Jatropha Genome Database

JcCB0151651.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0151651.10 + phase: 1 /pseudo/partial
         (168 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9T3C7_RICCO (tr|B9T3C7) RING finger protein, putative OS=Ricinu...   125   1e-27
B9IBA6_POPTR (tr|B9IBA6) Predicted protein OS=Populus trichocarp...    97   8e-19
D7ST10_VITVI (tr|D7ST10) Whole genome shotgun sequence of line P...    77   5e-13
B9GQL0_POPTR (tr|B9GQL0) Predicted protein OS=Populus trichocarp...    72   2e-11
C6T066_SOYBN (tr|C6T066) Putative uncharacterized protein OS=Gly...    68   3e-10
B7FMT2_MEDTR (tr|B7FMT2) Putative uncharacterized protein OS=Med...    67   7e-10
D7MM51_ARALY (tr|D7MM51) Putative uncharacterized protein OS=Ara...    66   1e-09
Q8LF11_ARATH (tr|Q8LF11) Putative uncharacterized protein OS=Ara...    63   9e-09
B7FGG8_MEDTR (tr|B7FGG8) Putative uncharacterized protein OS=Med...    62   1e-08
Q8GS41_ARATH (tr|Q8GS41) Putative RING zinc finger OS=Arabidopsi...    62   3e-08
Q94AH4_ARATH (tr|Q94AH4) Putative uncharacterized protein At5g48...    62   3e-08
C6TML6_SOYBN (tr|C6TML6) Putative uncharacterized protein OS=Gly...    55   3e-06

>B9T3C7_RICCO (tr|B9T3C7) RING finger protein, putative OS=Ricinus communis
           GN=RCOM_1750200 PE=4 SV=1
          Length = 224

 Score =  125 bits (315), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/110 (58%), Positives = 72/110 (65%), Gaps = 2/110 (1%)

Query: 21  YARLRAIAHEIMTQRNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEH 80
           +A  +  A     QRNH QRT G+ V+VDVDSGRTTRLTY              +INC+H
Sbjct: 79  FAEAKNNAQRNNLQRNHAQRTRGSTVIVDVDSGRTTRLTYAQNKRRRVSSN-QTIINCDH 137

Query: 81  YVNLESSGSSMRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIF 130
           YVNLESS SSMRDN Q        +  TFNCPICMGPF+EETSTKCGHIF
Sbjct: 138 YVNLESSSSSMRDNIQPRPPPPPKEP-TFNCPICMGPFIEETSTKCGHIF 186


>B9IBA6_POPTR (tr|B9IBA6) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_573353 PE=4 SV=1
          Length = 213

 Score = 96.7 bits (239), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 64/100 (64%), Gaps = 8/100 (8%)

Query: 35  RNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHYVNLESSGSS---- 90
           +N+++R  G AVVVDV+SGRT+RL++              +INC+ Y+NLE   SS    
Sbjct: 82  KNNSRRARGRAVVVDVESGRTSRLSHNNLNKRRRVPPNQTIINCDLYINLEGGSSSSSRS 141

Query: 91  MRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIF 130
           MR+N Q L      KEPTFNCPIC+ P VEE STKCGHIF
Sbjct: 142 MRENVQTL----PPKEPTFNCPICLCPLVEEMSTKCGHIF 177


>D7ST10_VITVI (tr|D7ST10) Whole genome shotgun sequence of line PN40024,
           scaffold_574.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00007471001 PE=4 SV=1
          Length = 163

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 54/107 (50%), Gaps = 5/107 (4%)

Query: 28  AHEIMTQRNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHYVNLESS 87
           A      RN+++R  G   VVDVD    T                  +IN + Y+NLESS
Sbjct: 22  ATAFAAARNNSRRIRGR-TVVDVDLEVQTTRPLNNRNKRRRAPPNQTIINDDRYINLESS 80

Query: 88  GSSMRDNAQQLQX----XXXXKEPTFNCPICMGPFVEETSTKCGHIF 130
            S +R+N    Q         KEPTFNCPICMG  V+E STKCGHIF
Sbjct: 81  NSLLRENKPPEQTWHVPPLPPKEPTFNCPICMGQLVDEMSTKCGHIF 127


>B9GQL0_POPTR (tr|B9GQL0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_711508 PE=4 SV=1
          Length = 209

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 58/99 (58%), Gaps = 16/99 (16%)

Query: 35  RNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHYVNLESSGSS---M 91
           +N+++R    A+VVDV+SG   R T+              +INC+ Y+NLE   SS    
Sbjct: 88  KNNSRR----ALVVDVESG--GRFTHNKRRRVPPN---QTIINCDLYINLEGGSSSSSSK 138

Query: 92  RDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIF 130
           R+N Q L      KEPTFNCPIC+ P VEE STKCGHIF
Sbjct: 139 RENVQTL----PPKEPTFNCPICLCPLVEEMSTKCGHIF 173


>C6T066_SOYBN (tr|C6T066) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 205

 Score = 68.2 bits (165), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 13/106 (12%)

Query: 25  RAIAHEIMTQRNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHYVNL 84
           RA A      R   +RT     +VDVD    TR               + +INC+ Y+NL
Sbjct: 77  RAFAEAKNNSRRVRRRT-----IVDVDLEDQTRRNKRRRELP------NLIINCDKYINL 125

Query: 85  ESSGSSMRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIF 130
           E   SSM  + ++       KE  FNCPICMGP V E ST+CGHIF
Sbjct: 126 EGGSSSMEQSFKK--PPEPPKELVFNCPICMGPMVHEMSTRCGHIF 169


>B7FMT2_MEDTR (tr|B7FMT2) Putative uncharacterized protein OS=Medicago truncatula
           PE=2 SV=1
          Length = 242

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 35  RNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHYVNLESSGSSMRDN 94
           +N+++R  G   VVDVD     RL+              ++ NC+ Y+NL++S S+  ++
Sbjct: 114 KNNSRRNRGR-TVVDVDLEEQIRLSNNNRNKRRRESPKRSIFNCDLYINLDASSSNTMES 172

Query: 95  AQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIF 130
            ++           F CPICMGP VEE ST+CGHIF
Sbjct: 173 VKKPPEPPKEP--VFTCPICMGPMVEEMSTRCGHIF 206


>D7MM51_ARALY (tr|D7MM51) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_494930 PE=4 SV=1
          Length = 203

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 26  AIAHEIMTQRNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEH-YVNL 84
           A A      RN  +R     ++VDV+SG TTRL                VI+CEH YVN 
Sbjct: 68  AFAEAKSKSRNARRR----PLMVDVESGGTTRLPANISNKRRRVPSSEPVIDCEHAYVND 123

Query: 85  ESSGSSMRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIFLXG 133
           E + SS    ++            F CPICM PF EE STKCGHIF  G
Sbjct: 124 EVNMSSRMSRSKAPAPPPEEP--KFTCPICMCPFTEEMSTKCGHIFCKG 170


>Q8LF11_ARATH (tr|Q8LF11) Putative uncharacterized protein OS=Arabidopsis
           thaliana PE=2 SV=1
          Length = 203

 Score = 63.2 bits (152), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 26  AIAHEIMTQRNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHY-VNL 84
           A A      RN  +R     ++VDV+SG TTRL               +VI+CEH  VN 
Sbjct: 68  AFAEAKSKSRNARRR----PLMVDVESGGTTRLPANISNKRRRIPSSESVIDCEHASVND 123

Query: 85  ESSGSSMRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIFLXG 133
           E + SS    ++            F CPICM PF EE STKCGHIF  G
Sbjct: 124 EVNMSSRVSRSKAPAPPPEEP--KFTCPICMCPFTEEMSTKCGHIFCKG 170


>B7FGG8_MEDTR (tr|B7FGG8) Putative uncharacterized protein OS=Medicago truncatula
           PE=2 SV=1
          Length = 247

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 8/101 (7%)

Query: 35  RNHTQRTCGNAVVVDVD-----SGRTTRLTYXXXXXXXXXXXXHAVINCEHYVNLESSGS 89
           +N+++R  G   VVDVD     +    RL+              ++ NC+ Y+NL++S S
Sbjct: 114 KNNSRRNRGR-TVVDVDLVMFFAEEQIRLSNNNRNKRRRESPKRSIFNCDLYINLDASSS 172

Query: 90  SMRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIF 130
           +  ++ ++           F CPICMGP VEE ST+CGHIF
Sbjct: 173 NTMESVKKPPEPPKEP--VFTCPICMGPMVEEMSTRCGHIF 211


>Q8GS41_ARATH (tr|Q8GS41) Putative RING zinc finger OS=Arabidopsis thaliana
           GN=At5g48655/K15N18.13 PE=2 SV=1
          Length = 203

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 26  AIAHEIMTQRNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHY-VNL 84
           A A      RN  +R     ++VDV+SG TTR                +VI+CEH  VN 
Sbjct: 68  AFAEAKSKSRNARRR----PLMVDVESGGTTRFPANISNKRRRIPSSESVIDCEHASVND 123

Query: 85  ESSGSSMRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIFLXG 133
           E + SS    ++            F CPICM PF EE STKCGHIF  G
Sbjct: 124 EVNMSSRVSRSKAPAPPPEEP--KFTCPICMCPFTEEMSTKCGHIFCKG 170


>Q94AH4_ARATH (tr|Q94AH4) Putative uncharacterized protein At5g48655/K15N18.13
           (Fragment) OS=Arabidopsis thaliana
           GN=At5g48655/K15N18.13 PE=2 SV=2
          Length = 192

 Score = 61.6 bits (148), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 26  AIAHEIMTQRNHTQRTCGNAVVVDVDSGRTTRLTYXXXXXXXXXXXXHAVINCEHY-VNL 84
           A A      RN  +R     ++VDV+SG TTR                +VI+CEH  VN 
Sbjct: 57  AFAEAKSKSRNARRR----PLMVDVESGGTTRFPANISNKRRRIPSSESVIDCEHASVND 112

Query: 85  ESSGSSMRDNAQQLQXXXXXKEPTFNCPICMGPFVEETSTKCGHIFLXG 133
           E + SS    ++            F CPICM PF EE STKCGHIF  G
Sbjct: 113 EVNMSSRVSRSKAPAPPPEEP--KFTCPICMCPFTEEMSTKCGHIFCKG 159


>C6TML6_SOYBN (tr|C6TML6) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 206

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 73  HAVINCEHYVNLESSGSSMRDNAQQLQXXXXXKEP----TFNCPICMGPFVEETSTKCGH 128
             +IN + YVNL ++ SS  +NA++        E      FNCPICM P VEE ST+CGH
Sbjct: 109 QTIINGDLYVNLTNNSSSASENAKKTPEPPKEPEAPKEPVFNCPICMSPLVEEMSTRCGH 168

Query: 129 IF 130
           IF
Sbjct: 169 IF 170