genome Database

JcCB0229021.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229021.10 + phase: 0 /pseudo/partial
         (307 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9IGA5_POPTR (tr|B9IGA5) Predicted protein OS=Populus trichocarp...   194   1e-47
D7SY19_VITVI (tr|D7SY19) Whole genome shotgun sequence of line P...   106   4e-21
A5AIA9_VITVI (tr|A5AIA9) Putative uncharacterized protein OS=Vit...   103   3e-20
A5BAL1_VITVI (tr|A5BAL1) Putative uncharacterized protein OS=Vit...    80   3e-13
B9HP29_POPTR (tr|B9HP29) Predicted protein OS=Populus trichocarp...    77   3e-12
B9SI37_RICCO (tr|B9SI37) Putative uncharacterized protein OS=Ric...    70   3e-10
Q9M035_ARATH (tr|Q9M035) At5g01370 OS=Arabidopsis thaliana GN=T1...    58   1e-06
D7M730_ARALY (tr|D7M730) Putative uncharacterized protein OS=Ara...    56   6e-06

>B9IGA5_POPTR (tr|B9IGA5) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_825349 PE=4 SV=1
          Length = 429

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/248 (48%), Positives = 158/248 (63%), Gaps = 30/248 (12%)

Query: 44  RLMGLDSLPDTNRIP---TNGNTVTRSRSVNFMDYLFEFDLSQAHHRRVKTSLSFRDVPT 100
           RLMGLDSLPDTNR+P   +N  +VTRSRSVNFMDYL + DL+QA HRRV+TS+SFR+VP 
Sbjct: 70  RLMGLDSLPDTNRVPRGRSNPESVTRSRSVNFMDYLLQLDLAQAQHRRVRTSVSFREVPA 129

Query: 101 LQNQKNNDFFLLYLDNIEKTKKTRPNKFRKAEV----------GLEESNKKEE-----KG 145
           L NQ+N+D ++LYLD+ +K  K   +K RK+E             EE +K +E     +G
Sbjct: 130 LMNQENHDVYVLYLDDQDKKPKKMGSKQRKSEGISFGDQMKQKNYEERSKNKEGIVTREG 189

Query: 146 AVDVRKEKKNQRNNNLKISKLKDEPRKQVMHDNKQFSRPGSCKGGQVSSGFVSPKK---- 201
           AV   K +KN+ NNN+K+S  K+EP++  +  ++QFS  G+C G Q SSGFV P K    
Sbjct: 190 AV---KTEKNRHNNNMKVSTSKNEPKR--VSSSRQFSSVGNCDGVQFSSGFVMPHKKDVC 244

Query: 202 VKDRRVPKGKSKCAVKPINQKEVLVESKLMKKIKKQRAMKDLQCYSECXXXXXXXXXXXX 261
            K R  P+ +S    KP+NQKEVLVESK MK+IKK++A KD Q  S+C            
Sbjct: 245 RKSRENPRARSPVK-KPVNQKEVLVESKFMKRIKKRQAYKDSQ--SDCSSEDSSTISIFG 301

Query: 262 XXEFPIYD 269
             EF  +D
Sbjct: 302 LSEFLAHD 309


>D7SY19_VITVI (tr|D7SY19) Whole genome shotgun sequence of line PN40024,
           scaffold_105.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00011170001 PE=4 SV=1
          Length = 408

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 129/237 (54%), Gaps = 26/237 (10%)

Query: 44  RLMGLDSLPDTNRIPTNG--NTVTRSRSVNFMDYLFEFDLSQA-HHRRVKTSLSFRDVPT 100
           RLMGLDSLP+ N +P     N++TRS S+NFMDY  E D +Q   HRRV+TS+SFR+VPT
Sbjct: 67  RLMGLDSLPERNWVPRAAALNSITRSMSLNFMDYFPEVDPAQGGQHRRVRTSVSFREVPT 126

Query: 101 LQNQKNNDFFLLYLDNIEKTKKTRPNKFRKAEVGLEE-SNKKEEKG-AVDVRKE-----K 153
             +Q+N+D F+L+LDN+ +  +  P+  RK+E+   E   KKEE+  + D  KE     K
Sbjct: 127 SLHQQNHDCFVLFLDNVGEAGEMGPH-MRKSEMRFPELKQKKEERSKSKDNSKEKALVKK 185

Query: 154 KNQRNNNLKISKLKDEPRKQVMHDNKQFSRPGSCKGGQVSSGFVSPKKVKDRRVPK-GKS 212
           +    N+ +  K K+EP++      K  S+ G+C G +  SG V  +K KD  VP   K 
Sbjct: 186 RESGENSKRACKGKNEPKRV---SGKLSSKLGTCYGVE-DSGSVLLQKKKD--VPATSKV 239

Query: 213 KCAVKPINQKEVLVESKLM-KKIKKQRAMKDLQCYSECXXXXXXXXXXXXXXEFPIY 268
           K  V     +E  V SK   KK K QR +  ++   EC               FP++
Sbjct: 240 KSPV-----REASVGSKFTKKKDKGQRGVNKVE--PECDSENSSPVSVLDHYGFPVH 289


>A5AIA9_VITVI (tr|A5AIA9) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_040343 PE=4 SV=1
          Length = 370

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 128/237 (54%), Gaps = 26/237 (10%)

Query: 44  RLMGLDSLPDTNRIPTNG--NTVTRSRSVNFMDYLFEFDLSQA-HHRRVKTSLSFRDVPT 100
           RLMGLDSLP+ N +P     N++TRS S+NFMDY  E D +Q   HRRV+TS+SFR+VPT
Sbjct: 67  RLMGLDSLPERNWVPRAAALNSITRSMSLNFMDYFPEVDPAQGGQHRRVRTSVSFREVPT 126

Query: 101 LQNQKNNDFFLLYLDNIEKTKKTRPNKFRKAEVGLEE-SNKKEEKG-AVDVRKE-----K 153
             +Q+N+D F+L+L N+ +  +  P+  RK+E+   E   KKEE+  + D  KE     K
Sbjct: 127 SLHQQNHDCFVLFLXNVGEAGEMGPH-MRKSEMRFPELKQKKEERSKSKDNSKEKALVKK 185

Query: 154 KNQRNNNLKISKLKDEPRKQVMHDNKQFSRPGSCKGGQVSSGFVSPKKVKDRRVPK-GKS 212
           +    N+ +  K K+EP++      K  S+ G+C G +  SG V  +K KD  VP   K 
Sbjct: 186 RESGENSKRACKGKNEPKRV---SGKLSSKLGTCYGVE-DSGSVLLQKKKD--VPATSKV 239

Query: 213 KCAVKPINQKEVLVESKLM-KKIKKQRAMKDLQCYSECXXXXXXXXXXXXXXEFPIY 268
           K  V     +E  V SK   KK K QR +  ++   EC               FP++
Sbjct: 240 KSPV-----REASVGSKFTKKKDKGQRGVNKVE--PECDSENSSPVSVLDHYGFPVH 289


>A5BAL1_VITVI (tr|A5BAL1) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_006555 PE=4 SV=1
          Length = 458

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 3/93 (3%)

Query: 44  RLMGLDSLPDTNRIPTN--GNTVTRSRSVNFMDYLFEFDLSQAHHRRVKTSLSFRDVPTL 101
           RLMGLDS+P+ N + +   GN++ RSRS+N MD   + +  Q  HRRVK+SLSFR+ P  
Sbjct: 64  RLMGLDSMPEINLVCSQIKGNSIVRSRSMNSMDCWPDSEAMQGKHRRVKSSLSFRETPVF 123

Query: 102 QNQKNNDFFLLYLDNIEKTKKTRPNKFRKAEVG 134
              +N ++ LL   N  +TKK R  K RK E+G
Sbjct: 124 FEMENEEYLLLSFGNEGETKKLR-QKERKCEMG 155


>B9HP29_POPTR (tr|B9HP29) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_768063 PE=4 SV=1
          Length = 443

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 61/93 (65%), Gaps = 2/93 (2%)

Query: 44  RLMGLDSLPDTNRIP--TNGNTVTRSRSVNFMDYLFEFDLSQAHHRRVKTSLSFRDVPTL 101
           RLMGL+S P+T+ +    + N+++RSRS+N +++  E D  Q  HRRV ++LSFR++PT 
Sbjct: 87  RLMGLESFPETSSVDMRISANSISRSRSMNSVEFRGESDQMQGQHRRVNSTLSFREMPTF 146

Query: 102 QNQKNNDFFLLYLDNIEKTKKTRPNKFRKAEVG 134
              +N ++F+L  +NI    K   +K RK +VG
Sbjct: 147 LEVENKEYFVLSFENIGSESKRVRSKERKCDVG 179


>B9SI37_RICCO (tr|B9SI37) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0612600 PE=4 SV=1
          Length = 440

 Score = 69.7 bits (169), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 15/117 (12%)

Query: 44  RLMGLDSLPDTNRIPTNGNTVTRSRSVNFMDYLFEFDLSQAHHRRVKTSLSFRDVPTLQN 103
           RLMGL SLPD         +V R+RS+N  ++  E D  + HHRRVK SLSF ++PT+  
Sbjct: 90  RLMGLQSLPDY------ATSVPRTRSLNSAEFPDEIDQMKGHHRRVK-SLSFHEMPTILE 142

Query: 104 QKNNDFFLLYLDNIEKTKKTRPNKFRKAEVGLEESNKKEEKGAVDVRKEKKNQRNNN 160
            +N  FF+L  +     KKTR +K +K+EVG  E  ++        R++ KN+ N N
Sbjct: 143 LENEQFFVLSFEKRGDDKKTR-SKEKKSEVGFGECRERR-------REKSKNKENGN 191


>Q9M035_ARATH (tr|Q9M035) At5g01370 OS=Arabidopsis thaliana GN=T10O8_80 PE=1 SV=1
          Length = 427

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 25/151 (16%)

Query: 44  RLMGLDS-LPDTNRI---PTNGNTVTRSRSVNFMDYLFEFDL----------SQAHHRRV 89
           +LMGLD   P + R      +G+ VTRS+SVNFMDY+ +              Q   RRV
Sbjct: 83  KLMGLDHPAPGSKRFRYFDDSGSAVTRSKSVNFMDYILKGHEEEEENEDEKDGQRQCRRV 142

Query: 90  KTSLSFRD-VPTL------QNQKNNDFFLLYLDNIEKTKKTRPNKFRKAEVGLEESNKKE 142
           K S+SFR+ VPT         QK +DF LLYLD +++ ++   +         E+  +  
Sbjct: 143 KASVSFREIVPTSARWSSNNQQKKHDFLLLYLDKLDEKRELVGSSSFSRSKRFEKVVEDS 202

Query: 143 EKGAVDVRKEKKNQRNNNLKIS-KLKDEPRK 172
           +K  +     KK +   N K++ K KDEPRK
Sbjct: 203 KKPPLPPSAPKKKE---NEKVAKKFKDEPRK 230


>D7M730_ARALY (tr|D7M730) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_908018 PE=4 SV=1
          Length = 427

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 21/100 (21%)

Query: 44  RLMGLDS-LPDTNRI---PTNGNTVTRSRSVNFMDYLFEFDL----------SQAHHRRV 89
           +LMGLD   P + R      +G+ VTRS+SVNFMDY+                Q   RRV
Sbjct: 84  KLMGLDHPAPGSKRFRYFDDSGSAVTRSKSVNFMDYILRGHEEEEEDEDEKDGQRQCRRV 143

Query: 90  KTSLSFRD-VPTL------QNQKNNDFFLLYLDNIEKTKK 122
           K S+SFR+ VPT         QK +DF LLYLD +++ ++
Sbjct: 144 KASVSFREIVPTSARWSSNNQQKKHDFLLLYLDKLDEKRE 183