Jatropha Genome Database

JcCB0171801.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0171801.10 - phase: 0 
         (142 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SXI9_RICCO (tr|B9SXI9) Putative uncharacterized protein OS=Ric...   181   2e-44
A9PDT8_POPTR (tr|A9PDT8) Predicted protein OS=Populus trichocarp...   176   1e-42
A9P940_POPTR (tr|A9P940) Predicted protein OS=Populus trichocarp...   154   2e-36
D7TIE0_VITVI (tr|D7TIE0) Whole genome shotgun sequence of line P...   137   6e-31
C6SX85_SOYBN (tr|C6SX85) Putative uncharacterized protein OS=Gly...   120   6e-26
D7LI20_ARALY (tr|D7LI20) Putative uncharacterized protein OS=Ara...   109   1e-22
O23683_ARATH (tr|O23683) At2g42110 OS=Arabidopsis thaliana GN=At...   106   7e-22

>B9SXI9_RICCO (tr|B9SXI9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0503810 PE=4 SV=1
          Length = 153

 Score =  181 bits (460), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/153 (65%), Positives = 113/153 (73%), Gaps = 13/153 (8%)

Query: 1   MDSASTNSTTTVQHVTKKSSDELLRKFAEV-EDDNDEAXXXXXXXXXX------XXXXXQ 53
           MD+ +  S  TVQHVTKKSSDELLRKFAEV +DDND A                      
Sbjct: 1   MDTTNV-SAATVQHVTKKSSDELLRKFAEVGDDDNDTAEAKKMSKRRKRSIRKDNTAAAG 59

Query: 54  ARKEVA---CESPSHY--SNSLVEKRSLLPPVTRKSVLLRQLGIGRSQLRARDFKNKSVF 108
            R EV+   CESP+H   +++LVE+RSLLP VTRKSVLLRQLGIGRSQLRARD KNKS+ 
Sbjct: 60  GRGEVSSLSCESPAHCNTTSALVERRSLLPVVTRKSVLLRQLGIGRSQLRARDIKNKSIL 119

Query: 109 VAIEKTWRKTLEGASRVLLEKHYNRHRRLISDV 141
           VA+EKTWRKTLEGAS+VLLEKHYNRHRRLI+DV
Sbjct: 120 VALEKTWRKTLEGASKVLLEKHYNRHRRLINDV 152


>A9PDT8_POPTR (tr|A9PDT8) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_576258 PE=2 SV=1
          Length = 154

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 12/153 (7%)

Query: 1   MDSASTNS--TTTVQHVTKKSSDELLRKFAEVEDDNDEAXXXXXXXXXXXXXXXQARKEV 58
           MD+A+ NS  TTTVQH+TKKSSD LLRKFAE+  D+D+A                 R+  
Sbjct: 1   MDAANDNSSRTTTVQHITKKSSDVLLRKFAEMSGDDDDANEAKKLELARVLRRKSKRRRT 60

Query: 59  --------ACESPSHY--SNSLVEKRSLLPPVTRKSVLLRQLGIGRSQLRARDFKNKSVF 108
                   +CESPSHY  S++LVE+RSLLPPVTRKS LLRQLGIGRSQL+ARD KNKS+ 
Sbjct: 61  RRDIEGGNSCESPSHYNSSSTLVERRSLLPPVTRKSALLRQLGIGRSQLKARDIKNKSIL 120

Query: 109 VAIEKTWRKTLEGASRVLLEKHYNRHRRLISDV 141
            +I+KTWRKTLEGAS+VLLEKH +RHRRLI+D+
Sbjct: 121 ASIKKTWRKTLEGASKVLLEKHCSRHRRLINDL 153


>A9P940_POPTR (tr|A9P940) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_561254 PE=2 SV=1
          Length = 151

 Score =  154 bits (390), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/150 (63%), Positives = 113/150 (75%), Gaps = 9/150 (6%)

Query: 1   MDSASTNST-TTVQHVTKKSSDELLRKFAE--VEDDNDEAXXXXXXXXXXXXXXXQARKE 57
           M +A  NS+ TTVQHVTKKSSDELLRKFAE   +DD +EA               + R++
Sbjct: 1   MVTADKNSSSTTVQHVTKKSSDELLRKFAEEMSDDDANEAKKLELARVLKRRKRRKTRRD 60

Query: 58  V----ACESPSHYSNS--LVEKRSLLPPVTRKSVLLRQLGIGRSQLRARDFKNKSVFVAI 111
                 CESPSHY +S  LVE+RSLLPPVTRKSVLLRQLGIGR QL+ARD K+KS+  +I
Sbjct: 61  FESGNLCESPSHYKSSSSLVERRSLLPPVTRKSVLLRQLGIGRLQLKARDTKSKSILASI 120

Query: 112 EKTWRKTLEGASRVLLEKHYNRHRRLISDV 141
           EKTWR+T+EGAS+VLLEKHYNRHRRLI+D+
Sbjct: 121 EKTWRRTVEGASKVLLEKHYNRHRRLINDM 150


>D7TIE0_VITVI (tr|D7TIE0) Whole genome shotgun sequence of line PN40024,
           scaffold_7.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00033497001 PE=4 SV=1
          Length = 136

 Score =  137 bits (344), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 3/134 (2%)

Query: 9   TTTVQHVTKKSSDELLRKFAEVEDDNDEAXXXXXXXXXXXXXXXQARKEVACESPSHYSN 68
           +  VQHVTK SSD+LLRKFA+     D+A               ++R+    ESP + S+
Sbjct: 4   SAKVQHVTKASSDQLLRKFAQA--GGDDAPAKELRVVKRRKKSRRSREGHNRESPPNGSS 61

Query: 69  SLVEKRSLLPPVTRKSV-LLRQLGIGRSQLRARDFKNKSVFVAIEKTWRKTLEGASRVLL 127
            +VEKRSLLPP TR+S  LL QLGIGRSQLR RD +NKS+  AIEKTWR+T++GAS+VL+
Sbjct: 62  GVVEKRSLLPPATRRSAALLLQLGIGRSQLRVRDLRNKSILGAIEKTWRRTIKGASKVLI 121

Query: 128 EKHYNRHRRLISDV 141
           E+HYN+H+RLI++ 
Sbjct: 122 ERHYNQHKRLINEA 135


>C6SX85_SOYBN (tr|C6SX85) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 128

 Score =  120 bits (300), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/143 (51%), Positives = 93/143 (65%), Gaps = 18/143 (12%)

Query: 1   MDSASTNSTTTVQHVTKKSSDELLRKFAEVEDDNDEAXXXXXXXXXXXXXXXQARKEVAC 60
           MD+A   +   VQHVT+KSSDELLRKFAE    ++EA               +   E  C
Sbjct: 1   MDTA-IATEAKVQHVTRKSSDELLRKFAEA--GSNEAGKNKRRKKK------KRESECDC 51

Query: 61  ESPSHYSNSLVEKRSLLPP-VTRKSVLLRQLGIGRSQLRARDFKNKS-VFVAIEKTWRKT 118
           +SP +   ++VE+RSLLPP VTR+SVLLRQLG+       RD +NKS +F  I KTWR T
Sbjct: 52  DSPMNGGAAVVERRSLLPPKVTRRSVLLRQLGV-------RDVRNKSSLFGTIHKTWRIT 104

Query: 119 LEGASRVLLEKHYNRHRRLISDV 141
           +E ASRV LEKHY+RH+RLI+D+
Sbjct: 105 VESASRVFLEKHYHRHKRLINDI 127


>D7LI20_ARALY (tr|D7LI20) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_483297 PE=4 SV=1
          Length = 136

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/139 (48%), Positives = 83/139 (59%), Gaps = 13/139 (9%)

Query: 6   TNSTTTVQHVTKKSSDELLRKFAEVEDDNDEAXXXXXXXXXXXXXXXQARKEVACESPSH 65
           T+  T + HV KKSSDELLRKFA+  DD DE+               +   ++   S S 
Sbjct: 9   TSIPTKITHVNKKSSDELLRKFAD-PDDVDESKSTKRRKKSAKNSSRENGVDIESNSIS- 66

Query: 66  YSNSLVEKRSLL--PPVTRKSVLLRQLGIGRSQLRARDFKNKSVFVAIEKTWRKTLEGAS 123
               LVE++ LL  P   R+S+ LRQL  G+S LR     NKS+   I KTWRKT+EGAS
Sbjct: 67  ----LVERKRLLLAPASKRRSLFLRQLASGKSHLR-----NKSLVRTIGKTWRKTMEGAS 117

Query: 124 RVLLEKHYNRHRRLISDVA 142
           RV +EKHYNRHRRLI+DV 
Sbjct: 118 RVFIEKHYNRHRRLINDVV 136


>O23683_ARATH (tr|O23683) At2g42110 OS=Arabidopsis thaliana GN=At2g42110 PE=2
           SV=1
          Length = 137

 Score =  106 bits (265), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/139 (48%), Positives = 83/139 (59%), Gaps = 12/139 (8%)

Query: 6   TNSTTTVQHVTKKSSDELLRKFAEVEDDNDEAXXXXXXXXXXXXXXXQARKEVACESPSH 65
           T   T + HV KKSSDELLRKFA+  DD DE+               +  K V  ES   
Sbjct: 9   TTIPTKITHVNKKSSDELLRKFAD-PDDVDESSKSTKRRKKSAKSSSRE-KGVDIES--- 63

Query: 66  YSNSLVEKRSLL--PPVTRKSVLLRQLGIGRSQLRARDFKNKSVFVAIEKTWRKTLEGAS 123
            ++ LVE++ LL  P   R+S+ +RQL  G+S LR     NKS+   I KTWRKT+EGAS
Sbjct: 64  NTSGLVERKRLLLAPASKRRSLFIRQLASGKSHLR-----NKSLVRTIGKTWRKTMEGAS 118

Query: 124 RVLLEKHYNRHRRLISDVA 142
           RV +EKHYNRHRRL +DV 
Sbjct: 119 RVFIEKHYNRHRRLTNDVV 137