Jatropha Genome Database

JcCB0162471.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0162471.10 + phase: 1 /pseudo/partial
         (125 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9T719_RICCO (tr|B9T719) Aspartic proteinase nepenthesin-1, puta...   112   1e-23
B9MXB6_POPTR (tr|B9MXB6) Predicted protein OS=Populus trichocarp...    96   2e-18
D7T5Q6_VITVI (tr|D7T5Q6) Whole genome shotgun sequence of line P...    80   7e-14
C6T2G2_SOYBN (tr|C6T2G2) Putative uncharacterized protein OS=Gly...    59   1e-07
C5X6X8_SORBI (tr|C5X6X8) Putative uncharacterized protein Sb02g0...    56   1e-06
B9T721_RICCO (tr|B9T721) Aspartic proteinase nepenthesin-2, puta...    56   1e-06

>B9T719_RICCO (tr|B9T719) Aspartic proteinase nepenthesin-1, putative OS=Ricinus
           communis GN=RCOM_0310740 PE=3 SV=1
          Length = 533

 Score =  112 bits (280), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 5/121 (4%)

Query: 10  LILGGMLTYIVXVLSKVEMXISSD--MTGYLIVFNRERNVLGWKPSNCYDALNTNTFPIN 67
           ++ GG   Y + ++   ++ I     MTGY IVFNRERNVLGWK S+CYD ++T TFP++
Sbjct: 413 ILQGGASIYCLAIVKSGDVNIIGQNFMTGYRIVFNRERNVLGWKASDCYDDMDTTTFPVD 472

Query: 68  PLSPAVPPATAVNPEXXXXXXXXXXXXXXXXPPANHSPRLKR---FTFTIIMVLIPFFII 124
           P+SP +PPATAVNP+                P  N++P+L +    TF IIMVLIPFF I
Sbjct: 473 PISPGIPPATAVNPQATAGSGNTTEVSGTPPPVGNNAPKLPKLNSLTFAIIMVLIPFFTI 532

Query: 125 V 125
           V
Sbjct: 533 V 533


>B9MXB6_POPTR (tr|B9MXB6) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_741238 PE=3 SV=1
          Length = 484

 Score = 95.5 bits (236), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 8/92 (8%)

Query: 34  MTGYLIVFNRERNVLGWKPSNCYDALNTNTFPINPLSPAVPPATAVNPEXXXXXXXXXXX 93
           MTG+ IVF+RER +LGWKPSNCYD ++TNT  ++P + AVPPATAVNPE           
Sbjct: 401 MTGHRIVFDRERMILGWKPSNCYDNMDTNTLAVSP-NTAVPPATAVNPE-------AKQI 452

Query: 94  XXXXXPPANHSPRLKRFTFTIIMVLIPFFIIV 125
                P  +HSPR K F FT++M L  FF IV
Sbjct: 453 PASSPPGGSHSPRSKPFNFTLMMTLALFFAIV 484


>D7T5Q6_VITVI (tr|D7T5Q6) Whole genome shotgun sequence of line PN40024,
           scaffold_510.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00007227001 PE=4 SV=1
          Length = 306

 Score = 80.1 bits (196), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 34  MTGYLIVFNRERNVLGWKPSNCYDALNTNTFPINPL-SPAVPPATAVNPEXXXXXXXXXX 92
           MTGY I+F+RE+ VLGW  SNCYD   +NT PINP  SP VPP  +V PE          
Sbjct: 213 MTGYRIIFDREKMVLGWTKSNCYDTEESNTLPINPANSPVVPPTVSVEPEATAGNGNGSH 272

Query: 93  XXXXXXPPANHSPRLKRFTFTIIMVLIP 120
                 P AN SP    F   ++MV +P
Sbjct: 273 ISEAPSPLANGSPTWNSFILALLMVFLP 300


>C6T2G2_SOYBN (tr|C6T2G2) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 244

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 50/93 (53%), Gaps = 12/93 (12%)

Query: 34  MTGYLIVFNRERNVLGWKPSNCYDALNTNTFPIN--PLSPAVPPATAVNPEXXXXXXXXX 91
           M GY IVF+R+   LGWK +NC D + +NT PIN    SPAV PA AVNP          
Sbjct: 161 MIGYKIVFDRDNMNLGWKETNCSDDVLSNTSPINTPSPSPAVSPAIAVNP---------V 211

Query: 92  XXXXXXXPPANHSPRLKRFTFTIIMVLIPFFII 124
                   P N S R+K  TFT ++VL+P   I
Sbjct: 212 ATSNPSINPPNRSFRIKP-TFTFVVVLLPLIAI 243


>C5X6X8_SORBI (tr|C5X6X8) Putative uncharacterized protein Sb02g031460 OS=Sorghum
           bicolor GN=Sb02g031460 PE=3 SV=1
          Length = 523

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 31/48 (64%)

Query: 34  MTGYLIVFNRERNVLGWKPSNCYDALNTNTFPINPLSPAVPPATAVNP 81
           M+G  +VF+RER VLGWK  NCY   N++  P+NP    VPP  A+ P
Sbjct: 427 MSGLKVVFDRERKVLGWKKFNCYSVDNSSNLPVNPNPSGVPPKPALGP 474


>B9T721_RICCO (tr|B9T721) Aspartic proteinase nepenthesin-2, putative OS=Ricinus
           communis GN=RCOM_0311060 PE=3 SV=1
          Length = 518

 Score = 56.2 bits (134), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 1/45 (2%)

Query: 34  MTGYLIVFNRERNVLGWKPSNCYDALNTNTFPINPLSPAVPPATA 78
           MTGY +VF+RE+ VLGWK ++CYD    N+FP  P +  VPPA A
Sbjct: 424 MTGYRVVFDREKLVLGWKETDCYDQ-EYNSFPTEPHASDVPPAVA 467