Jatropha Genome Database

JcCB0174101.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0174101.10 - phase: 0 
         (131 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SXF0_RICCO (tr|B9SXF0) RNA splicing protein mrs2, mitochondria...   117   3e-25
D7LW91_ARALY (tr|D7LW91) Putative uncharacterized protein OS=Ara...    88   3e-16
D7SZR9_VITVI (tr|D7SZR9) Whole genome shotgun sequence of line P...    86   1e-15
A9S8J2_PHYPA (tr|A9S8J2) Predicted protein OS=Physcomitrella pat...    82   3e-14
D5AAV9_PICSI (tr|D5AAV9) Putative uncharacterized protein OS=Pic...    78   4e-13
C5WTI0_SORBI (tr|C5WTI0) Putative uncharacterized protein Sb01g0...    76   1e-12
A9RC07_PHYPA (tr|A9RC07) Predicted protein OS=Physcomitrella pat...    75   2e-12
B4FD29_MAIZE (tr|B4FD29) Putative uncharacterized protein OS=Zea...    74   7e-12
B4FQF3_MAIZE (tr|B4FQF3) Putative uncharacterized protein OS=Zea...    73   1e-11
A9U227_PHYPA (tr|A9U227) Predicted protein OS=Physcomitrella pat...    72   2e-11
A2Q376_MEDTR (tr|A2Q376) Putative uncharacterized protein OS=Med...    67   5e-10
B4FB43_MAIZE (tr|B4FB43) Putative uncharacterized protein OS=Zea...    64   4e-09
B8LMA9_PICSI (tr|B8LMA9) Putative uncharacterized protein OS=Pic...    64   5e-09
D7LQJ7_ARALY (tr|D7LQJ7) Putative uncharacterized protein OS=Ara...    63   1e-08
A5AVP9_VITVI (tr|A5AVP9) Putative uncharacterized protein OS=Vit...    63   1e-08
B9N9X1_POPTR (tr|B9N9X1) Magnesium transporter OS=Populus tricho...    62   2e-08
D7KDM1_ARALY (tr|D7KDM1) Putative uncharacterized protein OS=Ara...    62   3e-08
A9U449_PHYPA (tr|A9U449) Predicted protein OS=Physcomitrella pat...    62   3e-08
A9U1P2_PHYPA (tr|A9U1P2) Predicted protein OS=Physcomitrella pat...    62   3e-08
D7KWM2_ARALY (tr|D7KWM2) Putative uncharacterized protein OS=Ara...    61   3e-08
B9GVM0_POPTR (tr|B9GVM0) Magnesium transporter OS=Populus tricho...    61   4e-08
B9HIE8_POPTR (tr|B9HIE8) Magnesium transporter OS=Populus tricho...    61   5e-08
B9RGM7_RICCO (tr|B9RGM7) RNA splicing protein mrs2, mitochondria...    60   7e-08
B9RED4_RICCO (tr|B9RED4) RNA splicing protein mrs2, mitochondria...    60   9e-08
B9HXJ2_POPTR (tr|B9HXJ2) Magnesium transporter OS=Populus tricho...    60   1e-07
Q3LVP2_TAROF (tr|Q3LVP2) TO36-3rc (Fragment) OS=Taraxacum offici...    57   7e-07
B8LQE7_PICSI (tr|B8LQE7) Putative uncharacterized protein OS=Pic...    56   1e-06

>B9SXF0_RICCO (tr|B9SXF0) RNA splicing protein mrs2, mitochondrial, putative
           OS=Ricinus communis GN=RCOM_0320810 PE=4 SV=1
          Length = 453

 Score =  117 bits (294), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 65/124 (52%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 1   MGRGSCIFSKTNKRRLKKKSGXXXXXXXXXXXXXXXXXXXXXXQQLIDGSGNTNNNSLIX 60
           MGRGS  FSK+ +RRLKKKSG                      QQL++ + N N+++LI 
Sbjct: 1   MGRGSFFFSKSTRRRLKKKSGPPSPPTPAPPPPPPFGAASPPQQQLVEAN-NINSSNLIV 59

Query: 61  XXXXXXXXXXXXXXRLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNI 120
                         RLWMRFD+ GNSELMECDKS IIKRV+IPARDLRILGP+FSHSSNI
Sbjct: 60  GKVVKKKAGGA---RLWMRFDRLGNSELMECDKSVIIKRVSIPARDLRILGPLFSHSSNI 116

Query: 121 LGKD 124
           L ++
Sbjct: 117 LARE 120


>D7LW91_ARALY (tr|D7LW91) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_907386 PE=4 SV=1
          Length = 436

 Score = 88.2 bits (217), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 44/50 (88%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R WMRFD+ G  E++ECDKSTIIKR ++PARDLRILGPVFSHSSNIL ++
Sbjct: 63  RWWMRFDRTGAMEVVECDKSTIIKRASVPARDLRILGPVFSHSSNILARE 112


>D7SZR9_VITVI (tr|D7SZR9) Whole genome shotgun sequence of line PN40024,
           scaffold_34.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00022826001 PE=4 SV=1
          Length = 379

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/47 (80%), Positives = 43/47 (91%)

Query: 78  MRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           MRFD+ G SEL+ECDKSTII+R AIPARDLRILGPVFSHSSNIL ++
Sbjct: 1   MRFDRCGQSELLECDKSTIIRRAAIPARDLRILGPVFSHSSNILARE 47


>A9S8J2_PHYPA (tr|A9S8J2) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_182353 PE=4 SV=1
          Length = 426

 Score = 81.6 bits (200), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/51 (62%), Positives = 43/51 (84%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDH 125
           R WMRFD  GNSE+ ECDK+ ++KRV +PARDLRI+GP+FS SS+IL +++
Sbjct: 44  RTWMRFDATGNSEIFECDKNDLLKRVTVPARDLRIMGPIFSQSSHILAREN 94


>D5AAV9_PICSI (tr|D5AAV9) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 233

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 34/47 (72%), Positives = 41/47 (87%)

Query: 78  MRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           MRFD  GNSE++ECDK TI+KRV+IP RDLRILGP+FS SSNIL ++
Sbjct: 1   MRFDVAGNSEVLECDKQTIMKRVSIPKRDLRILGPLFSQSSNILARE 47


>C5WTI0_SORBI (tr|C5WTI0) Putative uncharacterized protein Sb01g030170 OS=Sorghum
           bicolor GN=Sb01g030170 PE=4 SV=1
          Length = 478

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 42/50 (84%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           RLWMR D++G SE++E DK++II+R  +P RDLRILGPVFS SS+IL ++
Sbjct: 95  RLWMRLDRWGTSEVVELDKASIIRRAGLPPRDLRILGPVFSRSSSILARE 144


>A9RC07_PHYPA (tr|A9RC07) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_111091 PE=4 SV=1
          Length = 405

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 43/51 (84%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDH 125
           + WM+FD  GNSE+ +CD++ ++KRV +PARDLRILGP+FS SS+IL +++
Sbjct: 24  KTWMQFDASGNSEIFDCDRNGLLKRVTVPARDLRILGPIFSKSSHILAREN 74


>B4FD29_MAIZE (tr|B4FD29) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 188

 Score = 73.6 bits (179), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 31/49 (63%), Positives = 41/49 (83%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGK 123
           RLWMR D++  SE++E DK++II+R  +P RDLRILGPVFS SS+ILG+
Sbjct: 93  RLWMRLDRWSASEIVELDKASIIRRAGLPPRDLRILGPVFSRSSSILGE 141


>B4FQF3_MAIZE (tr|B4FQF3) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 469

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/50 (60%), Positives = 41/50 (82%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           RLWMR D++  SE++E DK++II+R  +P RDLRILGPVFS SS+IL ++
Sbjct: 93  RLWMRLDRWSASEIVELDKASIIRRAGLPPRDLRILGPVFSRSSSILARE 142


>A9U227_PHYPA (tr|A9U227) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_154555 PE=4 SV=1
          Length = 367

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 43/51 (84%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDH 125
           R WMRFD  GNSE+ +CD++ ++KRV++ ARDLRILGP+FS SS+IL +++
Sbjct: 4   RTWMRFDAIGNSEIFDCDRNGLLKRVSVLARDLRILGPMFSRSSHILAREN 54


>A2Q376_MEDTR (tr|A2Q376) Putative uncharacterized protein OS=Medicago truncatula
           GN=MtrDRAFT_AC155282g54v2 PE=4 SV=1
          Length = 86

 Score = 67.4 bits (163), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 78  MRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNIL 121
           MRFD+FG  EL+E +K+TII   AIPARDL+ILG VFSHSSNIL
Sbjct: 1   MRFDRFGKYELVEWEKNTIICHAAIPARDLKILGHVFSHSSNIL 44


>B4FB43_MAIZE (tr|B4FB43) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
          Length = 374

 Score = 64.3 bits (155), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 38/47 (80%)

Query: 78  MRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           MR D++  SE++E DK++II+R  +P RDLRILGPVFS SS+IL ++
Sbjct: 1   MRLDRWSASEIVELDKASIIRRAGLPPRDLRILGPVFSRSSSILARE 47


>B8LMA9_PICSI (tr|B8LMA9) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 467

 Score = 63.9 bits (154), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/50 (54%), Positives = 39/50 (78%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R DK G+S+++E DK TI+KR  +PARDLR+L P+F + S ILG++
Sbjct: 49  RSWIRIDKNGSSQVLEVDKLTIMKRCDLPARDLRLLDPLFVYPSTILGRE 98


>D7LQJ7_ARALY (tr|D7LQJ7) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_904644 PE=4 SV=1
          Length = 421

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 41/50 (82%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W++ D+ GNS ++E DK+TI+KR ++P+RDLR+L P+F + S+ILG++
Sbjct: 49  RSWVKIDQDGNSAVLELDKATIMKRCSLPSRDLRLLDPLFIYPSSILGRE 98


>A5AVP9_VITVI (tr|A5AVP9) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_001335 PE=4 SV=1
          Length = 559

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 38/50 (76%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R D  GNS+++E DK T+++R  +PARDLR+L P+F + S ILG++
Sbjct: 50  RSWIRVDASGNSQIIEVDKFTVMRRCDLPARDLRLLDPLFVYPSTILGRE 99


>B9N9X1_POPTR (tr|B9N9X1) Magnesium transporter OS=Populus trichocarpa
           GN=POPTRDRAFT_587197 PE=4 SV=1
          Length = 443

 Score = 61.6 bits (148), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 38/50 (76%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R D  GNS+++E DK T+++R  +PARDLR+L P+F + S ILG++
Sbjct: 50  RSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 99


>D7KDM1_ARALY (tr|D7KDM1) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_471800 PE=4 SV=1
          Length = 443

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 38/50 (76%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R D  GN+++ME DK T+++R  +PARDLR+L P+F + S ILG++
Sbjct: 51  RSWIRVDTSGNTQVMEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 100


>A9U449_PHYPA (tr|A9U449) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_101699 PE=4 SV=1
          Length = 419

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 39/50 (78%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R D  GN++++E DK+++++R  +PARDLR+L P+F + S ILG++
Sbjct: 14  RSWIRIDPSGNTQILEVDKASLMRRCDLPARDLRLLDPLFVYPSTILGRE 63


>A9U1P2_PHYPA (tr|A9U1P2) Predicted protein OS=Physcomitrella patens subsp.
           patens GN=PHYPADRAFT_227489 PE=4 SV=1
          Length = 451

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 39/50 (78%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R D  GN++++E DK+++++R  +PARDLR+L P+F + S ILG++
Sbjct: 51  RSWIRIDPSGNTQILEVDKASLMRRCDLPARDLRLLDPLFVYPSTILGRE 100


>D7KWM2_ARALY (tr|D7KWM2) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_895892 PE=4 SV=1
          Length = 443

 Score = 61.2 bits (147), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 37/48 (77%)

Query: 77  WMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           W+R D F NS+++E DK T+++R  +PARDLR+L P+F + S ILG++
Sbjct: 53  WIRVDTFANSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 100


>B9GVM0_POPTR (tr|B9GVM0) Magnesium transporter OS=Populus trichocarpa
           GN=POPTRDRAFT_554895 PE=4 SV=1
          Length = 443

 Score = 61.2 bits (147), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 38/50 (76%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R D  GNS+++E DK T+++R  +PARDLR+L P+F + S ILG++
Sbjct: 50  RSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 99


>B9HIE8_POPTR (tr|B9HIE8) Magnesium transporter OS=Populus trichocarpa
           GN=POPTRDRAFT_564302 PE=4 SV=1
          Length = 419

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 40/50 (80%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W++ D+ GNS+++E DK+TI++  ++P+RDLR+L P+F + S ILG++
Sbjct: 50  RSWIKIDQDGNSKILELDKATIMRHCSLPSRDLRLLDPLFIYPSTILGRE 99


>B9RGM7_RICCO (tr|B9RGM7) RNA splicing protein mrs2, mitochondrial, putative
           OS=Ricinus communis GN=RCOM_1442120 PE=4 SV=1
          Length = 447

 Score = 60.1 bits (144), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 38/50 (76%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+R D  GNS+++E DK T+++R  +PARDLR+L P+F + S ILG++
Sbjct: 50  RSWIRVDLSGNSQVIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 99


>B9RED4_RICCO (tr|B9RED4) RNA splicing protein mrs2, mitochondrial, putative
           OS=Ricinus communis GN=RCOM_1620560 PE=4 SV=1
          Length = 460

 Score = 59.7 bits (143), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 39/50 (78%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W++ D+ G+ E++E DK+TI++  ++PARDLR+L P+F + S ILG++
Sbjct: 50  RSWIKIDQNGDLEILELDKATIMRHCSLPARDLRLLDPLFIYPSTILGRE 99


>B9HXJ2_POPTR (tr|B9HXJ2) Magnesium transporter OS=Populus trichocarpa
           GN=POPTRDRAFT_566926 PE=4 SV=1
          Length = 419

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/50 (46%), Positives = 39/50 (78%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W++ D+ GNS+++E DK TI++  ++P+RDLR+L P+F + S ILG++
Sbjct: 50  RSWIKIDQDGNSKILELDKVTIMRHCSLPSRDLRLLDPLFIYPSTILGRE 99


>Q3LVP2_TAROF (tr|Q3LVP2) TO36-3rc (Fragment) OS=Taraxacum officinale GN=To36-3rc
           PE=2 SV=1
          Length = 111

 Score = 57.0 bits (136), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 40/50 (80%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W++ ++ GNS+++E DK++++++  +PARDLR+L P+F + S ILG++
Sbjct: 10  RSWIKIEENGNSKVVELDKASVMRQCCLPARDLRLLDPLFIYPSTILGRE 59


>B8LQE7_PICSI (tr|B8LQE7) Putative uncharacterized protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 483

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 34/50 (68%)

Query: 75  RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
           R W+  D  G ++++E  K  I++R  +PARDLR+L P+ S+ S ILG+D
Sbjct: 30  RAWLLIDGHGGTQVVEAGKHDIMRRTGLPARDLRVLDPLLSYPSTILGRD 79