Jatropha Genome Database

JcCB0213661.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0213661.10 + phase: 0 /partial
         (125 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SKJ8_RICCO (tr|B9SKJ8) Metal ion binding protein, putative OS=...   135   2e-30
B9IB38_POPTR (tr|B9IB38) Predicted protein OS=Populus trichocarp...   101   2e-20
D7KCZ1_ARALY (tr|D7KCZ1) Putative uncharacterized protein OS=Ara...    68   2e-10
A5C093_VITVI (tr|A5C093) Putative uncharacterized protein (Fragm...    68   3e-10
D7U5S6_VITVI (tr|D7U5S6) Whole genome shotgun sequence of line P...    67   7e-10
Q9SHQ8_ARATH (tr|Q9SHQ8) F1K23.4 OS=Arabidopsis thaliana GN=At1g...    65   3e-09

>B9SKJ8_RICCO (tr|B9SKJ8) Metal ion binding protein, putative OS=Ricinus communis
           GN=RCOM_0659680 PE=4 SV=1
          Length = 249

 Score =  135 bits (339), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/127 (55%), Positives = 80/127 (62%), Gaps = 2/127 (1%)

Query: 1   SDLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNAXXXXXXXXXXXX 60
           +DL   LLKH+GI++VKT++KTQ L V+G IESDKLLAYIRKKVH+NA            
Sbjct: 123 NDLQNRLLKHEGIYSVKTNMKTQTLLVQGIIESDKLLAYIRKKVHKNAEIITSKPEKMEE 182

Query: 61  XXXXXXXXXXXXXXXXXXX--XXXXIEFKAEKKVEAITKEGNAPYFVHYVYAPQLFSDEN 118
                                    +EFK EKKV A T EGNAPYF+HYVYAPQLFSDEN
Sbjct: 183 KKEVKEAEIKEKQQVEAISINSTKLVEFKTEKKVAAQTTEGNAPYFIHYVYAPQLFSDEN 242

Query: 119 PNACIIM 125
           PNACIIM
Sbjct: 243 PNACIIM 249


>B9IB38_POPTR (tr|B9IB38) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_807730 PE=4 SV=1
          Length = 260

 Score =  101 bits (252), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 75/148 (50%), Gaps = 24/148 (16%)

Query: 2   DLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNAX---------XXX 52
           DL + LLKH+ I++VKTD+K Q +TV+GT+E DKL+AY+RKKVH+NA             
Sbjct: 113 DLRDKLLKHRSIYSVKTDMKAQTITVDGTMEGDKLVAYMRKKVHKNAEIIPPKSEKMEEK 172

Query: 53  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEFKAEKKVEAITKEGNAPYFVH------ 106
                                          +EFKAEK VE  T E  APY V+      
Sbjct: 173 KEKPKVEAKPKEEKAEMVEFKAEKKEEKAEMVEFKAEKTVEVKTTERVAPYVVNYVYAPQ 232

Query: 107 ---------YVYAPQLFSDENPNACIIM 125
                    YVYAPQLFSDENP+AC IM
Sbjct: 233 FFSGENPHDYVYAPQLFSDENPHACFIM 260


>D7KCZ1_ARALY (tr|D7KCZ1) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_336004 PE=4 SV=1
          Length = 279

 Score = 68.2 bits (165), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 35/43 (81%), Gaps = 1/43 (2%)

Query: 84  IEFKAEKKVEAIT-KEGNAPYFVHYVYAPQLFSDENPNACIIM 125
           +EFK + KVE    K+GN PYFVHYVYAPQLFSDENPNAC I+
Sbjct: 237 VEFKEKVKVEGQKDKDGNIPYFVHYVYAPQLFSDENPNACCIV 279



 Score = 60.8 bits (146), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 36/47 (76%)

Query: 2   DLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNA 48
           DL   LLKHK I  VKTD K Q LTV+GTI++ KLL YI+KKVH++A
Sbjct: 130 DLQHKLLKHKAIHIVKTDTKAQTLTVQGTIDTAKLLTYIKKKVHKHA 176


>A5C093_VITVI (tr|A5C093) Putative uncharacterized protein (Fragment) OS=Vitis
           vinifera GN=VITISV_013619 PE=4 SV=1
          Length = 330

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 2   DLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNAXXXXXXXXXXXXX 61
           DL   LL+   I++VKTD+K Q LTVEGT+ESDKL+ YIRKKVH++A             
Sbjct: 233 DLRRKLLRRTDIYSVKTDMKAQKLTVEGTVESDKLIGYIRKKVHKHA------EIIAPKP 286

Query: 62  XXXXXXXXXXXXXXXXXXXXXXIEFKAEKKVEAITKEGNAPYFVHYVY 109
                                 +EF   K     TK  N PYF+H  Y
Sbjct: 287 EKEEEKKEDVKVEQISITTTQTVEFMEXKS----TKVDNVPYFIHXAY 330


>D7U5S6_VITVI (tr|D7U5S6) Whole genome shotgun sequence of line PN40024,
           scaffold_45.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00026762001 PE=4 SV=1
          Length = 222

 Score = 66.6 bits (161), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 38/47 (80%)

Query: 2   DLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNA 48
           DL   LL+   I++VKTD+K Q LTVEGT+ESDKL+ YIRKKVH++A
Sbjct: 126 DLRRKLLRRTDIYSVKTDMKAQKLTVEGTVESDKLIGYIRKKVHKHA 172


>Q9SHQ8_ARATH (tr|Q9SHQ8) F1K23.4 OS=Arabidopsis thaliana GN=At1g29000 PE=4 SV=2
          Length = 287

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/47 (70%), Positives = 37/47 (78%)

Query: 2   DLHEWLLKHKGIFNVKTDIKTQNLTVEGTIESDKLLAYIRKKVHRNA 48
           DL   LLKHK I  VKTD K Q LTV+GTIES KLLAYI+KKVH++A
Sbjct: 129 DLQHKLLKHKAIHIVKTDTKAQTLTVQGTIESAKLLAYIKKKVHKHA 175



 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 1/43 (2%)

Query: 84  IEFKAEKKVEAIT-KEGNAPYFVHYVYAPQLFSDENPNACIIM 125
           +E+K   KVE    K+GN PYFVHYVYAPQLFSDENPNAC I+
Sbjct: 245 VEYKEIVKVEGQKDKDGNIPYFVHYVYAPQLFSDENPNACRIV 287