Jatropha Genome Database

JcCB0161221.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0161221.20 + phase: 0 
         (122 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9STZ9_RICCO (tr|B9STZ9) Putative uncharacterized protein OS=Ric...    78   3e-13
C6SVS1_SOYBN (tr|C6SVS1) Putative uncharacterized protein OS=Gly...    71   4e-11

>B9STZ9_RICCO (tr|B9STZ9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0753080 PE=4 SV=1
          Length = 120

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/116 (43%), Positives = 62/116 (53%), Gaps = 9/116 (7%)

Query: 6   FLFCNLSRPSILVRPWTPYFLYNPIKRNKGSSAEKENEGLAIDQERASSTADEFXXXXXX 65
           FL C L+R S+ VRP TP  L NP+ +        EN+G    +E+A S ADEF      
Sbjct: 5   FLLCKLTR-SLTVRPSTP-LLCNPMMKR---YTHAENQGHRGVEEKAPSLADEFRRVAEE 59

Query: 66  XXXXXXXXXXXXDQGITSQTGEKTIDGAEEAS----GDSNIESVKNRYKKHELGAN 117
                       DQGI SQT +KT DGAEEA+    G  + E+VK RYK HE GA+
Sbjct: 60  KAKAEEKTEQVADQGIASQTSDKTSDGAEEAATVGRGGGDTEAVKGRYKGHEPGAD 115


>C6SVS1_SOYBN (tr|C6SVS1) Putative uncharacterized protein OS=Glycine max PE=4
           SV=1
          Length = 104

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 65/115 (56%), Gaps = 13/115 (11%)

Query: 1   MSGRSFL-FCNLSRPSILVRPWTPYFLYNPIKRNKGSSAEKENEGLAIDQERASSTADEF 59
           M+G  FL   N S  S LV+P  P  LYNPIK N G +++ ++  L   +ERA STA+EF
Sbjct: 1   MAGAQFLNLFNSSSRSSLVKPSRP-LLYNPIK-NYGQASKGKHSRLV--EERAPSTAEEF 56

Query: 60  XXXXXXXXXXXXXXXXXXDQGITSQTGEKTIDGAEEAS-GDSNIESVKNRYKKHE 113
                              +G+ SQ+  K IDGAEEAS G S +ESVKNRYK HE
Sbjct: 57  ERVAEEKAKEA-------QKGVASQSLGKAIDGAEEASIGKSKVESVKNRYKGHE 104