Jatropha Genome Database

JcCB0158591.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0158591.10 + phase: 2 /partial
         (82 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RLK6_RICCO (tr|B9RLK6) LIGULELESS1 protein, putative OS=Ricinu...   139   1e-31
A5B110_VITVI (tr|A5B110) Putative uncharacterized protein OS=Vit...   112   1e-23
D7T9Z5_VITVI (tr|D7T9Z5) Whole genome shotgun sequence of line P...    84   7e-15
B9HIG5_POPTR (tr|B9HIG5) Predicted protein OS=Populus trichocarp...    81   4e-14
B9HXH7_POPTR (tr|B9HXH7) Putative uncharacterized protein OS=Pop...    65   3e-09
B9REB5_RICCO (tr|B9REB5) LIGULELESS1 protein, putative OS=Ricinu...    58   3e-07

>B9RLK6_RICCO (tr|B9RLK6) LIGULELESS1 protein, putative OS=Ricinus communis
           GN=RCOM_1468500 PE=4 SV=1
          Length = 557

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 65/79 (82%), Positives = 71/79 (89%)

Query: 3   EGSHLGSILIPDGSDAINFDVTDGIYQGSDFMNAKGSLSCEDGTTVDLLQLSSQLQRVEH 62
           EGS LGSIL+ DGSDAINF + DG+YQGS+FMNAK  LSCEDGTT+DLLQLSSQL+RVE 
Sbjct: 478 EGSRLGSILLSDGSDAINFVIADGMYQGSNFMNAKDCLSCEDGTTIDLLQLSSQLERVER 537

Query: 63  QKQSMQVKQENDALCWPHI 81
           QKQSMQVKQENDA CWPHI
Sbjct: 538 QKQSMQVKQENDAFCWPHI 556


>A5B110_VITVI (tr|A5B110) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_040028 PE=4 SV=1
          Length = 686

 Score =  112 bits (280), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/76 (68%), Positives = 61/76 (80%)

Query: 2   CEGSHLGSILIPDGSDAINFDVTDGIYQGSDFMNAKGSLSCEDGTTVDLLQLSSQLQRVE 61
            EG+HLG ILI D S+ +NF+VTDGI+QGSDF+N K  L CE G T+DLLQLSSQL RVE
Sbjct: 607 AEGNHLGPILISDCSEPVNFEVTDGIFQGSDFVNTKDCLPCETGPTIDLLQLSSQLHRVE 666

Query: 62  HQKQSMQVKQENDALC 77
           HQ+QS+ VKQEND  C
Sbjct: 667 HQRQSIHVKQENDTFC 682


>D7T9Z5_VITVI (tr|D7T9Z5) Whole genome shotgun sequence of line PN40024,
           scaffold_11.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00012247001 PE=4 SV=1
          Length = 498

 Score = 83.6 bits (205), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/79 (54%), Positives = 58/79 (73%), Gaps = 2/79 (2%)

Query: 3   EGSHLGSILIPDGSDAINFDV-TDGIYQGSDFMNAKGSLSCEDGTTVDLLQLSSQLQRVE 61
           E + +G +++PDG +A++F+V T+  +QGSDF+NAK S S E   TVDLLQLSS L+RVE
Sbjct: 418 EVAQMGPVMLPDGGNAVSFEVRTNRNFQGSDFLNAKYSHSSEREPTVDLLQLSSHLKRVE 477

Query: 62  HQKQSMQVKQENDAL-CWP 79
            Q+  M VKQEND   C+P
Sbjct: 478 WQRNYMHVKQENDDFHCFP 496


>B9HIG5_POPTR (tr|B9HIG5) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_656548 PE=4 SV=1
          Length = 235

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 1/78 (1%)

Query: 1   FCEGSHLGSILIPDGSDAINFDV-TDGIYQGSDFMNAKGSLSCEDGTTVDLLQLSSQLQR 59
           F E + +G  ++P    A +F V TDG  Q SD +NAK  +S E+G+TVDLLQLSS LQR
Sbjct: 150 FIEVNDMGPFVVPGSGHAADFQVETDGFLQQSDILNAKYGVSPENGSTVDLLQLSSHLQR 209

Query: 60  VEHQKQSMQVKQENDALC 77
           VE Q+ SMQVK EN+  C
Sbjct: 210 VEQQRNSMQVKHENEEFC 227


>B9HXH7_POPTR (tr|B9HXH7) Putative uncharacterized protein OS=Populus trichocarpa
           GN=POPTRDRAFT_769914 PE=4 SV=1
          Length = 600

 Score = 64.7 bits (156), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 1   FCEGSHLGSILIPDGSDAINFDV-TDGIYQGSDFMNAKGSLSCEDGTTVDLLQLSSQLQR 59
           F E  ++G   +     A +  V TDG    SDF+NAK  +S  + +TVD LQLSS LQR
Sbjct: 455 FIEVDNMGPFGVSGSGHAADLKVETDGFLHHSDFLNAKHCVSPANESTVDWLQLSSHLQR 514

Query: 60  VEHQKQSMQVKQENDALC 77
           VE Q+ SM+VK EN+  C
Sbjct: 515 VEQQRNSMKVKHENEDFC 532


>B9REB5_RICCO (tr|B9REB5) LIGULELESS1 protein, putative OS=Ricinus communis
           GN=RCOM_1620060 PE=4 SV=1
          Length = 512

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 34/44 (77%)

Query: 29  QGSDFMNAKGSLSCEDGTTVDLLQLSSQLQRVEHQKQSMQVKQE 72
           QG DF++ K  +S E+GTTVDLLQLSS L RVE Q+ SMQVK E
Sbjct: 456 QGPDFVSDKFCISAENGTTVDLLQLSSHLHRVEQQRNSMQVKHE 499