Jatropha Genome Database
- JcCB0133991.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0133991.10 + phase: 2 /partial
(86 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
C0LE64_9ROSI (tr|C0LE64) DNA-directed RNA polymerase OS=Jatropha... 175 2e-42
A9XW95_MANES (tr|A9XW95) DNA-directed RNA polymerase (Fragment) ... 157 2e-37
A9XWA4_PHYCY (tr|A9XWA4) DNA-directed RNA polymerase (Fragment) ... 151 2e-35
A9XW72_9ROSI (tr|A9XW72) RNA polymerase beta'' subunit (Fragment... 144 4e-33
A9XW88_9ROSI (tr|A9XW88) DNA-directed RNA polymerase (Fragment) ... 142 1e-32
A9XWC1_9ROSI (tr|A9XWC1) DNA-directed RNA polymerase (Fragment) ... 140 6e-32
A9XW96_9ROSI (tr|A9XW96) DNA-directed RNA polymerase (Fragment) ... 139 8e-32
A1XKB0_EUPMI (tr|A1XKB0) RNA polymerase beta chain (Fragment) OS... 139 9e-32
A9XWB6_9ROSI (tr|A9XWB6) DNA-directed RNA polymerase (Fragment) ... 139 1e-31
A9XW53_9ROSI (tr|A9XW53) DNA-directed RNA polymerase (Fragment) ... 137 4e-31
A9XW66_CROCA (tr|A9XW66) DNA-directed RNA polymerase (Fragment) ... 137 5e-31
A1XKD9_9ROSI (tr|A1XKD9) RNA polymerase beta chain (Fragment) OS... 135 1e-30
A9XWC2_9ROSI (tr|A9XWC2) DNA-directed RNA polymerase (Fragment) ... 135 2e-30
A9XWC0_9FABA (tr|A9XWC0) DNA-directed RNA polymerase (Fragment) ... 135 2e-30
A9XWA0_9ROSI (tr|A9XWA0) DNA-directed RNA polymerase (Fragment) ... 134 3e-30
A9XW82_9ROSI (tr|A9XW82) DNA-directed RNA polymerase (Fragment) ... 134 4e-30
A9XWB7_9ROSI (tr|A9XWB7) DNA-directed RNA polymerase OS=Staphyle... 133 5e-30
A1XK93_STATR (tr|A1XK93) RNA polymerase beta chain (Fragment) OS... 133 5e-30
A9XW87_IXEBR (tr|A9XW87) DNA-directed RNA polymerase (Fragment) ... 132 8e-30
A9XW46_9ROSI (tr|A9XW46) DNA-directed RNA polymerase (Fragment) ... 132 1e-29
A9XW40_9MAGN (tr|A9XW40) DNA-directed RNA polymerase OS=Berberid... 131 2e-29
A9XWB3_9ROSI (tr|A9XWB3) DNA-directed RNA polymerase (Fragment) ... 131 2e-29
A1XKF0_9MAGN (tr|A1XKF0) RNA polymerase beta chain (Fragment) OS... 130 3e-29
A9XWB0_QUISA (tr|A9XWB0) DNA-directed RNA polymerase (Fragment) ... 130 4e-29
A9XW64_9ROSI (tr|A9XW64) DNA-directed RNA polymerase (Fragment) ... 130 7e-29
A6YAJ8_9MAGN (tr|A6YAJ8) RNA polymerase beta' subunit (Fragment)... 129 8e-29
A6YAK5_9MAGN (tr|A6YAK5) RNA polymerase beta' subunit (Fragment)... 129 1e-28
A9XW73_EUCLU (tr|A9XW73) DNA-directed RNA polymerase (Fragment) ... 129 1e-28
A9XWC3_TERCT (tr|A9XWC3) DNA-directed RNA polymerase (Fragment) ... 128 2e-28
A6YAK4_9MAGN (tr|A6YAK4) RNA polymerase beta' subunit (Fragment)... 128 2e-28
A9XW69_9ROSI (tr|A9XW69) DNA-directed RNA polymerase (Fragment) ... 128 2e-28
A9XW41_AILAL (tr|A9XW41) DNA-directed RNA polymerase (Fragment) ... 128 2e-28
A9XW93_LIQST (tr|A9XW93) DNA-directed RNA polymerase OS=Liquidam... 127 3e-28
A9XW67_9MYRT (tr|A9XW67) DNA-directed RNA polymerase (Fragment) ... 127 4e-28
A6YAL1_LIQST (tr|A6YAL1) RNA polymerase beta' subunit (Fragment)... 127 5e-28
A9XW65_CORFO (tr|A9XW65) DNA-directed RNA polymerase OS=Cornus f... 126 7e-28
A1XK47_CORFO (tr|A1XK47) RNA polymerase beta chain (Fragment) OS... 126 1e-27
A9XWB8_9ROSI (tr|A9XWB8) DNA-directed RNA polymerase (Fragment) ... 125 1e-27
A6YAK0_CERJA (tr|A6YAK0) RNA polymerase beta' subunit (Fragment)... 125 1e-27
A9XW47_9ROSI (tr|A9XW47) DNA-directed RNA polymerase (Fragment) ... 125 2e-27
B5LMM6_CICAR (tr|B5LMM6) DNA-directed RNA polymerase OS=Cicer ar... 125 2e-27
A6YAL7_9MAGN (tr|A6YAL7) RNA polymerase beta' subunit (Fragment)... 125 2e-27
A1XK46_CERCN (tr|A1XK46) RNA polymerase beta chain (Fragment) OS... 124 2e-27
A6YAK2_9MAGN (tr|A6YAK2) RNA polymerase beta' subunit (Fragment)... 124 3e-27
A9XW92_9ROSI (tr|A9XW92) DNA-directed RNA polymerase (Fragment) ... 124 3e-27
A9XW71_9ROSI (tr|A9XW71) DNA-directed RNA polymerase (Fragment) ... 124 3e-27
A9XW58_9ROSA (tr|A9XW58) DNA-directed RNA polymerase (Fragment) ... 124 3e-27
A9XWB5_9ROSA (tr|A9XWB5) DNA-directed RNA polymerase (Fragment) ... 124 3e-27
A1XK60_9CARY (tr|A1XK60) RNA polymerase beta chain (Fragment) OS... 124 3e-27
A9XW86_9ROSI (tr|A9XW86) DNA-directed RNA polymerase (Fragment) ... 124 4e-27
A9XWA1_9ROSI (tr|A9XWA1) DNA-directed RNA polymerase (Fragment) ... 124 5e-27
A9XW78_9MAGN (tr|A9XW78) DNA-directed RNA polymerase OS=Gunnera ... 122 1e-26
A9XWA5_9ROSI (tr|A9XWA5) DNA-directed RNA polymerase (Fragment) ... 122 1e-26
D3WBK9_9AQUA (tr|D3WBK9) DNA-directed RNA polymerase OS=Ilex cor... 122 1e-26
D3WB51_DILIN (tr|D3WB51) DNA-directed RNA polymerase OS=Dillenia... 122 1e-26
A1XK53_9AQUA (tr|A1XK53) RNA polymerase beta chain (Fragment) OS... 122 1e-26
A6YAK1_9MAGN (tr|A6YAK1) RNA polymerase beta' subunit (Fragment)... 122 1e-26
A1XK10_BUXSE (tr|A1XK10) RNA polymerase beta chain (Fragment) OS... 122 2e-26
A1XK62_DILIN (tr|A1XK62) RNA polymerase beta chain (Fragment) OS... 122 2e-26
A9XW49_9ROSI (tr|A9XW49) DNA-directed RNA polymerase (Fragment) ... 122 2e-26
A1XK54_HEDHE (tr|A1XK54) RNA polymerase beta chain (Fragment) OS... 121 2e-26
A9XW68_CUPAN (tr|A9XW68) DNA-directed RNA polymerase (Fragment) ... 121 2e-26
A9XW85_9ROSI (tr|A9XW85) DNA-directed RNA polymerase (Fragment) ... 121 3e-26
A1XKE1_9MAGN (tr|A1XKE1) RNA polymerase beta chain (Fragment) OS... 120 4e-26
A9XWA9_9ROSI (tr|A9XWA9) DNA-directed RNA polymerase OS=Quercus ... 120 4e-26
A6YAL5_9MAGN (tr|A6YAL5) RNA polymerase beta' subunit (Fragment)... 120 4e-26
A9XW56_CAPFL (tr|A9XW56) DNA-directed RNA polymerase (Fragment) ... 120 4e-26
A9XW63_9ROSI (tr|A9XW63) DNA-directed RNA polymerase (Fragment) ... 120 5e-26
D2KLS8_OLEEU (tr|D2KLS8) DNA-directed RNA polymerase OS=Olea eur... 120 5e-26
A6YAL6_9MAGN (tr|A6YAL6) RNA polymerase beta' subunit (Fragment)... 120 5e-26
D3WAX2_AUCJA (tr|D3WAX2) DNA-directed RNA polymerase OS=Aucuba j... 120 5e-26
A6YAK9_9MAGN (tr|A6YAK9) RNA polymerase beta' subunit (Fragment)... 120 7e-26
A1XK98_HAMMO (tr|A1XK98) RNA polymerase beta chain (Fragment) OS... 119 7e-26
A6YAK7_HAMJA (tr|A6YAK7) RNA polymerase beta' subunit (Fragment)... 119 8e-26
A9XW94_9MYRT (tr|A9XW94) DNA-directed RNA polymerase (Fragment) ... 119 8e-26
A9XW89_JUGNI (tr|A9XW89) DNA-directed RNA polymerase (Fragment) ... 119 1e-25
A6YAL4_9MAGN (tr|A6YAL4) RNA polymerase beta' subunit (Fragment)... 119 1e-25
A9XWC8_9ROSI (tr|A9XWC8) DNA-directed RNA polymerase (Fragment) ... 119 1e-25
A1XK06_9ROSI (tr|A1XK06) RNA polymerase beta chain (Fragment) OS... 118 2e-25
A9XW60_CEPFO (tr|A9XW60) DNA-directed RNA polymerase (Fragment) ... 117 4e-25
A1XK09_PACPR (tr|A1XK09) RNA polymerase beta chain (Fragment) OS... 117 6e-25
A9XWC5_TROAR (tr|A9XWC5) DNA-directed RNA polymerase OS=Trochode... 116 7e-25
A1XK08_9MAGN (tr|A1XK08) RNA polymerase beta chain (Fragment) OS... 116 8e-25
A1XK48_9ERIC (tr|A1XK48) RNA polymerase beta chain (Fragment) OS... 116 8e-25
A1XK11_TROAR (tr|A1XK11) RNA polymerase beta chain (Fragment) OS... 116 9e-25
D3WBD0_9BORA (tr|D3WBD0) DNA-directed RNA polymerase OS=Ehretia ... 116 9e-25
D3WC95_NELNU (tr|D3WC95) DNA-directed RNA polymerase OS=Nelumbo ... 115 1e-24
D3WC16_9MAGN (tr|D3WC16) DNA-directed RNA polymerase OS=Meliosma... 115 2e-24
A1XK17_NELNU (tr|A1XK17) RNA polymerase beta chain (Fragment) OS... 115 2e-24
A1XK97_SIMCH (tr|A1XK97) RNA polymerase beta chain (Fragment) OS... 115 2e-24
A9XW57_CARPA (tr|A9XW57) DNA-directed RNA polymerase (Fragment) ... 115 2e-24
B8R492_TRISU (tr|B8R492) DNA-directed RNA polymerase OS=Trifoliu... 114 3e-24
A1XK13_9MAGN (tr|A1XK13) RNA polymerase beta chain (Fragment) OS... 114 4e-24
A9XW90_9ROSI (tr|A9XW90) DNA-directed RNA polymerase (Fragment) ... 114 4e-24
A9XWC6_TROMA (tr|A9XWC6) DNA-directed RNA polymerase (Fragment) ... 114 4e-24
D5MAS6_LATSA (tr|D5MAS6) DNA-directed RNA polymerase OS=Lathyrus... 114 5e-24
B7T486_9ROSI (tr|B7T486) DNA-directed RNA polymerase OS=Pelargon... 113 6e-24
A9XW50_BIXOR (tr|A9XW50) DNA-directed RNA polymerase (Fragment) ... 113 8e-24
A9XWA2_9ROSI (tr|A9XWA2) DNA-directed RNA polymerase OS=Oxalis l... 112 9e-24
D3WCW5_RHOSS (tr|D3WCW5) DNA-directed RNA polymerase OS=Rhododen... 112 1e-23
B5AGZ9_9ROSI (tr|B5AGZ9) DNA-directed RNA polymerase OS=Gonystyl... 112 1e-23
A9XWB9_9FABA (tr|A9XWB9) DNA-directed RNA polymerase (Fragment) ... 112 1e-23
A1XKD0_9ROSI (tr|A1XKD0) RNA polymerase beta chain (Fragment) OS... 112 1e-23
A9XW83_9ROSI (tr|A9XW83) DNA-directed RNA polymerase (Fragment) ... 112 1e-23
A9XW98_9MYRT (tr|A9XW98) DNA-directed RNA polymerase (Fragment) ... 112 1e-23
D5MAK5_PEA (tr|D5MAK5) DNA-directed RNA polymerase OS=Pisum sati... 112 1e-23
B7T3U5_9ROSI (tr|B7T3U5) DNA-directed RNA polymerase OS=Monsonia... 112 1e-23
A9QAX6_9APIA (tr|A9QAX6) DNA-directed RNA polymerase (Fragment) ... 112 2e-23
A1XK22_AKEQU (tr|A1XK22) RNA polymerase beta chain (Fragment) OS... 112 2e-23
A1XK51_TOBAC (tr|A1XK51) RNA polymerase beta chain (Fragment) OS... 112 2e-23
A9XWC4_9ROSI (tr|A9XWC4) DNA-directed RNA polymerase (Fragment) ... 111 3e-23
D3WBT7_LONJA (tr|D3WBT7) DNA-directed RNA polymerase OS=Lonicera... 111 3e-23
A9XW74_9ROSI (tr|A9XW74) DNA-directed RNA polymerase OS=Euonymus... 110 4e-23
A9XW51_BREMA (tr|A9XW51) DNA-directed RNA polymerase (Fragment) ... 110 4e-23
A1XK61_MAHBE (tr|A1XK61) RNA polymerase beta chain (Fragment) OS... 110 4e-23
B7T416_9ROSI (tr|B7T416) DNA-directed RNA polymerase OS=Monsonia... 110 5e-23
A6YAL8_RIBAM (tr|A6YAL8) RNA polymerase beta' subunit (Fragment)... 110 5e-23
D7P2Y0_SYZCU (tr|D7P2Y0) RNA polymerase beta' subunit OS=Syzygiu... 110 5e-23
A9XW84_9ROSI (tr|A9XW84) DNA-directed RNA polymerase (Fragment) ... 110 6e-23
D3WCH4_NEROL (tr|D3WCH4) DNA-directed RNA polymerase OS=Nerium o... 110 7e-23
D3WD31_XIMAM (tr|D3WD31) DNA-directed RNA polymerase OS=Ximenia ... 109 9e-23
A1XK16_PLAOC (tr|A1XK16) RNA polymerase beta chain (Fragment) OS... 109 1e-22
A1XK19_XANSI (tr|A1XK19) RNA polymerase beta chain (Fragment) OS... 109 1e-22
A9XWA8_9MYRT (tr|A9XWA8) DNA-directed RNA polymerase (Fragment) ... 108 2e-22
A9XW80_HEUSA (tr|A9XW80) DNA-directed RNA polymerase OS=Heuchera... 108 2e-22
A9XWB2_9ROSI (tr|A9XWB2) DNA-directed RNA polymerase (Fragment) ... 108 2e-22
A1XK45_9MAGN (tr|A1XK45) RNA polymerase beta chain (Fragment) OS... 108 3e-22
A6YAK8_HEUMI (tr|A6YAK8) RNA polymerase beta' subunit (Fragment)... 107 3e-22
A9XW76_FLOPR (tr|A9XW76) DNA-directed RNA polymerase (Fragment) ... 107 3e-22
A9XW70_9ROSA (tr|A9XW70) DNA-directed RNA polymerase (Fragment) ... 107 3e-22
A9XW99_9ROSI (tr|A9XW99) DNA-directed RNA polymerase (Fragment) ... 107 4e-22
D3WAP3_ANTMA (tr|D3WAP3) DNA-directed RNA polymerase OS=Antirrhi... 107 4e-22
A1XK65_9MAGN (tr|A1XK65) RNA polymerase beta chain (Fragment) OS... 107 4e-22
A1XK43_9CARY (tr|A1XK43) RNA polymerase beta chain (Fragment) OS... 107 4e-22
B7T312_EROTE (tr|B7T312) DNA-directed RNA polymerase OS=Erodium ... 107 6e-22
C3UNW2_9MAGN (tr|C3UNW2) DNA-directed RNA polymerase OS=Megalera... 107 6e-22
A1XKA7_COFAR (tr|A1XKA7) RNA polymerase beta chain (Fragment) OS... 106 7e-22
A1XKD7_9MAGN (tr|A1XKD7) RNA polymerase beta chain (Fragment) OS... 106 8e-22
A6YAL9_SAXIN (tr|A6YAL9) RNA polymerase beta' subunit (Fragment)... 106 8e-22
A1XKE0_9MAGN (tr|A1XKE0) RNA polymerase beta chain (Fragment) OS... 106 1e-21
A1XK99_9ROSI (tr|A1XK99) RNA polymerase beta chain (Fragment) OS... 106 1e-21
A9XW97_MYRCE (tr|A9XW97) DNA-directed RNA polymerase (Fragment) ... 105 1e-21
A9XW91_LEEGU (tr|A9XW91) DNA-directed RNA polymerase (Fragment) ... 105 1e-21
A1XK44_PHYAM (tr|A1XK44) RNA polymerase beta chain (Fragment) OS... 105 1e-21
A1XK07_LEEGU (tr|A1XK07) RNA polymerase beta chain (Fragment) OS... 105 2e-21
A1XK42_MAGTR (tr|A1XK42) RNA polymerase beta chain (Fragment) OS... 104 2e-21
A1XK41_LIRCH (tr|A1XK41) RNA polymerase beta chain (Fragment) OS... 104 3e-21
A9XWA7_POLCR (tr|A9XWA7) RNA polymerase beta'' subunit (Fragment... 104 3e-21
A9XWA6_PLUAU (tr|A9XWA6) DNA-directed RNA polymerase OS=Plumbago... 104 4e-21
A1XKA6_OENOR (tr|A1XKA6) RNA polymerase beta chain (Fragment) OS... 104 4e-21
A1XK20_9MAGN (tr|A1XK20) RNA polymerase beta chain (Fragment) OS... 103 6e-21
A9XW55_CANSA (tr|A9XW55) DNA-directed RNA polymerase (Fragment) ... 103 7e-21
A9XWC7_9ROSA (tr|A9XWC7) DNA-directed RNA polymerase (Fragment) ... 103 8e-21
A9QC90_TRACE (tr|A9QC90) DNA-directed RNA polymerase (Fragment) ... 103 8e-21
A6YAK6_9MAGN (tr|A6YAK6) RNA polymerase beta' subunit (Fragment)... 103 9e-21
A6YAL3_9MAGN (tr|A6YAL3) RNA polymerase beta' subunit (Fragment)... 102 1e-20
A1XK12_9MAGN (tr|A1XK12) RNA polymerase beta chain (Fragment) OS... 102 2e-20
Q4FFY7_RANMC (tr|Q4FFY7) DNA-directed RNA polymerase (Fragment) ... 102 2e-20
A9QBM2_MUSAC (tr|A9QBM2) DNA-directed RNA polymerase (Fragment) ... 102 2e-20
A1XK18_9MAGN (tr|A1XK18) RNA polymerase beta chain (Fragment) OS... 102 2e-20
A1XK36_TASIN (tr|A1XK36) RNA polymerase beta chain (Fragment) OS... 102 2e-20
A6YAL2_9MAGN (tr|A6YAL2) RNA polymerase beta' subunit (Fragment)... 101 2e-20
A9XW43_ALNVI (tr|A9XW43) DNA-directed RNA polymerase (Fragment) ... 101 2e-20
A9XWA3_PARPL (tr|A9XWA3) DNA-directed RNA polymerase (Fragment) ... 101 3e-20
A9XW79_9ROSI (tr|A9XW79) DNA-directed RNA polymerase (Fragment) ... 100 5e-20
A9XWD0_9ROSA (tr|A9XWD0) DNA-directed RNA polymerase (Fragment) ... 100 6e-20
A1XKE6_9MAGN (tr|A1XKE6) RNA polymerase beta chain (Fragment) OS... 100 7e-20
A1XK37_DRIWI (tr|A1XK37) RNA polymerase beta chain (Fragment) OS... 100 7e-20
D3J8G5_9FABA (tr|D3J8G5) DNA-directed RNA polymerase OS=Vigna ra... 100 8e-20
A1XK14_9MAGN (tr|A1XK14) RNA polymerase beta chain (Fragment) OS... 100 9e-20
A1XK34_9MAGN (tr|A1XK34) RNA polymerase beta chain (Fragment) OS... 100 1e-19
A1XK15_9MAGN (tr|A1XK15) RNA polymerase beta chain (Fragment) OS... 99 1e-19
A9XW59_9ROSA (tr|A9XW59) DNA-directed RNA polymerase (Fragment) ... 99 1e-19
A9XW61_9MYRT (tr|A9XW61) DNA-directed RNA polymerase (Fragment) ... 99 1e-19
A1XK76_9LILI (tr|A1XK76) RNA polymerase beta chain (Fragment) OS... 99 1e-19
A1XK21_9MAGN (tr|A1XK21) RNA polymerase beta chain (Fragment) OS... 99 1e-19
A1XK52_9LAMI (tr|A1XK52) RNA polymerase beta chain (Fragment) OS... 99 2e-19
A1XKE9_PASSB (tr|A1XKE9) RNA polymerase beta chain (Fragment) OS... 98 4e-19
A6YAJ9_9MAGN (tr|A6YAJ9) RNA polymerase beta' subunit (Fragment)... 97 5e-19
A1XK40_9MAGN (tr|A1XK40) RNA polymerase beta chain (Fragment) OS... 97 5e-19
A1XKE3_CHLMT (tr|A1XKE3) RNA polymerase beta chain (Fragment) OS... 96 9e-19
A9XW75_9ROSA (tr|A9XW75) DNA-directed RNA polymerase OS=Ficus sp... 96 1e-18
A6YAM0_9MAGN (tr|A6YAM0) RNA polymerase beta' subunit (Fragment)... 96 1e-18
A1XK05_SPIOL (tr|A1XK05) RNA polymerase beta chain (Fragment) OS... 96 1e-18
A1XK92_9MAGN (tr|A1XK92) RNA polymerase beta chain (Fragment) OS... 96 1e-18
A1XK87_ARIMA (tr|A1XK87) RNA polymerase beta chain (Fragment) OS... 96 1e-18
A1XKE5_9MAGN (tr|A1XKE5) RNA polymerase beta chain (Fragment) OS... 96 1e-18
A1XK94_9MAGN (tr|A1XK94) RNA polymerase beta chain (Fragment) OS... 96 2e-18
A1XK33_9MAGN (tr|A1XK33) RNA polymerase beta chain (Fragment) OS... 95 2e-18
A1XKC9_9MAGN (tr|A1XKC9) RNA polymerase beta chain (Fragment) OS... 95 2e-18
Q4FFZ0_ACOAM (tr|Q4FFZ0) DNA-directed RNA polymerase (Fragment) ... 95 3e-18
A1XK67_9MAGN (tr|A1XK67) RNA polymerase beta chain (Fragment) OS... 95 3e-18
A1XK82_9ASPA (tr|A1XK82) RNA polymerase beta chain (Fragment) OS... 95 3e-18
A1XK23_9MAGN (tr|A1XK23) RNA polymerase beta chain (Fragment) OS... 95 3e-18
A1XK66_CALFL (tr|A1XK66) RNA polymerase beta chain (Fragment) OS... 94 3e-18
A1XK38_CANOD (tr|A1XK38) RNA polymerase beta chain (Fragment) OS... 94 4e-18
A9XW45_9ROSI (tr|A9XW45) DNA-directed RNA polymerase (Fragment) ... 94 5e-18
A1XK81_9POAL (tr|A1XK81) RNA polymerase beta chain (Fragment) OS... 93 9e-18
A1XK79_9POAL (tr|A1XK79) RNA polymerase beta chain (Fragment) OS... 93 1e-17
Q4FFY5_9ASPA (tr|Q4FFY5) DNA-directed RNA polymerase (Fragment) ... 93 1e-17
A1XKA4_9MAGN (tr|A1XKA4) RNA polymerase beta chain (Fragment) OS... 93 1e-17
A1XKD8_AGAAE (tr|A1XKD8) RNA polymerase beta chain (Fragment) OS... 92 1e-17
C7SM29_9POAL (tr|C7SM29) DNA-directed RNA polymerase (Fragment) ... 92 2e-17
A1XKC7_XANQU (tr|A1XKC7) RNA polymerase beta chain (Fragment) OS... 92 2e-17
B7T3F3_9ROSI (tr|B7T3F3) DNA-directed RNA polymerase OS=Geranium... 92 2e-17
A1XKA1_9MAGN (tr|A1XKA1) RNA polymerase beta chain (Fragment) OS... 92 2e-17
A1XKB7_GALBE (tr|A1XKB7) RNA polymerase beta chain (Fragment) OS... 92 2e-17
D4PBA1_PHODC (tr|D4PBA1) DNA-directed RNA polymerase OS=Phoenix ... 91 3e-17
A1XKA5_9MAGN (tr|A1XKA5) RNA polymerase beta chain (Fragment) OS... 91 3e-17
Q5QA61_ACOGR (tr|Q5QA61) RpoC2 (Fragment) OS=Acorus gramineus GN... 91 3e-17
A1XKA8_CINCA (tr|A1XKA8) RNA polymerase beta chain (Fragment) OS... 91 3e-17
A1XKD4_MYRFG (tr|A1XKD4) RNA polymerase beta chain (Fragment) OS... 91 3e-17
A1XKA3_9LILI (tr|A1XKA3) RNA polymerase beta chain (Fragment) OS... 91 3e-17
A1XKF2_9MAGN (tr|A1XKF2) RNA polymerase beta chain (Fragment) OS... 91 3e-17
A1XKF3_9MAGN (tr|A1XKF3) RNA polymerase beta chain (Fragment) OS... 91 3e-17
A1XK30_ACOCL (tr|A1XK30) RNA polymerase beta chain (Fragment) OS... 91 3e-17
A1XK29_ACOGR (tr|A1XK29) RNA polymerase beta chain (Fragment) OS... 91 4e-17
A1XKF7_9MAGN (tr|A1XKF7) RNA polymerase beta chain (Fragment) OS... 91 4e-17
B7T3M4_9ROSI (tr|B7T3M4) DNA-directed RNA polymerase OS=Geranium... 91 5e-17
A1XKF4_9MAGN (tr|A1XKF4) RNA polymerase beta chain (Fragment) OS... 91 5e-17
A1XK78_SPAAM (tr|A1XK78) RNA polymerase beta chain (Fragment) OS... 91 6e-17
A1XKE4_SANCA (tr|A1XKE4) RNA polymerase beta chain (Fragment) OS... 90 6e-17
A1XKF6_9MAGN (tr|A1XKF6) RNA polymerase beta chain (Fragment) OS... 90 7e-17
A1XK56_OROAQ (tr|A1XK56) RNA polymerase beta chain (Fragment) OS... 90 7e-17
A1XK71_9LILI (tr|A1XK71) RNA polymerase beta chain (Fragment) OS... 90 8e-17
A1XKE8_9MAGN (tr|A1XKE8) RNA polymerase beta chain (Fragment) OS... 90 8e-17
B7T2U1_9ROSI (tr|B7T2U1) DNA-directed RNA polymerase OS=Erodium ... 90 9e-17
Q4FFY6_TYPLA (tr|Q4FFY6) DNA-directed RNA polymerase (Fragment) ... 89 1e-16
D3JJ78_TYPLA (tr|D3JJ78) DNA-directed RNA polymerase OS=Typha la... 89 1e-16
A1XKA0_CANWI (tr|A1XKA0) RNA polymerase beta chain (Fragment) OS... 89 1e-16
B7T382_9ROSI (tr|B7T382) DNA-directed RNA polymerase OS=Geranium... 89 2e-16
A1XK83_9ASPA (tr|A1XK83) RNA polymerase beta chain (Fragment) OS... 89 2e-16
A1XKE7_9MAGN (tr|A1XKE7) RNA polymerase beta chain (Fragment) OS... 88 3e-16
A1XK50_EUCUL (tr|A1XK50) RNA polymerase beta chain (Fragment) OS... 88 3e-16
A1XKC2_9MAGN (tr|A1XKC2) RNA polymerase beta chain (Fragment) OS... 88 3e-16
A1XK96_BEARE (tr|A1XK96) RNA polymerase beta chain (Fragment) OS... 88 4e-16
A1XK75_9LILI (tr|A1XK75) RNA polymerase beta chain (Fragment) OS... 87 4e-16
A1XKB6_9LILI (tr|A1XKB6) RNA polymerase beta chain (Fragment) OS... 87 5e-16
A9XW48_BATMA (tr|A9XW48) DNA-directed RNA polymerase (Fragment) ... 87 5e-16
A9QBC9_ELAOL (tr|A9QBC9) DNA-directed RNA polymerase (Fragment) ... 87 5e-16
A1XK72_ASPOF (tr|A1XK72) RNA polymerase beta chain (Fragment) OS... 87 5e-16
A1XKC4_ILLFL (tr|A1XKC4) RNA polymerase beta chain (Fragment) OS... 87 6e-16
A1XKC0_9MAGN (tr|A1XKC0) RNA polymerase beta chain (Fragment) OS... 87 6e-16
A1XKC8_9MAGN (tr|A1XKC8) RNA polymerase beta chain (Fragment) OS... 87 6e-16
A1XKC3_9LILI (tr|A1XKC3) RNA polymerase beta chain (Fragment) OS... 86 1e-15
D3J6H6_9POAL (tr|D3J6H6) DNA-directed RNA polymerase (Fragment) ... 86 1e-15
A1XK70_9LILI (tr|A1XK70) RNA polymerase beta chain (Fragment) OS... 86 1e-15
A6YAL0_KALDA (tr|A6YAL0) RNA polymerase beta' subunit (Fragment)... 86 2e-15
A9XWB1_9ROSI (tr|A9XWB1) DNA-directed RNA polymerase (Fragment) ... 86 2e-15
A1XKB1_9MAGN (tr|A1XKB1) RNA polymerase beta chain (Fragment) OS... 86 2e-15
A1XK69_9LILI (tr|A1XK69) RNA polymerase beta chain (Fragment) OS... 85 2e-15
A1XK88_ASACA (tr|A1XK88) RNA polymerase beta chain (Fragment) OS... 85 2e-15
A1XK89_SARHE (tr|A1XK89) RNA polymerase beta chain (Fragment) OS... 85 3e-15
A1XK39_ANNMU (tr|A1XK39) RNA polymerase beta chain (Fragment) OS... 85 3e-15
A1XKA9_9ROSI (tr|A1XKA9) RNA polymerase beta chain (Fragment) OS... 84 3e-15
C6GJ48_BAMOL (tr|C6GJ48) DNA-directed RNA polymerase OS=Bambusa ... 84 3e-15
C7BF65_DENLA (tr|C7BF65) DNA-directed RNA polymerase OS=Dendroca... 84 4e-15
A1XK55_HELAN (tr|A1XK55) RNA polymerase beta chain (Fragment) OS... 84 4e-15
A9XW77_9ROSI (tr|A9XW77) DNA-directed RNA polymerase (Fragment) ... 84 5e-15
A1XKB8_LACFR (tr|A1XKB8) RNA polymerase beta chain (Fragment) OS... 84 6e-15
A1XKC1_SCHSP (tr|A1XKC1) RNA polymerase beta chain (Fragment) OS... 82 2e-14
A1XK35_AMBTC (tr|A1XK35) RNA polymerase beta chain (Fragment) OS... 82 2e-14
A1XK24_BUTUM (tr|A1XK24) RNA polymerase beta chain (Fragment) OS... 81 4e-14
A1XK77_9LILI (tr|A1XK77) RNA polymerase beta chain (Fragment) OS... 81 5e-14
A1XK80_9LILI (tr|A1XK80) RNA polymerase beta chain (Fragment) OS... 80 5e-14
D1LGN2_ORYRU (tr|D1LGN2) RNA polymerase beta'' chain (Fragment) ... 80 6e-14
D1LGM9_ORYSI (tr|D1LGM9) RNA polymerase beta'' chain (Fragment) ... 80 6e-14
D1LGN9_ORYRU (tr|D1LGN9) RNA polymerase beta'' chain (Fragment) ... 80 6e-14
D1LGN6_ORYSA (tr|D1LGN6) RNA polymerase beta'' chain (Fragment) ... 80 6e-14
D1LGN5_ORYSJ (tr|D1LGN5) RNA polymerase beta'' chain (Fragment) ... 80 6e-14
D1LGP3_ORYSA (tr|D1LGP3) RNA polymerase beta'' chain (Fragment) ... 80 6e-14
D1LGP2_ORYSI (tr|D1LGP2) RNA polymerase beta'' chain (Fragment) ... 80 6e-14
C7J1G9_ORYSJ (tr|C7J1G9) Os04g0240100 protein (Fragment) OS=Oryz... 80 6e-14
D5HQF2_ANOMA (tr|D5HQF2) DNA-directed RNA polymerase OS=Anomochl... 80 6e-14
A1XK91_9ASPA (tr|A1XK91) RNA polymerase beta chain (Fragment) OS... 80 7e-14
B8AP84_ORYSI (tr|B8AP84) Putative uncharacterized protein OS=Ory... 80 7e-14
A1XKF5_9MAGN (tr|A1XKF5) RNA polymerase beta chain (Fragment) OS... 80 1e-13
A1XK63_9LILI (tr|A1XK63) RNA polymerase beta chain (Fragment) OS... 80 1e-13
B5ANL6_9POAL (tr|B5ANL6) DNA-directed RNA polymerase OS=Chasmant... 79 2e-13
A1XK68_IDIAU (tr|A1XK68) RNA polymerase beta chain (Fragment) OS... 79 2e-13
D5HQ82_ONCHC (tr|D5HQ82) DNA-directed RNA polymerase OS=Oncidium... 79 2e-13
A1XK95_ONCSH (tr|A1XK95) RNA polymerase beta chain (Fragment) OS... 79 2e-13
A1XKB3_9ARAE (tr|A1XKB3) RNA polymerase beta chain (Fragment) OS... 78 3e-13
A1XKD5_9LILI (tr|A1XKD5) RNA polymerase beta chain (Fragment) OS... 78 3e-13
A1XK90_TACCH (tr|A1XK90) RNA polymerase beta chain (Fragment) OS... 78 4e-13
A1XK64_SPAWA (tr|A1XK64) RNA polymerase beta chain (Fragment) OS... 77 4e-13
A1XK74_9LILI (tr|A1XK74) RNA polymerase beta chain (Fragment) OS... 77 4e-13
A1XKA2_9MAGN (tr|A1XKA2) RNA polymerase beta chain (Fragment) OS... 77 7e-13
D7KRC4_ARALY (tr|D7KRC4) RNA polymerase beta subunit-2 OS=Arabid... 77 7e-13
A1XK73_9LILI (tr|A1XK73) RNA polymerase beta chain (Fragment) OS... 76 1e-12
A1XK58_9MAGN (tr|A1XK58) RNA polymerase beta chain (Fragment) OS... 76 1e-12
A1XK84_ALLCE (tr|A1XK84) RNA polymerase beta chain (Fragment) OS... 75 3e-12
A1XK27_ALIPL (tr|A1XK27) RNA polymerase beta chain (Fragment) OS... 74 4e-12
C5XLA4_SORBI (tr|C5XLA4) DNA-directed RNA polymerase OS=Sorghum ... 74 4e-12
C8XU09_COILA (tr|C8XU09) DNA-directed RNA polymerase OS=Coix lac... 74 5e-12
A1XK86_SAUCE (tr|A1XK86) RNA polymerase beta chain (Fragment) OS... 74 5e-12
C3KEF7_CERDE (tr|C3KEF7) DNA-directed RNA polymerase OS=Ceratoph... 74 5e-12
A6YAK3_9MAGN (tr|A6YAK3) RNA polymerase beta' subunit (Fragment)... 74 6e-12
A1XKC6_CERSB (tr|A1XKC6) RNA polymerase beta chain (Fragment) OS... 74 7e-12
A1XKC5_CERDE (tr|A1XKC5) RNA polymerase beta chain (Fragment) OS... 74 7e-12
A1XK25_XANMF (tr|A1XK25) RNA polymerase beta chain (Fragment) OS... 72 2e-11
A6YAM1_SEDRU (tr|A6YAM1) RNA polymerase beta' subunit (Fragment)... 72 2e-11
A9XW52_BULAR (tr|A9XW52) DNA-directed RNA polymerase OS=Bulnesia... 72 3e-11
D3WCP0_PHOSE (tr|D3WCP0) DNA-directed RNA polymerase OS=Phoraden... 71 3e-11
A1XK28_9LILI (tr|A1XK28) RNA polymerase beta chain (Fragment) OS... 70 7e-11
A1XK59_HYDMO (tr|A1XK59) RNA polymerase beta chain (Fragment) OS... 70 8e-11
B8Y2W6_FESAR (tr|B8Y2W6) DNA-directed RNA polymerase OS=Festuca ... 70 9e-11
A1XKD3_9MAGN (tr|A1XKD3) RNA polymerase beta chain (Fragment) OS... 69 1e-10
A1XK49_9ERIC (tr|A1XK49) RNA polymerase beta chain (Fragment) OS... 69 1e-10
D1L8M8_BRANA (tr|D1L8M8) DNA-directed RNA polymerase OS=Brassica... 69 2e-10
A1XK85_HOUCO (tr|A1XK85) RNA polymerase beta chain (Fragment) OS... 68 4e-10
A1XK57_9LILI (tr|A1XK57) RNA polymerase beta chain (Fragment) OS... 65 2e-09
A1XKB5_9MAGN (tr|A1XKB5) RNA polymerase beta chain (Fragment) OS... 63 8e-09
Q4FFY8_NUPAD (tr|Q4FFY8) DNA-directed RNA polymerase (Fragment) ... 63 1e-08
A1XK32_9MAGN (tr|A1XK32) RNA polymerase beta chain (Fragment) OS... 62 2e-08
A1XKB9_9LILI (tr|A1XKB9) RNA polymerase beta chain (Fragment) OS... 62 2e-08
A1XK26_9LILI (tr|A1XK26) RNA polymerase beta chain (Fragment) OS... 62 2e-08
A1XKD6_9LILI (tr|A1XKD6) RNA polymerase beta chain (Fragment) OS... 62 3e-08
A1XK31_BRASC (tr|A1XK31) RNA polymerase beta chain (Fragment) OS... 58 3e-07
A1XKB4_9MAGN (tr|A1XKB4) RNA polymerase beta chain (Fragment) OS... 55 2e-06
A1XKF9_9MAGN (tr|A1XKF9) RNA polymerase beta chain (Fragment) OS... 55 3e-06
>C0LE64_9ROSI (tr|C0LE64) DNA-directed RNA polymerase OS=Jatropha curcas GN=rpoC2
PE=3 SV=1
Length = 1394
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/85 (100%), Positives = 85/85 (100%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS
Sbjct: 877 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 936
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRMDP
Sbjct: 937 TLLNRNKECQSLIILSSSNCFRMDP 961
>A9XW95_MANES (tr|A9XW95) DNA-directed RNA polymerase (Fragment) OS=Manihot
esculenta GN=rpoC2 PE=3 SV=1
Length = 1281
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/85 (90%), Positives = 79/85 (92%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL K HISYI RKRNDPSGS PISNN SDRTNINPFYPIYSKTR+QQSLKQNQGTIS
Sbjct: 842 LRINLVKFHISYIGRKRNDPSGSEPISNNGSDRTNINPFYPIYSKTRVQQSLKQNQGTIS 901
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN NKECQSLIILSSSNCF+MDP
Sbjct: 902 TLLNINKECQSLIILSSSNCFQMDP 926
>A9XWA4_PHYCY (tr|A9XWA4) DNA-directed RNA polymerase (Fragment) OS=Phyllanthus
calycinus GN=rpoC2 PE=3 SV=1
Length = 1271
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/84 (90%), Positives = 80/84 (95%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINLAKS ISYISRKRNDPSGSG IS+N SDRTN+NPFY IYSK+RI+QSLKQNQGTIS
Sbjct: 834 LRINLAKSPISYISRKRNDPSGSGLISDNGSDRTNMNPFYSIYSKSRIKQSLKQNQGTIS 893
Query: 61 TLLNRNKECQSLIILSSSNCFRMD 84
TLLNRNKECQSLIILSSSNCFRMD
Sbjct: 894 TLLNRNKECQSLIILSSSNCFRMD 917
>A9XW72_9ROSI (tr|A9XW72) RNA polymerase beta'' subunit (Fragment) OS=Elatine
triandra GN=rpoC2 PE=4 SV=1
Length = 692
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/84 (86%), Positives = 78/84 (92%), Gaps = 1/84 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KSHISYISRKRNDPSGSG IS+NES+ TNINPFY +YSK RIQQSLK +QGTIS
Sbjct: 252 LRINLVKSHISYISRKRNDPSGSGLISDNESNPTNINPFYSLYSKARIQQSLK-SQGTIS 310
Query: 61 TLLNRNKECQSLIILSSSNCFRMD 84
TLLNRNKECQSLIILS+SNCFRMD
Sbjct: 311 TLLNRNKECQSLIILSASNCFRMD 334
>A9XW88_9ROSI (tr|A9XW88) DNA-directed RNA polymerase (Fragment) OS=Ixonanthes
icosandra x Ixonanthes cuneata GN=rpoC2 PE=3 SV=1
Length = 1262
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/85 (85%), Positives = 76/85 (89%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+INL KSHISYISRK NDPSGS IS++ SDRTNINPFY IYSKTRIQQSLKQNQG
Sbjct: 839 LKINLVKSHISYISRKGNDPSGSELISDHGSDRTNINPFYSIYSKTRIQQSLKQNQG--- 895
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRMDP
Sbjct: 896 TLLNRNKECQSLIILSSSNCFRMDP 920
>A9XWC1_9ROSI (tr|A9XWC1) DNA-directed RNA polymerase (Fragment) OS=Swietenia
macrophylla GN=rpoC2 PE=3 SV=1
Length = 1291
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KS ISYI RKRNDPSGSG IS+N SDRTNINPFY IY K R++QSL QNQGTI
Sbjct: 852 LRINLVKSQISYI-RKRNDPSGSGLISDNGSDRTNINPFYSIYFKARVEQSLSQNQGTIR 910
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSS+NCFRM P
Sbjct: 911 TLLNRNKECQSLIILSSANCFRMGP 935
>A9XW96_9ROSI (tr|A9XW96) DNA-directed RNA polymerase (Fragment) OS=Melianthus
comosus GN=rpoC2 PE=3 SV=1
Length = 1267
Score = 139 bits (351), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/85 (85%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI L KS ISYI RKR+DPSGSG IS+N SDRTNINPFY IYSKTRIQQSL QNQGTI
Sbjct: 830 LRIALVKSCISYI-RKRDDPSGSGLISDNGSDRTNINPFYSIYSKTRIQQSLSQNQGTIR 888
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 889 TLLNRNKECQSLIILSSSNCFRMGP 913
>A1XKB0_EUPMI (tr|A1XKB0) RNA polymerase beta chain (Fragment) OS=Euphorbia milii
var. splendens GN=rpoC2 PE=4 SV=1
Length = 814
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/87 (83%), Positives = 74/87 (85%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYIS---RKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQG 57
LRINL KS I YIS R RNDPSG GPISNN SD TNINPFYP YSK RIQQSLKQN G
Sbjct: 398 LRINLLKSKIFYISSRTRNRNDPSGLGPISNNGSDPTNINPFYPSYSKARIQQSLKQNHG 457
Query: 58 TISTLLNRNKECQSLIILSSSNCFRMD 84
TISTLLNRNKECQSL+ILSSSNCFRMD
Sbjct: 458 TISTLLNRNKECQSLLILSSSNCFRMD 484
>A9XWB6_9ROSI (tr|A9XWB6) DNA-directed RNA polymerase (Fragment) OS=Stachyurus
praecox GN=rpoC2 PE=3 SV=1
Length = 1280
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K HISYI RKRNDPS SG IS+N+SDRTNINPFY YSK RIQQSL QNQGTI
Sbjct: 841 LRIDLVKFHISYI-RKRNDPSSSGLISDNKSDRTNINPFYSSYSKARIQQSLDQNQGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 900 TLLNRNKECQSLIILSSSNCFRMGP 924
>A9XW53_9ROSI (tr|A9XW53) DNA-directed RNA polymerase (Fragment) OS=Bursera
simaruba GN=rpoC2 PE=3 SV=1
Length = 1274
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRNDPSGSG IS+N SDRTNINPFY IY K R+QQSL QNQGTI
Sbjct: 841 LRIDLVKSHISYI-RKRNDPSGSGLISDNGSDRTNINPFYSIYVKARVQQSLSQNQGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKE QSL+ILSSSNCFRM P
Sbjct: 900 TFLNRNKESQSLMILSSSNCFRMGP 924
>A9XW66_CROCA (tr|A9XW66) DNA-directed RNA polymerase (Fragment) OS=Crossosoma
californicum GN=rpoC2 PE=3 SV=1
Length = 1266
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K HISYI RKRNDPS SG IS+N+S RTNINPFY IYSK RIQQSL QNQGTI
Sbjct: 825 LRIDLVKFHISYI-RKRNDPSSSGLISDNKSGRTNINPFYSIYSKARIQQSLGQNQGTIR 883
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFR+ P
Sbjct: 884 TLLNRNKECQSLIILSSSNCFRIGP 908
>A1XKD9_9ROSI (tr|A1XKD9) RNA polymerase beta chain (Fragment) OS=Nothofagus
moorei GN=rpoC2 PE=4 SV=1
Length = 777
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKR DPSGSG IS+ SDRTNINPFY IYSKTRIQQSL QNQ TI
Sbjct: 354 LRIDLVKSHISYI-RKRKDPSGSGLISDTRSDRTNINPFYSIYSKTRIQQSLSQNQVTIR 412
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL ILSSSNCF+M P
Sbjct: 413 TLLNRNKECQSLTILSSSNCFQMGP 437
>A9XWC2_9ROSI (tr|A9XWC2) DNA-directed RNA polymerase (Fragment) OS=Tapiscia
sinensis GN=rpoC2 PE=3 SV=1
Length = 1280
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/85 (82%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRN+PSGSG IS N S+RTNINPFY IYSK RIQQSL QN GTI
Sbjct: 839 LRIDLVKSHISYI-RKRNNPSGSGLISANGSNRTNINPFYSIYSKARIQQSLSQNHGTIR 897
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL ILSSSNCFRM P
Sbjct: 898 TLLNRNKECQSLRILSSSNCFRMGP 922
>A9XWC0_9FABA (tr|A9XWC0) DNA-directed RNA polymerase (Fragment) OS=Suriana
maritima GN=rpoC2 PE=3 SV=1
Length = 1274
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSL--KQNQGT 58
LRI+L KSHISYI RKRND SGSG IS+NESDRTNINPFY IYSKT+IQQSL QN GT
Sbjct: 844 LRIDLVKSHISYI-RKRNDASGSGLISDNESDRTNINPFYSIYSKTKIQQSLSQSQNHGT 902
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I LLNRNKECQSLIILSSSNCF+M P
Sbjct: 903 IRMLLNRNKECQSLIILSSSNCFQMGP 929
>A9XWA0_9ROSI (tr|A9XWA0) DNA-directed RNA polymerase (Fragment) OS=Nitraria
retusa GN=rpoC2 PE=3 SV=1
Length = 1272
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+I+L KSHISYI RKRNDPSGSG IS+N D T INPFY IY K R+Q+SL QNQGTI
Sbjct: 833 LKIDLVKSHISYI-RKRNDPSGSGLISDNGLDHTKINPFYSIYFKVRVQESLSQNQGTIR 891
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T NRNKECQSLIILSSSNCFRMDP
Sbjct: 892 TWFNRNKECQSLIILSSSNCFRMDP 916
>A9XW82_9ROSI (tr|A9XW82) DNA-directed RNA polymerase (Fragment) OS=Hua gabonii
GN=rpoC2 PE=3 SV=1
Length = 1197
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISYI RKRNDPSGSG IS+N SDRTNINPFY YSK R+QQSL+QNQ TIS
Sbjct: 847 LRIDLVKSSISYI-RKRNDPSGSGRISDNGSDRTNINPFYSTYSKARVQQSLRQNQRTIS 905
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSS NCFR+ P
Sbjct: 906 TLLNRNKECQSLIILSSLNCFRLGP 930
>A9XWB7_9ROSI (tr|A9XWB7) DNA-directed RNA polymerase OS=Staphylea colchica
GN=rpoC2 PE=3 SV=1
Length = 1390
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K HISYI RKRNDPS SG IS+N+ D T INPFY IYSK RIQQSL QNQGTI
Sbjct: 872 LRIDLVKFHISYI-RKRNDPSSSGLISDNKLDCTKINPFYSIYSKARIQQSLGQNQGTIR 930
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 931 TLLNRNKECQSLIILSSSNCFRMGP 955
>A1XK93_STATR (tr|A1XK93) RNA polymerase beta chain (Fragment) OS=Staphylea
trifolia GN=rpoC2 PE=4 SV=1
Length = 866
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K HISYI RKRNDPS SG IS+N+ D T INPFY IYSK RIQQSL QNQGTI
Sbjct: 423 LRIDLVKFHISYI-RKRNDPSSSGLISDNQLDCTKINPFYSIYSKARIQQSLGQNQGTIR 481
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 482 TLLNRNKECQSLIILSSSNCFRMGP 506
>A9XW87_IXEBR (tr|A9XW87) DNA-directed RNA polymerase (Fragment) OS=Ixerba
brexioides GN=rpoC2 PE=3 SV=1
Length = 1283
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRND S SG IS+N S+RT INPFY IYSK R++QSL QNQGTI
Sbjct: 841 LRIDLVKSHISYI-RKRNDLSASGLISDNGSNRTKINPFYSIYSKARVKQSLSQNQGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 900 TLLNRNKECQSLIILSSSNCFRMGP 924
>A9XW46_9ROSI (tr|A9XW46) DNA-directed RNA polymerase (Fragment) OS=Aphloia
theiformis GN=rpoC2 PE=3 SV=1
Length = 1273
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS I YI RKRNDPSGSG ISNNES T+INPFY IY K RI+QSL QNQGTI
Sbjct: 841 LRIDLVKSPILYI-RKRNDPSGSGLISNNESGHTSINPFYSIYPKGRIKQSLSQNQGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 900 TLLNRNKECQSLIILSSSNCFRMGP 924
>A9XW40_9MAGN (tr|A9XW40) DNA-directed RNA polymerase OS=Berberidopsis corallina
GN=rpoC2 PE=3 SV=1
Length = 1389
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSGSG IS++ SDRTNINPFY IYSK RIQQSL QNQGTI
Sbjct: 872 LRIDLVKSPISY-TGKRNDPSGSGLISDSGSDRTNINPFYSIYSKARIQQSLSQNQGTIR 930
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 931 TLLNRNKECQSLIILSSSNCSRMGP 955
>A9XWB3_9ROSI (tr|A9XWB3) DNA-directed RNA polymerase (Fragment) OS=Schinus
terebinthifolius GN=rpoC2 PE=3 SV=1
Length = 1281
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRNDPSGSG IS+N SDR NINPFY I K R++Q L QNQGTI
Sbjct: 843 LRIDLVKSHISYI-RKRNDPSGSGLISDNGSDRNNINPFYCISCKARVEQLLSQNQGTIR 901
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL+ILSSSNCFRM P
Sbjct: 902 TLLNRNKECQSLMILSSSNCFRMGP 926
>A1XKF0_9MAGN (tr|A1XKF0) RNA polymerase beta chain (Fragment) OS=Berberidopsis
beckleri GN=rpoC2 PE=4 SV=1
Length = 829
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSGSG IS++ SDRTNINPFY IYSK RIQQSL QNQGTI
Sbjct: 389 LRIDLVKSPISY-TGKRNDPSGSGLISDSGSDRTNINPFYSIYSKARIQQSLSQNQGTIR 447
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 448 TLLNRNKECQSLIILSSSNCSRMGP 472
>A9XWB0_QUISA (tr|A9XWB0) DNA-directed RNA polymerase (Fragment) OS=Quillaja
saponaria GN=rpoC2 PE=3 SV=1
Length = 1313
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/86 (80%), Positives = 73/86 (84%), Gaps = 2/86 (2%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNIN-PFYPIYSKTRIQQSLKQNQGTI 59
LRI L KSHISYI RKRND SGSG IS+NESDRTNIN PFY IYSK +IQQSL QN GTI
Sbjct: 874 LRIGLVKSHISYI-RKRNDLSGSGLISDNESDRTNINNPFYSIYSKAKIQQSLSQNHGTI 932
Query: 60 STLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKEC+SLIILSSSNCF+M P
Sbjct: 933 RMLLNRNKECRSLIILSSSNCFQMGP 958
>A9XW64_9ROSI (tr|A9XW64) DNA-directed RNA polymerase (Fragment) OS=Coriaria
nepalensis GN=rpoC2 PE=3 SV=1
Length = 1283
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 75/88 (85%), Gaps = 4/88 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLK---QNQG 57
LRI+LAKSHISYI RKR DPSGSG ISNNESDRTNINPFY YSK R++QSL +NQG
Sbjct: 843 LRIDLAKSHISYI-RKRKDPSGSGLISNNESDRTNINPFYSTYSKARVEQSLTKNSKNQG 901
Query: 58 TISTLLNRNKECQSLIILSSSNCFRMDP 85
TI TLLN NKE +SLIILS+SNCF+MDP
Sbjct: 902 TIRTLLNSNKERKSLIILSASNCFQMDP 929
>A6YAJ8_9MAGN (tr|A6YAJ8) RNA polymerase beta' subunit (Fragment) OS=Altingia
excelsa GN=rpoC2 PE=4 SV=1
Length = 840
Score = 129 bits (325), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL +S ISY + KRNDPSGSG IS+N SDRTNINPFY YSK RIQQSL QNQGTI
Sbjct: 422 LRINLXESPISY-TGKRNDPSGSGWISDNGSDRTNINPFYSTYSKERIQQSLSQNQGTIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 481 TLLNRNKECQSLIILSSSNCSRMGP 505
>A6YAK5_9MAGN (tr|A6YAK5) RNA polymerase beta' subunit (Fragment) OS=Exbucklandia
populnea GN=rpoC2 PE=4 SV=1
Length = 802
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSGSG IS+N SDRTNINPFY YSK RIQQS QNQGTI
Sbjct: 384 LRIDLVKSPISY-TGKRNDPSGSGLISDNGSDRTNINPFYSTYSKARIQQSFSQNQGTIR 442
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 443 TLLNRNKECQSLIILSSSNCSRMGP 467
>A9XW73_EUCLU (tr|A9XW73) DNA-directed RNA polymerase (Fragment) OS=Eucryphia
lucida GN=rpoC2 PE=3 SV=1
Length = 1280
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 73/85 (85%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRNDPSGSG IS+N SD T INPFY SK IQQSL+QNQGTIS
Sbjct: 841 LRIDLVKSHISYI-RKRNDPSGSGLISDNGSDHTTINPFY---SKAGIQQSLRQNQGTIS 896
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILSSSNCFR+DP
Sbjct: 897 TLLNRNKEYQSLIILSSSNCFRIDP 921
>A9XWC3_TERCT (tr|A9XWC3) DNA-directed RNA polymerase (Fragment) OS=Terminalia
catappa GN=rpoC2 PE=3 SV=1
Length = 1274
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISY+ RKRNDPS SG S+N SD N NPFY IYSKT+IQ+SL QNQGTI
Sbjct: 836 LRIDLVKSHISYL-RKRNDPSSSGLSSDNVSDHINFNPFYSIYSKTKIQKSLSQNQGTIR 894
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN NKEC SLIILSSSNCFRMDP
Sbjct: 895 TLLNSNKECPSLIILSSSNCFRMDP 919
>A6YAK4_9MAGN (tr|A6YAK4) RNA polymerase beta' subunit (Fragment)
OS=Daphniphyllum sp. 205-82 GN=rpoC2 PE=4 SV=1
Length = 793
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSG G I+NN SDRTNINPFY YSK RIQQSL QNQGTI
Sbjct: 409 LRIDLVKSPISY-TGKRNDPSGLGLIANNGSDRTNINPFYSTYSKARIQQSLSQNQGTIR 467
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 468 TLLNRNKECQSLIILSSSNCSRMGP 492
>A9XW69_9ROSI (tr|A9XW69) DNA-directed RNA polymerase (Fragment) OS=Datisca
cannabina GN=rpoC2 PE=3 SV=1
Length = 1280
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISYI RKR DPSGSG ISNN+SDRTN NPFY YSK ++QQSL QNQGTI
Sbjct: 841 LRIDLVKSPISYI-RKRKDPSGSGLISNNKSDRTNNNPFYSSYSKAKVQQSLSQNQGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILS+SNCF+MDP
Sbjct: 900 TLLNRNKERQSLIILSASNCFQMDP 924
>A9XW41_AILAL (tr|A9XW41) DNA-directed RNA polymerase (Fragment) OS=Ailanthus
altissima GN=rpoC2 PE=3 SV=1
Length = 1279
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 71/87 (81%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQ--GT 58
LRIN KSHISYI RKRNDPSGSG IS+N S RTNINPFY IY K R ++S QNQ GT
Sbjct: 848 LRINFMKSHISYI-RKRNDPSGSGLISDNGSARTNINPFYSIYFKARGEKSFSQNQNQGT 906
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 907 IRTLLNRNKECQSLIILSSSNCFRMGP 933
>A9XW93_LIQST (tr|A9XW93) DNA-directed RNA polymerase OS=Liquidambar styraciflua
GN=rpoC2 PE=3 SV=1
Length = 1390
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL +S ISY + KRNDPSGSG IS+N SDRTNINPFY YSK RIQQSL QNQGTI
Sbjct: 874 LRINLVESPISY-TGKRNDPSGSGWISDNGSDRTNINPFYSTYSKERIQQSLSQNQGTIR 932
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL ILSSSNC RM P
Sbjct: 933 TLLNRNKECQSLRILSSSNCSRMGP 957
>A9XW67_9MYRT (tr|A9XW67) DNA-directed RNA polymerase (Fragment) OS=Crypteronia
paniculata GN=rpoC2 PE=3 SV=1
Length = 1004
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHI Y+ RKRN PSGSG IS+N SD TNINPFY IYSK +IQQSL QNQGTI
Sbjct: 841 LRIDLVKSHIPYL-RKRNHPSGSGSISDNVSDHTNINPFYSIYSKIKIQQSLSQNQGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+N+EC SLI LSSSNCFRM P
Sbjct: 900 TLLNQNRECPSLISLSSSNCFRMGP 924
>A6YAL1_LIQST (tr|A6YAL1) RNA polymerase beta' subunit (Fragment) OS=Liquidambar
styraciflua GN=rpoC2 PE=4 SV=1
Length = 830
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL +S ISY + KRNDPSGSG IS+N SDRTNINPFY YSK RIQQSL QNQGTI
Sbjct: 407 LRINLVESPISY-TGKRNDPSGSGWISDNGSDRTNINPFYSTYSKERIQQSLSQNQGTIR 465
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL ILSSSNC RM P
Sbjct: 466 TLLNRNKECQSLRILSSSNCSRMGP 490
>A9XW65_CORFO (tr|A9XW65) DNA-directed RNA polymerase OS=Cornus florida GN=rpoC2
PE=3 SV=1
Length = 1391
Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY S KRNDPSGSG IS N SDRTNINPF IYSK +IQQSL QNQGTI
Sbjct: 872 LRIDLVKSPISYTS-KRNDPSGSGLISENGSDRTNINPFSSIYSKAKIQQSLNQNQGTIH 930
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC +M P
Sbjct: 931 TLLNRNKECQSLIILSSSNCSQMGP 955
>A1XK47_CORFO (tr|A1XK47) RNA polymerase beta chain (Fragment) OS=Cornus florida
GN=rpoC2 PE=4 SV=1
Length = 812
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY S KRNDPSGSG IS N SDRTNINPF IYSK +IQQSL QNQGTI
Sbjct: 369 LRIDLVKSPISYTS-KRNDPSGSGLISENGSDRTNINPFSSIYSKAKIQQSLNQNQGTIH 427
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC +M P
Sbjct: 428 TLLNRNKECQSLIILSSSNCSQMGP 452
>A9XWB8_9ROSI (tr|A9XWB8) DNA-directed RNA polymerase (Fragment) OS=Strasburgeria
robusta GN=rpoC2 PE=3 SV=1
Length = 1281
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRND SGSG IS+N S+RT INPFY SK RI+QSL QNQGT+
Sbjct: 840 LRIDLVKSHISYI-RKRNDLSGSGLISDNGSNRTKINPFY---SKARIKQSLSQNQGTVR 895
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 896 TLLNRNKECQSLIILSSSNCFRMGP 920
>A6YAK0_CERJA (tr|A6YAK0) RNA polymerase beta' subunit (Fragment)
OS=Cercidiphyllum japonicum GN=rpoC2 PE=4 SV=1
Length = 798
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSGSG I +N SDRTNINPFY YSK RIQQSL QNQGTI
Sbjct: 422 LRIDLVKSPISY-TGKRNDPSGSGLIYDNGSDRTNINPFYSTYSKARIQQSLSQNQGTIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQSLIILSSSNC RM
Sbjct: 481 TLLNRNKECQSLIILSSSNCSRM 503
>A9XW47_9ROSI (tr|A9XW47) DNA-directed RNA polymerase (Fragment) OS=Atuna
racemosa GN=rpoC2 PE=3 SV=1
Length = 1279
Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 71/84 (84%), Gaps = 3/84 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KS ISYISRKRNDPSGSG +S+N DR NINPF +YSK R SLK+NQGT+S
Sbjct: 844 LRINLMKSPISYISRKRNDPSGSGLVSDNGLDRPNINPFSSVYSKAR---SLKKNQGTLS 900
Query: 61 TLLNRNKECQSLIILSSSNCFRMD 84
TLLNRN ECQSL+ILSSSNCFRMD
Sbjct: 901 TLLNRNNECQSLMILSSSNCFRMD 924
>B5LMM6_CICAR (tr|B5LMM6) DNA-directed RNA polymerase OS=Cicer arietinum GN=rpoC2
PE=3 SV=1
Length = 1376
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KSH+SYI RKRNDPSG G I + ESDR NINPF+ I+SKT+IQQSL QN GTI
Sbjct: 870 IRIDLVKSHMSYI-RKRNDPSGLGLIPDKESDRVNINPFFSIHSKTKIQQSLIQNHGTIR 928
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKEC+S IILSSSNCF+M P
Sbjct: 929 MLLNRNKECRSWIILSSSNCFQMRP 953
>A6YAL7_9MAGN (tr|A6YAL7) RNA polymerase beta' subunit (Fragment) OS=Rhodoleia
championii GN=rpoC2 PE=4 SV=1
Length = 813
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS I Y + KRNDPSGSG IS+N SDRTNINPFY YSK RIQQS QN+GTI
Sbjct: 399 LRIDLVKSPILY-TGKRNDPSGSGLISDNGSDRTNINPFYSTYSKARIQQSFSQNRGTIR 457
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 458 TLLNRNKECQSLIILSSSNCSRMGP 482
>A1XK46_CERCN (tr|A1XK46) RNA polymerase beta chain (Fragment) OS=Cercis
canadensis GN=rpoC2 PE=4 SV=1
Length = 864
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRNDPS SG IS+NESD TNINPFY IYSK +I QSL QN GTI
Sbjct: 422 LRIDLVKSHISYI-RKRNDPSSSGLISDNESDCTNINPFYSIYSKAKIPQSLSQNHGTIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
L RNKEC+SLIILSSSNCF+M P
Sbjct: 481 MSLTRNKECRSLIILSSSNCFQMGPV 506
>A6YAK2_9MAGN (tr|A6YAK2) RNA polymerase beta' subunit (Fragment) OS=Corylopsis
pauciflora GN=rpoC2 PE=4 SV=1
Length = 821
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L IBL KS ISY + KRNDPSGSG IS+N SDRTNINPFY YSK RIQQSL QNQG I
Sbjct: 404 LXIBLXKSPISY-TGKRNDPSGSGLISDNGSDRTNINPFYSTYSKARIQQSLSQNQGIIR 462
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKECQSLIILSSSNC RM P
Sbjct: 463 ALLNRNKECQSLIILSSSNCSRMGP 487
>A9XW92_9ROSI (tr|A9XW92) DNA-directed RNA polymerase (Fragment) OS=Leonia
glycycarpa GN=rpoC2 PE=3 SV=1
Length = 1274
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 71/89 (79%), Gaps = 5/89 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSL---KQNQG 57
LRINL KSH YISRKRN PS SG IS+N DRTNINPFY +YSK RIQQSL K+NQG
Sbjct: 839 LRINLVKSHFFYISRKRNGPSSSGSISDNGLDRTNINPFYFLYSKARIQQSLKKKKKNQG 898
Query: 58 TISTLL--NRNKECQSLIILSSSNCFRMD 84
T STLL NRNKECQSL ILSSSNCFR D
Sbjct: 899 TFSTLLNRNRNKECQSLGILSSSNCFRXD 927
>A9XW71_9ROSI (tr|A9XW71) DNA-directed RNA polymerase (Fragment) OS=Elaeocarpus
angustifolius GN=rpoC2 PE=3 SV=1
Length = 1263
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHI YI RKRNDPSGSG I +N SDRTNINPFY SK IQQSL++NQGTIS
Sbjct: 837 LRIDLVKSHILYI-RKRNDPSGSGLIFDNGSDRTNINPFY---SKAGIQQSLRKNQGTIS 892
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILSSSNCFR+ P
Sbjct: 893 TLLNRNKEYQSLIILSSSNCFRIGP 917
>A9XW58_9ROSA (tr|A9XW58) DNA-directed RNA polymerase (Fragment) OS=Ceanothus
prostratus GN=rpoC2 PE=3 SV=1
Length = 1281
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 71/85 (83%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KSHISYI RKRNDP GSG IS+N S+RTN PFY IYSK RIQQSL QNQGTI
Sbjct: 846 LRINLVKSHISYI-RKRNDPLGSGLISDNRSNRTN--PFYSIYSKERIQQSLSQNQGTIR 902
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR+KE QSLIILSS NCF+M P
Sbjct: 903 TLLNRSKESQSLIILSSFNCFQMGP 927
>A9XWB5_9ROSA (tr|A9XWB5) DNA-directed RNA polymerase (Fragment) OS=Spiraea
tomentosa GN=rpoC2 PE=3 SV=1
Length = 1264
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KS SYI RKRNDP GSG I +N SDRTNINPFY IYSK RIQQS QNQGT
Sbjct: 836 LRINLVKSDTSYI-RKRNDPLGSGLIFDNSSDRTNINPFYSIYSKGRIQQSFSQNQGTFR 894
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR+KE QSLIILSS NCF+M P
Sbjct: 895 TLLNRSKESQSLIILSSYNCFQMSP 919
>A1XK60_9CARY (tr|A1XK60) RNA polymerase beta chain (Fragment) OS=Nepenthes sp.
'Kosobe' GN=rpoC2 PE=4 SV=1
Length = 856
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 67/85 (78%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+ KS ISY +KRNDPS SG I +N SDRTN NPFY IYSK R+QQS QN+GT
Sbjct: 420 LRIHFMKSTISYTKKKRNDPSDSGLIYDNGSDRTNRNPFYFIYSKARLQQSFSQNEGTFR 479
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS +ILSSSNCFRM P
Sbjct: 480 TLLNRNKECQSFLILSSSNCFRMGP 504
>A9XW86_9ROSI (tr|A9XW86) DNA-directed RNA polymerase (Fragment) OS=Irvingia
malayana GN=rpoC2 PE=3 SV=1
Length = 1083
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 73/85 (85%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+ ++L KSHIS I RKRN+PSGSG IS+N SD TNINPF IYSKT+IQQSLK+NQGT+S
Sbjct: 901 INLDLVKSHISCIRRKRNNPSGSGLISDNGSDCTNINPFCSIYSKTKIQQSLKKNQGTLS 960
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNK+CQS + LSSSNCFR DP
Sbjct: 961 TLLNRNKKCQSFLNLSSSNCFRTDP 985
>A9XWA1_9ROSI (tr|A9XWA1) DNA-directed RNA polymerase (Fragment) OS=Ochna
mossambicensis GN=rpoC2 PE=3 SV=1
Length = 1268
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 70/85 (82%), Gaps = 6/85 (7%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI K HISYISRKRNDPSGSG +S+N D T INPFY SK RIQQ LKQNQGTIS
Sbjct: 838 LRI---KCHISYISRKRNDPSGSGVLSDNGPDHTIINPFY---SKGRIQQLLKQNQGTIS 891
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILSSSNCFRMDP
Sbjct: 892 TLLNRNKERQSLIILSSSNCFRMDP 916
>A9XW78_9MAGN (tr|A9XW78) DNA-directed RNA polymerase OS=Gunnera manicata
GN=rpoC2 PE=3 SV=1
Length = 1386
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 71/87 (81%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQ--NQGT 58
LRI+L KS ISY + KRNDP+GSG IS+N SDRTNINPFY IYSK RIQQSL Q NQGT
Sbjct: 872 LRIDLVKSPISY-TGKRNDPAGSGLISDNGSDRTNINPFYSIYSKGRIQQSLSQNKNQGT 930
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQ +ILSSSNC RM P
Sbjct: 931 IRTLLNRNKECQFFLILSSSNCSRMGP 957
>A9XWA5_9ROSI (tr|A9XWA5) DNA-directed RNA polymerase (Fragment) OS=Picramnia
polyantha GN=rpoC2 PE=3 SV=1
Length = 1275
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Query: 1 LRIN--LAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGT 58
LRI+ L K HISY SRKRND S SG IS+N SDRTN+NPFY IY K RI QSL QNQGT
Sbjct: 833 LRIDVVLVKPHISY-SRKRNDLSSSGLISDNGSDRTNMNPFYSIYPKVRIPQSLSQNQGT 891
Query: 59 ISTLLNRNKECQSLIILSSSNCFRM 83
I TLLNRNKECQSLIILSSSNCFRM
Sbjct: 892 IRTLLNRNKECQSLIILSSSNCFRM 916
>D3WBK9_9AQUA (tr|D3WBK9) DNA-directed RNA polymerase OS=Ilex cornuta GN=rpoC2
PE=3 SV=1
Length = 1384
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 73/87 (83%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIY--SKTRIQQSLKQNQGT 58
LRI+L KS ISY +RKRNDPSG+G IS+N SDRTNINPF IY SK RIQ+SL QNQGT
Sbjct: 872 LRIDLVKSSISY-TRKRNDPSGAGLISDNGSDRTNINPFSFIYTYSKARIQESLNQNQGT 930
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I T+LN+NKECQSLIILSSSNC RM P
Sbjct: 931 IHTVLNKNKECQSLIILSSSNCSRMGP 957
>D3WB51_DILIN (tr|D3WB51) DNA-directed RNA polymerase OS=Dillenia indica GN=rpoC2
PE=3 SV=1
Length = 1370
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 71/83 (85%), Gaps = 3/83 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+LAKS ISY + KRNDPSGSG I +NESDR INPFY IYSK RIQ+SLKQNQGTI
Sbjct: 868 LRIDLAKSPISY-TGKRNDPSGSGLIFDNESDR--INPFYSIYSKARIQKSLKQNQGTIR 924
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
LLNRNKECQSLIILSSSNC RM
Sbjct: 925 ILLNRNKECQSLIILSSSNCSRM 947
>A1XK53_9AQUA (tr|A1XK53) RNA polymerase beta chain (Fragment) OS=Ilex sp. Qiu
94038 GN=rpoC2 PE=4 SV=1
Length = 866
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 73/87 (83%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIY--SKTRIQQSLKQNQGT 58
LRI+L KS ISY +RKRNDPSG+G IS+N SDRTNINPF IY SK RIQ+SL QNQGT
Sbjct: 423 LRIDLVKSSISY-TRKRNDPSGAGLISDNGSDRTNINPFSFIYTYSKARIQESLNQNQGT 481
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I T+LN+NKECQSLIILSSSNC RM P
Sbjct: 482 IHTVLNKNKECQSLIILSSSNCSRMGP 508
>A6YAK1_9MAGN (tr|A6YAK1) RNA polymerase beta' subunit (Fragment) OS=Choristylis
rhamnoides GN=rpoC2 PE=4 SV=1
Length = 800
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 71/85 (83%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K ISY +RKRNDPSGSG IS+N SDRTNINPFY SK RIQQSL QNQGTI
Sbjct: 400 LRIDLVKFPISY-TRKRNDPSGSGLISDNGSDRTNINPFY---SKARIQQSLSQNQGTIR 455
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC R+ P
Sbjct: 456 TLLNRNKECQSLIILSSSNCSRIGP 480
>A1XK10_BUXSE (tr|A1XK10) RNA polymerase beta chain (Fragment) OS=Buxus
sempervirens GN=rpoC2 PE=4 SV=1
Length = 865
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LR++L KS ISYI KRNDPS SG I +N SDR NINPFY IY K RIQQSL Q+QGTI
Sbjct: 424 LRMDLVKSPISYIV-KRNDPSSSGLIPDNGSDRNNINPFYSIYYKARIQQSLSQHQGTIR 482
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 483 TLLNRNKECQSLIILSSSNCSRMHP 507
>A1XK62_DILIN (tr|A1XK62) RNA polymerase beta chain (Fragment) OS=Dillenia indica
GN=rpoC2 PE=4 SV=1
Length = 854
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/83 (80%), Positives = 71/83 (85%), Gaps = 3/83 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+LAKS ISY + KRNDPSGSG I +NESDR INPFY IYSK RIQ+SLKQNQGTI
Sbjct: 406 LRIDLAKSPISY-TGKRNDPSGSGLIFDNESDR--INPFYSIYSKARIQKSLKQNQGTIR 462
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
LLNRNKECQSLIILSSSNC RM
Sbjct: 463 ILLNRNKECQSLIILSSSNCSRM 485
>A9XW49_9ROSI (tr|A9XW49) DNA-directed RNA polymerase (Fragment) OS=Begonia
cucullata GN=rpoC2 PE=3 SV=1
Length = 1312
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 71/87 (81%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKR DPSGSG I NNESD TN NP +YSK R+QQSL QNQGTI
Sbjct: 871 LRIDLVKSHISYI-RKREDPSGSGLIFNNESDYTNSNPLDSLYSKGRVQQSLSQNQGTIR 929
Query: 61 TLL--NRNKECQSLIILSSSNCFRMDP 85
TLL NRNKE QSLIILS+SNCF+MDP
Sbjct: 930 TLLNINRNKERQSLIILSASNCFQMDP 956
>A1XK54_HEDHE (tr|A1XK54) RNA polymerase beta chain (Fragment) OS=Hedera helix
GN=rpoC2 PE=4 SV=1
Length = 863
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 71/87 (81%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYP--IYSKTRIQQSLKQNQGT 58
L+I+LAKS ISY + KR DPSGSG IS N SDRTNINPF YSK RI++SL QNQGT
Sbjct: 420 LKIDLAKSPISY-TGKRKDPSGSGLISENGSDRTNINPFSSSFFYSKARIKESLNQNQGT 478
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 479 IHTLLNRNKECQSLIILSSSNCFRMGP 505
>A9XW68_CUPAN (tr|A9XW68) DNA-directed RNA polymerase (Fragment) OS=Cupaniopsis
anacardioides GN=rpoC2 PE=3 SV=1
Length = 1266
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L +SHISY+ RKRNDPS SG IS+N SDRTNINPFY +Y K R+ L QNQ T+
Sbjct: 843 LRIDLVQSHISYM-RKRNDPSSSGLISDNGSDRTNINPFYSLYFKARV--PLSQNQRTLH 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 900 TLLNRNKECQSLIILSSSNCFRMGP 924
>A9XW85_9ROSI (tr|A9XW85) DNA-directed RNA polymerase (Fragment) OS=Hypseocharis
bilobata GN=rpoC2 PE=3 SV=1
Length = 1276
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISYI RKRNDPSG G S+N DRTNINPF I SK RI+QSL +NQGTI
Sbjct: 843 LRIDLGKSKISYI-RKRNDPSGPGLTSDNRPDRTNINPFSSISSKARIRQSLSENQGTIR 901
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TL NRNKECQS IILSSSNCFR+ P
Sbjct: 902 TLWNRNKECQSFIILSSSNCFRLGP 926
>A1XKE1_9MAGN (tr|A1XKE1) RNA polymerase beta chain (Fragment) OS=Didymeles
perrieri GN=rpoC2 PE=4 SV=1
Length = 818
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LR++L KS ISY + KRNDPS SG I +N SDR NINPFY IY K RI QSL Q+QGTI
Sbjct: 377 LRMDLVKSPISY-NGKRNDPSSSGLIPDNGSDRNNINPFYSIYYKARIHQSLSQHQGTIR 435
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFR+ P
Sbjct: 436 TLLNRNKECQSLIILSSSNCFRISP 460
>A9XWA9_9ROSI (tr|A9XWA9) DNA-directed RNA polymerase OS=Quercus nigra GN=rpoC2
PE=3 SV=1
Length = 1396
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKR DPSGSG I + DRT+INPFY I SK IQQSL QNQ TI
Sbjct: 873 LRIDLVKSHISYI-RKRKDPSGSGLIFDKRPDRTSINPFYSISSKAGIQQSLSQNQVTIR 931
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLL RNKECQS IILSSSNCF+M P
Sbjct: 932 TLLKRNKECQSFIILSSSNCFQMGP 956
>A6YAL5_9MAGN (tr|A6YAL5) RNA polymerase beta' subunit (Fragment) OS=Peridiscus
lucidus GN=rpoC2 PE=4 SV=1
Length = 828
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/85 (80%), Positives = 71/85 (83%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPS SG IS+N SDRTNINPFY SK RIQQSL QNQGTI
Sbjct: 411 LRIDLVKSPISY-TGKRNDPS-SGLISDNGSDRTNINPFY---SKARIQQSLSQNQGTIR 465
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 466 TLLNRNKECQSLIILSSSNCFRMGP 490
>A9XW56_CAPFL (tr|A9XW56) DNA-directed RNA polymerase (Fragment) OS=Capparis
flexuosa GN=rpoC2 PE=3 SV=1
Length = 1263
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 70/85 (82%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+LAKSHISYI RKRN+PS SG IS+N SD +INPFY IYSK IQQS +QN GTI
Sbjct: 837 IRIDLAKSHISYI-RKRNNPSDSGLISHNGSD--HINPFYFIYSKVSIQQSFRQNYGTIR 893
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LNRNKECQSL+ILSSSNCFRM P
Sbjct: 894 MFLNRNKECQSLLILSSSNCFRMGP 918
>A9XW63_9ROSI (tr|A9XW63) DNA-directed RNA polymerase (Fragment) OS=Connarus
conchocarpus GN=rpoC2 PE=3 SV=1
Length = 1277
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 68/85 (80%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISY SRKR DP GSG IS+N SD TNINPFY SK I SL QNQGTI+
Sbjct: 845 LRIDLVKSHISY-SRKRTDPLGSGLISDNGSDSTNINPFY---SKAEIHPSLSQNQGTIT 900
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLII SSSNCFR+ P
Sbjct: 901 TLLNRNKECQSLIIFSSSNCFRIGP 925
>D2KLS8_OLEEU (tr|D2KLS8) DNA-directed RNA polymerase OS=Olea europaea GN=rpoC2
PE=3 SV=1
Length = 1390
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+I+L KS ISYI KRNDPSGSG +S+N SD TNINPF IYSK RIQQSL QNQGTI
Sbjct: 871 LKIDLVKSPISYIG-KRNDPSGSGLLSDNGSDCTNINPFSSIYSKARIQQSLNQNQGTIH 929
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN QSLIILSSSNCFRM P
Sbjct: 930 TLLNRNTGFQSLIILSSSNCFRMGP 954
>A6YAL6_9MAGN (tr|A6YAL6) RNA polymerase beta' subunit (Fragment) OS=Pterostemon
rotundifolius GN=rpoC2 PE=4 SV=1
Length = 811
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 70/85 (82%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K ISY +RKRNDPSGSG I +N SDRTNINPFY SK RIQQSL QNQGTI
Sbjct: 418 LRIDLVKFPISY-TRKRNDPSGSGLIPDNGSDRTNINPFY---SKARIQQSLSQNQGTIR 473
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC R+ P
Sbjct: 474 TLLNRNKECQSLIILSSSNCSRIGP 498
>D3WAX2_AUCJA (tr|D3WAX2) DNA-directed RNA polymerase OS=Aucuba japonica GN=rpoC2
PE=3 SV=1
Length = 1390
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/87 (77%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYS--KTRIQQSLKQNQGT 58
LRI+L K ISYI KRNDPSGSG IS+N SDRTNI PF IYS K RIQQ L QNQGT
Sbjct: 872 LRIDLVKCPISYIG-KRNDPSGSGLISDNGSDRTNITPFSSIYSYSKARIQQPLNQNQGT 930
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQSLIILSSSNC RM P
Sbjct: 931 IHTLLNRNKECQSLIILSSSNCSRMGP 957
>A6YAK9_9MAGN (tr|A6YAK9) RNA polymerase beta' subunit (Fragment) OS=Itea
virginica GN=rpoC2 PE=4 SV=1
Length = 839
Score = 120 bits (300), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 71/85 (83%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K ISY +RKRNDPSGSG IS+N S+RTNINPFY SK RIQQSL QNQGTI
Sbjct: 416 LRIDLVKFPISY-TRKRNDPSGSGFISDNGSNRTNINPFY---SKARIQQSLSQNQGTIR 471
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC R+ P
Sbjct: 472 TLLNRNKECQSLIILSSSNCSRIGP 496
>A1XK98_HAMMO (tr|A1XK98) RNA polymerase beta chain (Fragment) OS=Hamamelis
mollis GN=rpoC2 PE=4 SV=1
Length = 863
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSGSG IS+N SDRTNINPFY SK RIQQSL QNQG I
Sbjct: 425 LRIDLVKSPISY-TGKRNDPSGSGLISDNGSDRTNINPFY---SKARIQQSLSQNQGIIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKECQSLIILSSSNC RM P
Sbjct: 481 ALLNRNKECQSLIILSSSNCSRMGP 505
>A6YAK7_HAMJA (tr|A6YAK7) RNA polymerase beta' subunit (Fragment) OS=Hamamelis
japonica GN=rpoC2 PE=4 SV=1
Length = 860
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSGSG IS+N SDRTNINPFY SK RIQQSL QNQG I
Sbjct: 422 LRIDLVKSPISY-TGKRNDPSGSGLISDNGSDRTNINPFY---SKARIQQSLSQNQGIIR 477
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKECQSLIILSSSNC RM P
Sbjct: 478 ALLNRNKECQSLIILSSSNCSRMGP 502
>A9XW94_9MYRT (tr|A9XW94) DNA-directed RNA polymerase (Fragment) OS=Lythrum
flagellare GN=rpoC2 PE=3 SV=1
Length = 1283
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LR++L KSHI Y+ RKRNDPSGSG I +N SD T INPFY IYSKT+IQQS QN GTI
Sbjct: 840 LRMDLVKSHILYL-RKRNDPSGSGLIFDNVSDHTRINPFYSIYSKTKIQQSPSQNHGTIR 898
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKE SLIILSSSNCF+M P
Sbjct: 899 TLLNQNKEFPSLIILSSSNCFQMGP 923
>A9XW89_JUGNI (tr|A9XW89) DNA-directed RNA polymerase (Fragment) OS=Juglans nigra
GN=rpoC2 PE=3 SV=1
Length = 1268
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS+ISYI RKR DPSGSG I + SD NINPFY IYSK RIQQSL QNQ TI
Sbjct: 839 LRIDLVKSYISYI-RKRKDPSGSGLIFDERSDPNNINPFYSIYSKARIQQSLSQNQVTIR 897
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNK+ QSLIILS SNCF+M P
Sbjct: 898 TLLNRNKDSQSLIILSLSNCFQMGP 922
>A6YAL4_9MAGN (tr|A6YAL4) RNA polymerase beta' subunit (Fragment) OS=Penthorum
sedoides GN=rpoC2 PE=4 SV=1
Length = 842
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISYI KRNDPSGSG I NN SD TNINPFY SK IQQ L QNQGTI
Sbjct: 422 LRIDLVKSPISYIG-KRNDPSGSGLIYNNGSDNTNINPFY---SKAWIQQPLSQNQGTIR 477
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQSLIILSSSNCFRM
Sbjct: 478 TLLNRNKECQSLIILSSSNCFRM 500
>A9XWC8_9ROSI (tr|A9XWC8) DNA-directed RNA polymerase (Fragment) OS=Viviania
marifolia GN=rpoC2 PE=3 SV=1
Length = 1281
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI L KS ISYI RKRN+PS SG I NN +DRTNINPFY IYS RIQQS+ +NQGTI
Sbjct: 847 LRIELVKSTISYI-RKRNEPSASGLIPNNGADRTNINPFYSIYS--RIQQSISKNQGTIH 903
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
TLL+R KECQSLIILSSSN FRM P
Sbjct: 904 TLLSRKKECQSLIILSSSNYFRMSPL 929
>A1XK06_9ROSI (tr|A1XK06) RNA polymerase beta chain (Fragment) OS=Vitis sp. Qiu
94046 GN=rpoC2 PE=4 SV=1
Length = 844
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 70/89 (78%), Gaps = 5/89 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQ----NQ 56
L INL KS+ISY + KRNDPS SG I++N SD TNINPFY IY K RIQQ L+Q NQ
Sbjct: 399 LTINLVKSYISY-TGKRNDPSSSGLIADNGSDHTNINPFYSIYPKERIQQLLRQRQKKNQ 457
Query: 57 GTISTLLNRNKECQSLIILSSSNCFRMDP 85
GTI TLLNRNKECQSLIILSSSNC RM P
Sbjct: 458 GTIRTLLNRNKECQSLIILSSSNCSRMGP 486
>A9XW60_CEPFO (tr|A9XW60) DNA-directed RNA polymerase (Fragment) OS=Cephalotus
follicularis GN=rpoC2 PE=3 SV=1
Length = 1257
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 71/85 (83%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRN+ GSG IS+N SD TNINPF SKTRIQQSL+QN GTIS
Sbjct: 839 LRIDLVKSHISYI-RKRNNRPGSGFISDNGSDHTNINPFC---SKTRIQQSLRQNHGTIS 894
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN+E QSLIILSSSNCFR+ P
Sbjct: 895 TLLNRNREYQSLIILSSSNCFRIGP 919
>A1XK09_PACPR (tr|A1XK09) RNA polymerase beta chain (Fragment) OS=Pachysandra
procumbens GN=rpoC2 PE=4 SV=1
Length = 866
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/83 (74%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS I Y + KRNDPS SG IS+N SDRTNINPFY IY K RIQQSL Q+QGTI
Sbjct: 423 IRMDLVKSPILY-TGKRNDPSSSGLISDNGSDRTNINPFYSIYCKARIQQSLSQHQGTIR 481
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKEC+SLIILSSSNC RM
Sbjct: 482 TLLNRNKECRSLIILSSSNCSRM 504
>A9XWC5_TROAR (tr|A9XWC5) DNA-directed RNA polymerase OS=Trochodendron aralioides
GN=rpoC2 PE=3 SV=1
Length = 1381
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRND SGSG I +N SDR NINPFY IYSK IQQSL Q+QGTI
Sbjct: 873 IRMDLVKSPISY-TGKRNDLSGSGLIPDNGSDRININPFYSIYSKASIQQSLSQHQGTIR 931
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN ECQSLIILSSSNC RM P
Sbjct: 932 TLLNRNNECQSLIILSSSNCSRMGP 956
>A1XK08_9MAGN (tr|A1XK08) RNA polymerase beta chain (Fragment) OS=Gunnera monoica
GN=rpoC2 PE=4 SV=1
Length = 866
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 70/87 (80%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQ--NQGT 58
LRI+L KS ISY + KRNDP+GSG IS+N SDRTNINPFY IYSK RIQQSL Q NQGT
Sbjct: 423 LRIDLVKSSISY-TGKRNDPAGSGLISDNGSDRTNINPFYSIYSKGRIQQSLSQNKNQGT 481
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QS +ILSSSNC R+ P
Sbjct: 482 SRTLLNRNKESQSFLILSSSNCSRVGP 508
>A1XK48_9ERIC (tr|A1XK48) RNA polymerase beta chain (Fragment) OS=Camellia
japonica GN=rpoC2 PE=4 SV=1
Length = 863
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYP--IYSKTRIQQSLKQNQGT 58
LRI+L KS ISY + KR DPS SG IS+N SDRTNINPF YSK +IQQSL QNQGT
Sbjct: 420 LRIDLVKSSISY-TGKRKDPSSSGLISDNGSDRTNINPFSSTFFYSKAKIQQSLNQNQGT 478
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQSLIILSSSNC RM P
Sbjct: 479 IHTLLNRNKECQSLIILSSSNCSRMGP 505
>A1XK11_TROAR (tr|A1XK11) RNA polymerase beta chain (Fragment) OS=Trochodendron
aralioides GN=rpoC2 PE=4 SV=1
Length = 865
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRND SGSG I +N SDR NINPFY IYSK IQQSL Q+QGTI
Sbjct: 424 IRMDLVKSPISY-TGKRNDLSGSGLIPDNGSDRININPFYSIYSKASIQQSLSQHQGTIR 482
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN ECQSLIILSSSNC RM P
Sbjct: 483 TLLNRNNECQSLIILSSSNCSRMGP 507
>D3WBD0_9BORA (tr|D3WBD0) DNA-directed RNA polymerase OS=Ehretia acuminata
GN=rpoC2 PE=3 SV=1
Length = 1381
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYS--KTRIQQSLKQNQGT 58
LRI+L KS ISYI KRNDP S +S+N SD TNINPF IYS K RIQQSL QNQGT
Sbjct: 872 LRIDLVKSPISYIG-KRNDPLDSRLLSDNGSDCTNINPFSSIYSYSKGRIQQSLNQNQGT 930
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQSLIILSSSNCFRM P
Sbjct: 931 IHTLLNRNKECQSLIILSSSNCFRMGP 957
>D3WC95_NELNU (tr|D3WC95) DNA-directed RNA polymerase OS=Nelumbo nucifera
GN=rpoC2 PE=3 SV=1
Length = 1390
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 70/83 (84%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++LAKS ISYI KRNDP+GSG IS+N SDRTN NPFY SK RIQQSL Q+QGTI
Sbjct: 874 IRMDLAKSPISYIG-KRNDPAGSGLISDNRSDRTNRNPFY---SKARIQQSLSQHQGTIR 929
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQSLIILSSSNC R+
Sbjct: 930 TLLNRNKECQSLIILSSSNCSRI 952
>D3WC16_9MAGN (tr|D3WC16) DNA-directed RNA polymerase OS=Meliosma aff. cuneifolia
Moore 333 GN=rpoC2 PE=3 SV=1
Length = 1377
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 68/83 (81%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L K ISY + KRNDP+GSG I +N SDRTNINPFY SK RIQQSL Q+QGTI
Sbjct: 872 IRMDLVKPPISY-TVKRNDPAGSGLIPDNGSDRTNINPFY---SKARIQQSLSQHQGTIR 927
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKEC SLIILSSSNCFRM
Sbjct: 928 TLLNRNKECHSLIILSSSNCFRM 950
>A1XK17_NELNU (tr|A1XK17) RNA polymerase beta chain (Fragment) OS=Nelumbo
nucifera GN=rpoC2 PE=4 SV=1
Length = 866
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/83 (75%), Positives = 70/83 (84%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++LAKS ISYI KRNDP+GSG IS+N SDRTN NPFY SK RIQQSL Q+QGTI
Sbjct: 425 IRMDLAKSPISYIG-KRNDPAGSGLISDNRSDRTNRNPFY---SKARIQQSLSQHQGTIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQSLIILSSSNC R+
Sbjct: 481 TLLNRNKECQSLIILSSSNCSRI 503
>A1XK97_SIMCH (tr|A1XK97) RNA polymerase beta chain (Fragment) OS=Simmondsia
chinensis GN=rpoC2 PE=4 SV=1
Length = 800
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 67/85 (78%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPI--YSKTRIQQSLKQNQGT 58
LRI+L KS I Y + KRNDP GSG +N SDRTN+NPFY I YSK R+QQS +QNQGT
Sbjct: 360 LRIDLVKSAILY-TGKRNDPLGSGFFYDNGSDRTNMNPFYSISIYSKARLQQSFRQNQGT 418
Query: 59 ISTLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQS +ILSSSNCFRM
Sbjct: 419 ARTLLNRNKECQSFLILSSSNCFRM 443
>A9XW57_CARPA (tr|A9XW57) DNA-directed RNA polymerase (Fragment) OS=Carica papaya
GN=rpoC2 PE=3 SV=1
Length = 1163
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/87 (75%), Positives = 70/87 (80%), Gaps = 8/87 (9%)
Query: 1 LRINLAKS--HISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGT 58
LRI+L KS HISYI RKRNDPSGSG IS+N SDR INPFY K RIQQSL +N GT
Sbjct: 842 LRIDLVKSQSHISYI-RKRNDPSGSGLISDNGSDR--INPFY---YKERIQQSLSKNHGT 895
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQSLIILSSSNCF+M P
Sbjct: 896 IRTLLNRNKECQSLIILSSSNCFQMGP 922
>B8R492_TRISU (tr|B8R492) DNA-directed RNA polymerase OS=Trifolium subterraneum
GN=rpoC2 PE=3 SV=1
Length = 1349
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS+ SYI RKRNDPSG G I++NE DR NINPF+ I+SK +IQQS+ QN GTI
Sbjct: 852 LRIDLVKSNTSYI-RKRNDPSGLGLIADNELDRININPFFSIHSKAKIQQSISQNHGTIR 910
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
LLNRNKE +S IILSSSNCF+M
Sbjct: 911 MLLNRNKESRSWIILSSSNCFQM 933
>A1XK13_9MAGN (tr|A1XK13) RNA polymerase beta chain (Fragment) OS=Meliosma
squamulata GN=rpoC2 PE=4 SV=1
Length = 861
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 68/83 (81%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L K ISY + KRNDP+GSG I +N SDRTNINPFY SK RIQQSL Q+QGTI
Sbjct: 423 IRMDLVKPPISY-TVKRNDPAGSGLIPDNGSDRTNINPFY---SKGRIQQSLSQHQGTIR 478
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKEC SLIILSSSNCFRM
Sbjct: 479 TLLNRNKECHSLIILSSSNCFRM 501
>A9XW90_9ROSI (tr|A9XW90) DNA-directed RNA polymerase (Fragment) OS=Krameria
lanceolata GN=rpoC2 PE=3 SV=1
Length = 1027
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+I+L KS ISYI RKR DPSGSG ISNN SDRTN+NPF I SK +IQQSL QN+G +
Sbjct: 842 LKIDLVKSSISYI-RKRKDPSGSGLISNNGSDRTNMNPFSLISSKAKIQQSLSQNKGILR 900
Query: 61 TLLNR--NKECQSLIILSSSNCFRMDP 85
LNR NKEC+SLIILSSSNCFRM P
Sbjct: 901 AFLNRNKNKECRSLIILSSSNCFRMGP 927
>A9XWC6_TROMA (tr|A9XWC6) DNA-directed RNA polymerase (Fragment) OS=Tropaeolum
majus GN=rpoC2 PE=3 SV=1
Length = 1274
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 70/85 (82%), Gaps = 6/85 (7%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISYI RKRNDPSGSG +S+N SDR INPFY SK+R+QQSL QN GTI
Sbjct: 837 LRIHLVKSPISYI-RKRNDPSGSGFVSDNGSDR--INPFY---SKSRVQQSLSQNHGTIR 890
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN+ECQSL ILSSSNCFR+ P
Sbjct: 891 TLLNRNQECQSLRILSSSNCFRIGP 915
>D5MAS6_LATSA (tr|D5MAS6) DNA-directed RNA polymerase OS=Lathyrus sativus
GN=rpoC2 PE=3 SV=1
Length = 1382
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 69/85 (81%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS+ SYI RKRNDPSG G I +N+SDR INPF+ I+SK +IQQSL QN GTI
Sbjct: 882 LRIDLVKSNTSYI-RKRNDPSGLGLIGDNKSDR--INPFFSIHSKGKIQQSLSQNHGTIR 938
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKEC+S IILSSSNCF+M P
Sbjct: 939 MLLNRNKECRSWIILSSSNCFQMRP 963
>B7T486_9ROSI (tr|B7T486) DNA-directed RNA polymerase OS=Pelargonium cotyledonis
GN=rpoC2 PE=3 SV=1
Length = 1363
Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI L K I+YI RKRNDPSGSG S+NE D T NPFY Y K RI+QSL QN+GTI
Sbjct: 850 LRIRLGKPQIAYI-RKRNDPSGSGFTSDNELDHTKRNPFYSSYPKARIRQSLSQNRGTIR 908
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN+ CQS +ILSSSNCFR+ P
Sbjct: 909 TLLNRNQACQSFLILSSSNCFRLGP 933
>A9XW50_BIXOR (tr|A9XW50) DNA-directed RNA polymerase (Fragment) OS=Bixa orellana
GN=rpoC2 PE=3 SV=1
Length = 1266
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS I YI RKRNDPSGSG IS+ SDRTN NPFY S TRIQQ QN GTI
Sbjct: 841 LRIDLVKSRILYI-RKRNDPSGSGLISDIGSDRTNQNPFY---STTRIQQFFSQNHGTIR 896
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE Q LIILSSSNCFRM P
Sbjct: 897 TLLNRNKESQFLIILSSSNCFRMGP 921
>A9XWA2_9ROSI (tr|A9XWA2) DNA-directed RNA polymerase OS=Oxalis latifolia
GN=rpoC2 PE=3 SV=1
Length = 1370
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 71/85 (83%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KSHISYI +KR+DP+GSG +++N D +INPFY SK IQ SL+QN+GTI+
Sbjct: 866 IRIDLVKSHISYI-KKRDDPTGSGLLADNGPDSPDINPFY---SKAEIQPSLRQNKGTIN 921
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKECQSLIILSSS+CFRM P
Sbjct: 922 TLLNQNKECQSLIILSSSHCFRMGP 946
>D3WCW5_RHOSS (tr|D3WCW5) DNA-directed RNA polymerase OS=Rhododendron simsii
GN=rpoC2 PE=3 SV=1
Length = 1374
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 5/89 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIY----SKTRIQQSLKQNQ 56
+RI+L KS ISY + KRNDPSGS IS+N SDRTNINPF+ + K +IQQSL QN+
Sbjct: 876 IRIDLVKSSISY-TEKRNDPSGSEWISDNGSDRTNINPFFSTFFYSKEKIQIQQSLNQNE 934
Query: 57 GTISTLLNRNKECQSLIILSSSNCFRMDP 85
GT+ TLLNRNKECQS IILSSSNC RM P
Sbjct: 935 GTLHTLLNRNKECQSFIILSSSNCSRMGP 963
>B5AGZ9_9ROSI (tr|B5AGZ9) DNA-directed RNA polymerase OS=Gonystylus bancanus
GN=rpoC2 PE=3 SV=1
Length = 1370
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/83 (73%), Positives = 63/83 (75%), Gaps = 1/83 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHI YI RKRNDPSGSG IS+N SDR N NPFY YSK RIQQS QN GTI
Sbjct: 872 LRIDLVKSHILYI-RKRNDPSGSGLISDNGSDRINKNPFYSTYSKARIQQSFSQNHGTIR 930
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
LLNRNKE QS ILSSSN F M
Sbjct: 931 MLLNRNKESQSFRILSSSNYFCM 953
>A9XWB9_9FABA (tr|A9XWB9) DNA-directed RNA polymerase (Fragment) OS=Stylobasium
spathulatum GN=rpoC2 PE=3 SV=1
Length = 1266
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 72/83 (86%), Gaps = 1/83 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKRND SGSG IS+NESDRTNINPF+ IY KT+IQQSL QN GTI
Sbjct: 841 LRIDLVKSHISYI-RKRNDASGSGFISDNESDRTNINPFFSIYCKTKIQQSLSQNHGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
LLNRNKE +SLIILSSSNCF+M
Sbjct: 900 MLLNRNKESRSLIILSSSNCFQM 922
>A1XKD0_9ROSI (tr|A1XKD0) RNA polymerase beta chain (Fragment) OS=Oxalis sp. Qiu
94028 GN=rpoC2 PE=4 SV=1
Length = 827
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 71/85 (83%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KSHISYI +KR+DP+GSG +++N D +INPFY SK IQ SL+QN+GTI+
Sbjct: 423 IRIDLVKSHISYI-KKRDDPTGSGLLADNGPDSPDINPFY---SKAEIQPSLRQNKGTIN 478
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKECQSLIILSSS+CFRM P
Sbjct: 479 TLLNQNKECQSLIILSSSHCFRMGP 503
>A9XW83_9ROSI (tr|A9XW83) DNA-directed RNA polymerase (Fragment) OS=Hymenanthera
alpina GN=rpoC2 PE=3 SV=1
Length = 1313
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 64/84 (76%), Gaps = 9/84 (10%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+INL KSH YISRKRN PS G ISN PF +YSKTRIQQSLK+NQGT S
Sbjct: 881 LKINLVKSHFFYISRKRNGPSSLGSISN---------PFSFLYSKTRIQQSLKKNQGTFS 931
Query: 61 TLLNRNKECQSLIILSSSNCFRMD 84
TLLNRNKEC+SL ILSSSNCFRMD
Sbjct: 932 TLLNRNKECKSLGILSSSNCFRMD 955
>A9XW98_9MYRT (tr|A9XW98) DNA-directed RNA polymerase (Fragment) OS=Myrtus
communis GN=rpoC2 PE=3 SV=1
Length = 1284
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 6/87 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISN--NESDRTNINPFYPIYSKTRIQQSLKQNQGT 58
LRI+L K ISY+ RKRNDPSGSG IS+ N SD TN NPFY SKT++QQS QNQGT
Sbjct: 848 LRIDLVKFPISYL-RKRNDPSGSGLISDSDNVSDHTNSNPFY---SKTKMQQSFSQNQGT 903
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLN+NKEC SLIILSSSNCFRM P
Sbjct: 904 IRTLLNKNKECPSLIILSSSNCFRMGP 930
>D5MAK5_PEA (tr|D5MAK5) DNA-directed RNA polymerase OS=Pisum sativum GN=rpoC2
PE=3 SV=1
Length = 1367
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 69/85 (81%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS+ SYI RKRN+PSG G I +N+SDR INPF+ I+SK +IQQSL QN GTI
Sbjct: 868 LRIDLVKSNTSYI-RKRNEPSGFGLIGDNKSDR--INPFFSIHSKGKIQQSLSQNHGTIR 924
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKEC+S IILSSSNCF+M P
Sbjct: 925 MLLNRNKECRSWIILSSSNCFQMRP 949
>B7T3U5_9ROSI (tr|B7T3U5) DNA-directed RNA polymerase OS=Monsonia speciosa
GN=rpoC2 PE=3 SV=1
Length = 1398
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS IS I RKRNDPSGSG S N D TN NPFY YSK R++Q L+QNQGTI
Sbjct: 883 LRIHLGKSQISDI-RKRNDPSGSGLPSENGPDHTNTNPFYSSYSKARVRQPLRQNQGTIR 941
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T +NRNKECQS +ILSSSNCF++ P
Sbjct: 942 TPVNRNKECQSFLILSSSNCFQLGP 966
>A9QAX6_9APIA (tr|A9QAX6) DNA-directed RNA polymerase (Fragment) OS=Anethum
graveolens GN=rpoC2 PE=3 SV=1
Length = 1386
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPF---YPIYSKTRIQQSLKQNQG 57
++I+L KS ISY + KRNDPSGSG IS N SD TNINPF + YS RI++SL QNQG
Sbjct: 869 IKIDLVKSPISYTA-KRNDPSGSGFISENGSDCTNINPFSSSFFYYSNARIKESLNQNQG 927
Query: 58 TISTLLNRNKECQSLIILSSSNCFRMDP 85
TI TLLNRNKE QSLIILSSSNCFRM P
Sbjct: 928 TIHTLLNRNKEYQSLIILSSSNCFRMGP 955
>A1XK22_AKEQU (tr|A1XK22) RNA polymerase beta chain (Fragment) OS=Akebia quinata
GN=rpoC2 PE=4 SV=1
Length = 861
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRND +GSG I N SDRTN+NPFY SKTRIQQSL Q++GTI
Sbjct: 423 IRMDLVKSLISY-TGKRNDSAGSGLIPANGSDRTNLNPFY---SKTRIQQSLTQHKGTIR 478
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 479 TLLNRNKECQSLIILSSSNCSRMGP 503
>A1XK51_TOBAC (tr|A1XK51) RNA polymerase beta chain (Fragment) OS=Nicotiana
tabacum GN=rpoC2 PE=4 SV=1
Length = 802
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYS--KTRIQQSLKQNQGT 58
LRINL KS ISYI KRNDPSGSG +S+N SD TNINPF +YS K +IQQS+ Q QGT
Sbjct: 357 LRINLVKSPISYIG-KRNDPSGSGLLSDNGSDCTNINPFSSMYSYSKAKIQQSINQPQGT 415
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKECQSLIILS++ C RM P
Sbjct: 416 IHTLLNRNKECQSLIILSAAXCSRMGP 442
>A9XWC4_9ROSI (tr|A9XWC4) DNA-directed RNA polymerase (Fragment) OS=Thymelaea
sanamunda GN=rpoC2 PE=3 SV=1
Length = 1285
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHI YI RKRNDPSGSG I +N SDR N NPFY YSK RIQQ QN GTI
Sbjct: 840 LRIDLVKSHILYI-RKRNDPSGSGLIYDNGSDRINKNPFYSTYSKARIQQFFIQNHGTIR 898
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
LLNRNKE QS IILSSSN F M
Sbjct: 899 MLLNRNKESQSFIILSSSNYFCM 921
>D3WBT7_LONJA (tr|D3WBT7) DNA-directed RNA polymerase OS=Lonicera japonica
GN=rpoC2 PE=3 SV=1
Length = 1390
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 68/88 (77%), Gaps = 3/88 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPI--YSKTRIQQSLKQNQGT 58
LRI+LAKS I Y + KRND SGSG IS N SDRTNINPF I YS +IQ+S+ QNQGT
Sbjct: 870 LRIDLAKSPILY-TGKRNDTSGSGLISENGSDRTNINPFSSIFSYSGAKIQESVNQNQGT 928
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDPC 86
I TLLNRNKECQSLII SSSNC R+ C
Sbjct: 929 IHTLLNRNKECQSLIIFSSSNCSRIGSC 956
>A9XW74_9ROSI (tr|A9XW74) DNA-directed RNA polymerase OS=Euonymus americanus
GN=rpoC2 PE=3 SV=1
Length = 1395
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSH Y SRKR D S SG + +N S+R NINPFY K RIQQSL+QNQGTIS
Sbjct: 872 LRIDLVKSHSLY-SRKRKDFSSSGFLYDNASERANINPFYL---KARIQQSLRQNQGTIS 927
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILSS NCFRM P
Sbjct: 928 TLLNRNKEYQSLIILSSPNCFRMGP 952
>A9XW51_BREMA (tr|A9XW51) DNA-directed RNA polymerase (Fragment) OS=Brexia
madagascariensis GN=rpoC2 PE=3 SV=1
Length = 1268
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI L KSH Y SRKR D S SG + +N S+R NINPFY K RIQQSL+QNQGTIS
Sbjct: 837 LRIYLVKSHSLY-SRKRKDFSSSGFLYDNASERGNINPFY---LKARIQQSLRQNQGTIS 892
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKECQSLIILSS NCFRM P
Sbjct: 893 KLLNRNKECQSLIILSSPNCFRMGP 917
>A1XK61_MAHBE (tr|A1XK61) RNA polymerase beta chain (Fragment) OS=Mahonia bealei
GN=rpoC2 PE=4 SV=1
Length = 833
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 68/85 (80%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY +RKRN P+GS I N SD TN+NPF+ YSK RIQQSL Q+QGTI
Sbjct: 392 IRMDLVKSPISY-TRKRNSPAGSELILANGSDGTNLNPFF--YSKARIQQSLIQHQGTIR 448
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS IILSSSNCFR+ P
Sbjct: 449 TLLNRNKECQSFIILSSSNCFRIGP 473
>B7T416_9ROSI (tr|B7T416) DNA-directed RNA polymerase OS=Monsonia vanderietiae
GN=rpoC2 PE=3 SV=1
Length = 1392
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K ISYI RKRNDPSGSG S+N D TN NPFY YSK R++Q L+QNQGTI
Sbjct: 883 LRIHLGK--ISYI-RKRNDPSGSGLPSDNGPDHTNTNPFYSSYSKARVRQPLRQNQGTIR 939
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T +NRNKECQS +ILSSSNCF++ P
Sbjct: 940 TPVNRNKECQSFLILSSSNCFQLGP 964
>A6YAL8_RIBAM (tr|A6YAL8) RNA polymerase beta' subunit (Fragment) OS=Ribes
americanum GN=rpoC2 PE=4 SV=1
Length = 808
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPS SG IS+N DRTNINPFY SK R+QQSL +NQGTI
Sbjct: 419 LRIDLVKSPISY-TGKRNDPSSSGLISDNGPDRTNINPFY---SKARLQQSLSKNQGTIR 474
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
TLLNRNKE +SLIILSSSNC RM P
Sbjct: 475 TLLNRNKEFKSLIILSSSNCSRMGPL 500
>D7P2Y0_SYZCU (tr|D7P2Y0) RNA polymerase beta' subunit OS=Syzygium cumini
GN=rpoC2 PE=4 SV=1
Length = 1392
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 69/87 (79%), Gaps = 6/87 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISN--NESDRTNINPFYPIYSKTRIQQSLKQNQGT 58
LRI+L K ISY+ RKRNDPSGSG IS+ N SD TN NPFY SKT+IQQ L QNQGT
Sbjct: 873 LRIDLVKFPISYL-RKRNDPSGSGLISDSDNVSDYTNSNPFY---SKTKIQQLLSQNQGT 928
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLN+NKEC SLIILSSSNCF+M P
Sbjct: 929 IRTLLNKNKECPSLIILSSSNCFQMGP 955
>A9XW84_9ROSI (tr|A9XW84) DNA-directed RNA polymerase (Fragment) OS=Hypericum
kalmianum GN=rpoC2 PE=3 SV=1
Length = 1289
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSL--KQNQGT 58
LRINL KS ISY+S+KRND SGS IS S RT NPF+ IYSK +IQQSL KQNQ +
Sbjct: 840 LRINLVKSDISYMSKKRNDSSGSEWISARGSARTISNPFFSIYSKAKIQQSLKPKQNQES 899
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL ILSS NCFR+DP
Sbjct: 900 SITLLNRNKECQSLRILSSVNCFRIDP 926
>D3WCH4_NEROL (tr|D3WCH4) DNA-directed RNA polymerase OS=Nerium oleander GN=rpoC2
PE=3 SV=1
Length = 1385
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYS--KTRIQQSLKQNQGT 58
LRI LAKS ISYI KRNDPSGSG +S+N SD TNINPF IYS K RIQQ L NQGT
Sbjct: 866 LRIYLAKSPISYIG-KRNDPSGSGLLSDNGSDYTNINPFSSIYSYSKARIQQFLNPNQGT 924
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKE Q LIIL SSNC RM P
Sbjct: 925 IHTLLNRNKEFQPLIILLSSNCSRMGP 951
>D3WD31_XIMAM (tr|D3WD31) DNA-directed RNA polymerase OS=Ximenia americana
GN=rpoC2 PE=3 SV=1
Length = 1391
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSK-TRIQQSLKQNQGTI 59
LRI+L KS ISY + KRN+P GS IS+N SDR NINPFY IYSK T IQ+SL QNQGTI
Sbjct: 884 LRIDLVKSPISY-TGKRNNPIGSELISDNGSDRNNINPFYSIYSKATSIQESLSQNQGTI 942
Query: 60 STLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL ILSS +C RM P
Sbjct: 943 RTLLNRNKECQSLRILSSFDCSRMGP 968
>A1XK16_PLAOC (tr|A1XK16) RNA polymerase beta chain (Fragment) OS=Platanus
occidentalis GN=rpoC2 PE=4 SV=1
Length = 863
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 70/86 (81%), Gaps = 4/86 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS IS+ + KRNDP+GSG I +N SDRTNINPFY SK RIQQSL ++QGT+
Sbjct: 424 IRMDLVKSTISH-TGKRNDPAGSGLIPDNGSDRTNINPFY---SKARIQQSLSRHQGTLR 479
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
+LLNRNKECQSLIILSSSNC +M P
Sbjct: 480 SLLNRNKECQSLIILSSSNCSQMGPL 505
>A1XK19_XANSI (tr|A1XK19) RNA polymerase beta chain (Fragment) OS=Xanthorhiza
simplicissima GN=rpoC2 PE=4 SV=1
Length = 861
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L K I Y +RKRNDP+GSG I N SDRTN+NPFY SK RI+QSL + QGTI
Sbjct: 423 IRMDLVKPPILY-TRKRNDPAGSGLIPANGSDRTNLNPFY---SKARIKQSLTRYQGTIR 478
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLI LSSSNCFR+ P
Sbjct: 479 TLLNRNKECQSLITLSSSNCFRIGP 503
>A9XWA8_9MYRT (tr|A9XWA8) DNA-directed RNA polymerase (Fragment) OS=Qualea
parviflora GN=rpoC2 PE=3 SV=1
Length = 1272
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 65/83 (78%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LR++L K ISY+ RKRN P G IS+N SD TNINPFY YSK +IQQSL QNQGTI
Sbjct: 840 LRVDLVKFPISYL-RKRNAP---GLISDNVSDHTNINPFYSTYSKKKIQQSLIQNQGTIR 895
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLN+ KEC SLIILSSSNCFRM
Sbjct: 896 TLLNKKKECPSLIILSSSNCFRM 918
>A9XW80_HEUSA (tr|A9XW80) DNA-directed RNA polymerase OS=Heuchera sanguinea
GN=rpoC2 PE=3 SV=1
Length = 1376
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI++ KS ISY + KRN PS SG + +N SDRTNINPFY SK +IQQSL QNQGTI
Sbjct: 871 LRIDVVKSPISY-TGKRNSPSSSGLVYDNGSDRTNINPFY---SKAKIQQSLSQNQGTIR 926
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TL NRNKE QSLIILSSSNC RM P
Sbjct: 927 TLFNRNKEFQSLIILSSSNCSRMGP 951
>A9XWB2_9ROSI (tr|A9XWB2) DNA-directed RNA polymerase (Fragment)
OS=Ruptiliocarpon caracolito GN=rpoC2 PE=3 SV=1
Length = 988
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L K HISYI +KRN SG I +N SDRTNINPFY KTRIQQS +QN GTIS
Sbjct: 824 LRIDLVKFHISYI-KKRNGSLSSGFIYDNASDRTNINPFY---FKTRIQQSFRQNHGTIS 879
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE +SL+ILSS NCFR+ P
Sbjct: 880 TLLNRNKEYRSLMILSSLNCFRIGP 904
>A1XK45_9MAGN (tr|A1XK45) RNA polymerase beta chain (Fragment) OS=Heuchera sp.
Qiu 95076 GN=rpoC2 PE=4 SV=1
Length = 857
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI++ KS ISY + KRN PS SG + +N SDRTNINPFY SK +IQQSL QNQGTI
Sbjct: 422 LRIDVVKSPISY-TGKRNSPSSSGLVYDNGSDRTNINPFY---SKAKIQQSLSQNQGTIR 477
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TL NRNKE QSLIILSSSNC RM P
Sbjct: 478 TLFNRNKEFQSLIILSSSNCSRMGP 502
>A6YAK8_HEUMI (tr|A6YAK8) RNA polymerase beta' subunit (Fragment) OS=Heuchera
micrantha GN=rpoC2 PE=4 SV=1
Length = 802
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI++ KS ISY + KRN PS SG + +N SDRTNINPFY SK +IQQSL QNQGTI
Sbjct: 382 LRIDVVKSPISY-TGKRNSPSSSGLVYDNGSDRTNINPFY---SKAKIQQSLSQNQGTIR 437
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TL NRNKE QSLIILSSSNC RM P
Sbjct: 438 TLFNRNKEFQSLIILSSSNCSRMGP 462
>A9XW76_FLOPR (tr|A9XW76) DNA-directed RNA polymerase (Fragment) OS=Floerkea
proserpinacoides GN=rpoC2 PE=3 SV=1
Length = 1257
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+I+LAK+ ISYI RKRNDPSGSG I +N S +INPFY YSK RIQQSL +N+GTI
Sbjct: 835 LKIDLAKAPISYI-RKRNDPSGSGLIFDNGS--YHINPFYSFYSKARIQQSLSKNRGTIR 891
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T+LN NKE QSL+ILSSSNCF++ P
Sbjct: 892 TVLNINKEWQSLMILSSSNCFQIGP 916
>A9XW70_9ROSA (tr|A9XW70) DNA-directed RNA polymerase (Fragment) OS=Elaeagnus sp.
Nickrent 2898 GN=rpoC2 PE=3 SV=1
Length = 1260
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KSHI YI +KR D GSG IS+N +DRTN PF+ IY K RIQQ L QNQGTI
Sbjct: 844 LRINLGKSHILYI-KKRKDLLGSGWISDNRADRTN--PFFSIYPKERIQQPLSQNQGTIR 900
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNR+KE QS +ILS+SNCF++ P
Sbjct: 901 TFLNRSKESQSFLILSASNCFQIGP 925
>A9XW99_9ROSI (tr|A9XW99) DNA-directed RNA polymerase (Fragment) OS=Neurada
procumbens GN=rpoC2 PE=3 SV=1
Length = 1265
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSH YI RKRNDPSGSG IS+N + RTN NPFY IYSK RI +SL QN GTI
Sbjct: 841 LRIDLVKSHYIYI-RKRNDPSGSGLISHNGAGRTNKNPFYSIYSKARILKSLSQNHGTIR 899
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILSSSNCFRM P
Sbjct: 900 TLLNRNKESQSLIILSSSNCFRMGP 924
>D3WAP3_ANTMA (tr|D3WAP3) DNA-directed RNA polymerase OS=Antirrhinum majus
GN=rpoC2 PE=3 SV=1
Length = 1361
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+LAKS ISYI KRNDPS S +S+N D TNINPF IYSK RI+QSL QNQ TI
Sbjct: 859 LRIDLAKSPISYIG-KRNDPSVSALLSDNGWDYTNINPFSSIYSKARIEQSLDQNQRTIH 917
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLN+N QS+IILSSSNCFRM P
Sbjct: 918 MLLNQNTGFQSVIILSSSNCFRMGP 942
>A1XK65_9MAGN (tr|A1XK65) RNA polymerase beta chain (Fragment) OS=Lardizabala
biternata GN=rpoC2 PE=4 SV=1
Length = 861
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRND + SG I N SDRTN+NPFY SK RIQQSL Q++GTI
Sbjct: 423 IRMDLVKSLISY-TGKRNDSAWSGLIPANGSDRTNLNPFY---SKARIQQSLTQHKGTIR 478
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC RM P
Sbjct: 479 TLLNRNKECQSLIILSSSNCSRMGP 503
>A1XK43_9CARY (tr|A1XK43) RNA polymerase beta chain (Fragment) OS=Polygonum sp.
Qiu 94110 GN=rpoC2 PE=4 SV=1
Length = 821
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRNDPSGSG +S+N DR +NPF+ YSK R+QQS QN T+
Sbjct: 395 LRIDLVKSTISY-AGKRNDPSGSGLLSDNGLDR--MNPFFSSYSKARLQQSFSQNHETVR 451
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR KECQS +ILSS+NCFRM P
Sbjct: 452 TLLNRTKECQSFLILSSANCFRMGP 476
>B7T312_EROTE (tr|B7T312) DNA-directed RNA polymerase OS=Erodium texanum GN=rpoC2
PE=3 SV=1
Length = 1395
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPF---YPIYSKTRIQQSLKQNQG 57
L+++L K ISYI RKR DPSGSG S N DRTNINPF Y IYSK R++Q L QNQG
Sbjct: 888 LKMHLGKFQISYI-RKREDPSGSGLPSENGPDRTNINPFSSSYSIYSKARVRQPLSQNQG 946
Query: 58 TISTLLNRNKECQSLIILSSSNCFRMDPC 86
T LLNR+KE QS IILSSSNCF++ P
Sbjct: 947 TARILLNRSKESQSFIILSSSNCFQLGPV 975
>C3UNW2_9MAGN (tr|C3UNW2) DNA-directed RNA polymerase OS=Megaleranthis
saniculifolia GN=rpoC2 PE=3 SV=1
Length = 1383
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L K ISY +RKRND +GSG IS N SDRTN+NPFY SK RI+Q L ++QGTI
Sbjct: 866 IRIDLVKLPISY-TRKRNDLAGSGLISANGSDRTNLNPFY---SKARIKQLLIRHQGTIR 921
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQSLI LSSSNCFR+
Sbjct: 922 TLLNRNKECQSLITLSSSNCFRI 944
>A1XKA7_COFAR (tr|A1XKA7) RNA polymerase beta chain (Fragment) OS=Coffea arabica
GN=rpoC2 PE=4 SV=1
Length = 850
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYS--KTRIQQSLKQNQGT 58
LRI+L KS ISYI KRNDPSGSG +S+N SD TNINPF IYS K RIQQ L NQGT
Sbjct: 405 LRIDLVKSPISYIV-KRNDPSGSGLLSDNGSDCTNINPFSSIYSYSKARIQQFLNPNQGT 463
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLN+N+E QSLIIL SSNC RM P
Sbjct: 464 IHTLLNKNREFQSLIILLSSNCSRMGP 490
>A1XKD7_9MAGN (tr|A1XKD7) RNA polymerase beta chain (Fragment) OS=Persoonia
katerae GN=rpoC2 PE=4 SV=1
Length = 827
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 71/90 (78%), Gaps = 7/90 (7%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRNDP+GSG IS+N SDRTN NPFY YSK RIQ+SL+Q+QGT+
Sbjct: 384 IRMDLVKSPISY-TGKRNDPAGSGLISDNGSDRTNRNPFY-FYSKARIQESLRQHQGTVR 441
Query: 61 TLL-----NRNKECQSLIILSSSNCFRMDP 85
TLL N+NKECQS IILSSSNC ++ P
Sbjct: 442 TLLHRNKKNKNKECQSFIILSSSNCSQIGP 471
>A6YAL9_SAXIN (tr|A6YAL9) RNA polymerase beta' subunit (Fragment) OS=Saxifraga
integrifolia GN=rpoC2 PE=4 SV=1
Length = 812
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI++ KS ISYI KRN PS SG IS+N SDRTNINPFY SK RIQQSL QNQGTI
Sbjct: 399 LRIDVVKSPISYIG-KRNSPSSSGLISDNGSDRTNINPFY---SKARIQQSLSQNQGTIR 454
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN N E SLIILSSSNC RM P
Sbjct: 455 TLLNINTEFPSLIILSSSNCSRMGP 479
>A1XKE0_9MAGN (tr|A1XKE0) RNA polymerase beta chain (Fragment) OS=Petrophile
canescens GN=rpoC2 PE=4 SV=1
Length = 789
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 70/90 (77%), Gaps = 9/90 (10%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LR++L KS ISY + KRND +GSG I +N SDRTNINPFY SKTRIQ+S +QNQGT+
Sbjct: 383 LRMDLVKSPISY-TGKRNDLAGSGLIPDNGSDRTNINPFY---SKTRIQESFRQNQGTVR 438
Query: 61 TLLNRNK-----ECQSLIILSSSNCFRMDP 85
TLL+RNK ECQSLIILSSSNC +M P
Sbjct: 439 TLLHRNKNKRNRECQSLIILSSSNCSQMGP 468
>A1XK99_9ROSI (tr|A1XK99) RNA polymerase beta chain (Fragment) OS=Sterculia
balanghas GN=rpoC2 PE=4 SV=1
Length = 869
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHI YI RKRND SGSG IS+N SDR N NPFY IYS RIQQS QN GTI
Sbjct: 423 LRIDLVKSHIFYI-RKRNDLSGSGLISDNRSDRPNKNPFYSIYSNARIQQSFSQNHGTIH 481
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR KE QSLIILSSSNCFRM P
Sbjct: 482 TLLNRTKESQSLIILSSSNCFRMGP 506
>A9XW97_MYRCE (tr|A9XW97) DNA-directed RNA polymerase (Fragment) OS=Myrica
cerifera GN=rpoC2 PE=3 SV=1
Length = 1274
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKR DPSGSG I SD NINPFY IYSK RIQQS QNQ TI
Sbjct: 840 LRIDLVKSHISYI-RKRKDPSGSGLIFGERSDPKNINPFYSIYSKARIQQSFSQNQVTIR 898
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILSSSNCF+M P
Sbjct: 899 TLLNRNKESQSLIILSSSNCFQMGP 923
>A9XW91_LEEGU (tr|A9XW91) DNA-directed RNA polymerase (Fragment) OS=Leea
guineensis GN=rpoC2 PE=3 SV=1
Length = 1260
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESD--RTNINPFYPIYSKTRIQQSLKQ--NQ 56
L I L KS+ISY + KRNDP SG I++N SD TNINPFY IY K RIQQ L+Q NQ
Sbjct: 822 LTITLVKSYISY-TGKRNDPPSSGLIADNGSDPDHTNINPFYSIYPKERIQQLLRQKKNQ 880
Query: 57 GTISTLLNRNKECQSLIILSSSNCFRMDP 85
GTI TLLN KECQSLIILSSSNCFRM P
Sbjct: 881 GTICTLLN--KECQSLIILSSSNCFRMGP 907
>A1XK44_PHYAM (tr|A1XK44) RNA polymerase beta chain (Fragment) OS=Phytolacca
americana GN=rpoC2 PE=4 SV=1
Length = 862
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI L KS ISYI KRND S S++ SD TN+NPFY IYSKT++QQS QNQGT+
Sbjct: 413 LRIRLVKSTISYIG-KRND---SLFFSDDGSDHTNMNPFYSIYSKTKLQQSFNQNQGTVR 468
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LL NKECQS IILSSSNCFRM P
Sbjct: 469 MLLGINKECQSFIILSSSNCFRMGP 493
>A1XK07_LEEGU (tr|A1XK07) RNA polymerase beta chain (Fragment) OS=Leea guineensis
GN=rpoC2 PE=4 SV=1
Length = 829
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 67/89 (75%), Gaps = 7/89 (7%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESD--RTNINPFYPIYSKTRIQQSLKQ--NQ 56
L I L KS+ISY + KRNDP SG I++N SD TNINPFY IY K RIQQ L+Q NQ
Sbjct: 396 LTITLVKSYISY-TGKRNDPPSSGLIADNGSDPDHTNINPFYSIYPKERIQQLLRQKKNQ 454
Query: 57 GTISTLLNRNKECQSLIILSSSNCFRMDP 85
GTI TLLN KECQSLIILSSSNCFRM P
Sbjct: 455 GTICTLLN--KECQSLIILSSSNCFRMGP 481
>A1XK42_MAGTR (tr|A1XK42) RNA polymerase beta chain (Fragment) OS=Magnolia
tripetala GN=rpoC2 PE=4 SV=1
Length = 859
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 67/85 (78%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISYI KRND +GSG I +NESDRTNIN FY SKTRIQ SL Q+QGTI
Sbjct: 422 IRIDLVKSPISYIG-KRNDTAGSGLIPDNESDRTNINTFY---SKTRIQ-SLTQHQGTIR 476
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKECQS +ILSSS+C R+ P
Sbjct: 477 TFLNRNKECQSFLILSSSDCSRIGP 501
>A1XK41_LIRCH (tr|A1XK41) RNA polymerase beta chain (Fragment) OS=Liriodendron
chinense GN=rpoC2 PE=4 SV=1
Length = 839
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 67/85 (78%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISYI KRND +GSG I +NESDRTNIN FY SKTRIQ SL Q+QGTI
Sbjct: 402 IRIDLVKSPISYIG-KRNDTTGSGLIPDNESDRTNINTFY---SKTRIQ-SLTQHQGTIR 456
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKECQS +ILSSS+C R+ P
Sbjct: 457 TFLNRNKECQSFLILSSSDCSRIGP 481
>A9XWA7_POLCR (tr|A9XWA7) RNA polymerase beta'' subunit (Fragment) OS=Polygala
cruciata GN=rpoC2 PE=4 SV=1
Length = 1070
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQS-LKQNQGTI 59
LRI+LAKS ISYI RKRNDPSGSG I +NES+ TNINPFY I K++ QQS L QN GTI
Sbjct: 641 LRIDLAKSPISYI-RKRNDPSGSGLIYDNESEHTNINPFYSISFKSKSQQSLLSQNHGTI 699
Query: 60 STLLNRNKECQSLIILSSSNC 80
L NR +EC+SLIILSSSNC
Sbjct: 700 RMLWNRKEECRSLIILSSSNC 720
>A9XWA6_PLUAU (tr|A9XWA6) DNA-directed RNA polymerase OS=Plumbago auriculata
GN=rpoC2 PE=3 SV=1
Length = 1370
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 63/85 (74%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KS ISY + KRNDPSG + +N SDR +NPFY YSK R+QQS QNQGT+
Sbjct: 862 LRINLVKSTISY-AGKRNDPSGLELLYDNGSDR--LNPFYSSYSKARLQQSFNQNQGTVR 918
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR K C S +ILSSSNCFR+ P
Sbjct: 919 TLLNRTKACSSFMILSSSNCFRIGP 943
>A1XKA6_OENOR (tr|A1XKA6) RNA polymerase beta chain (Fragment) OS=Oenothera
organensis GN=rpoC2 PE=4 SV=1
Length = 796
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS I RKRNDPSGSG IS+N SD TNINPFY SK ++++S +QN GTI
Sbjct: 354 LRIDLVKSPI-LDPRKRNDPSGSGLISDNVSDHTNINPFY---SKPKMKKSPRQNHGTIR 409
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKEC SL+ILS+SNCFRM P
Sbjct: 410 TLLNQNKECPSLMILSASNCFRMGP 434
>A1XK20_9MAGN (tr|A1XK20) RNA polymerase beta chain (Fragment) OS=Ranunculus sp.
Qiu 95024 GN=rpoC2 PE=4 SV=1
Length = 862
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 67/85 (78%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
++++L KS ISY +RKRNDP GSG I N SD TN+NPFY SKTRI+QS ++QGTI
Sbjct: 423 IKMDLVKSPISY-TRKRNDPVGSGLIPANRSDHTNLNPFY---SKTRIKQSRIRHQGTIR 478
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKECQSLI LSSSNC R+ P
Sbjct: 479 TLLNKNKECQSLITLSSSNCSRIGP 503
>A9XW55_CANSA (tr|A9XW55) DNA-directed RNA polymerase (Fragment) OS=Cannabis
sativa GN=rpoC2 PE=3 SV=1
Length = 1275
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 72/85 (84%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINLAKS+I YI RKRNDP GSG IS+N SD TN PFY IYSK +IQQSL+QNQGTI
Sbjct: 846 LRINLAKSNICYI-RKRNDPLGSGLISDNRSDCTN--PFYSIYSKEKIQQSLRQNQGTIH 902
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR+KE QSLIILSSSNCF+M P
Sbjct: 903 TLLNRSKESQSLIILSSSNCFQMSP 927
>A9XWC7_9ROSA (tr|A9XWC7) DNA-directed RNA polymerase (Fragment) OS=Urtica urens
GN=rpoC2 PE=3 SV=1
Length = 1275
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L K HISYI RKRN+ G IS+N S+R INPFY IYS RIQQSL+QNQGTI
Sbjct: 840 IRIHLVKPHISYI-RKRNNLLGPELISDNRSNR--INPFYSIYSTERIQQSLRQNQGTIH 896
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T NR+KE +SLIILSS NCF+M P
Sbjct: 897 TFWNRSKESKSLIILSSGNCFQMYP 921
>A9QC90_TRACE (tr|A9QC90) DNA-directed RNA polymerase (Fragment) OS=Trachelium
caeruleum GN=rpoC2 PE=3 SV=1
Length = 1394
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 67/89 (75%), Gaps = 5/89 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYS--KTRIQQSLKQNQGT 58
LRI+L KS ISY + KRND SGSG IS SDRTNINPF IYS + RIQ+ L QNQGT
Sbjct: 871 LRIDLVKSTISY-TIKRNDFSGSGLISEPGSDRTNINPFSSIYSYSRARIQEPLNQNQGT 929
Query: 59 ISTLLNRNKECQSLIILSSSN--CFRMDP 85
I T+LNRNK+CQS IILSSSN C RM P
Sbjct: 930 IHTVLNRNKKCQSFIILSSSNCSCSRMGP 958
>A6YAK6_9MAGN (tr|A6YAK6) RNA polymerase beta' subunit (Fragment) OS=Haloragis
aspera GN=rpoC2 PE=4 SV=1
Length = 841
Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISYI RKRNDPS G I NN SD TNI+PFY SK IQQ L QN GTI
Sbjct: 424 LRIDLVKSPISYI-RKRNDPSDLGLIYNNGSDNTNIHPFY---SKAWIQQPLSQNHGTIR 479
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TL NR KECQSLIILSSS C RM
Sbjct: 480 TLFNRTKECQSLIILSSSTCSRM 502
>A6YAL3_9MAGN (tr|A6YAL3) RNA polymerase beta' subunit (Fragment) OS=Paeonia
brownii GN=rpoC2 PE=4 SV=1
Length = 862
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L + I + KRNDPSGSG IS+N SD T I PFY +K RI+QSL QNQGTI
Sbjct: 423 LRIDLVQPPI-MCTGKRNDPSGSGLISDNGSDCTTITPFYS-KAKARIKQSLSQNQGTIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKECQSLIILSSSNC RM P
Sbjct: 481 TLLNKNKECQSLIILSSSNCSRMGP 505
>A1XK12_9MAGN (tr|A1XK12) RNA polymerase beta chain (Fragment) OS=Tetracentron
sinense GN=rpoC2 PE=4 SV=1
Length = 792
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRND SGSG I +N SDR NINPFY SK IQQ L Q+ GTI
Sbjct: 354 IRMDLVKSPISY-TGKRNDLSGSGLIPDNGSDRININPFY---SKASIQQLLSQHPGTIR 409
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN ECQSLIILSSSNC RM P
Sbjct: 410 TLLNRNNECQSLIILSSSNCSRMGP 434
>Q4FFY7_RANMC (tr|Q4FFY7) DNA-directed RNA polymerase (Fragment) OS=Ranunculus
macranthus GN=rpoC2 PE=3 SV=1
Length = 1376
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
++++L K ISY +RKRNDP GSG I N SD TN+NPFY SK I+QSL ++QGTI
Sbjct: 871 IKMDLVKYPISY-TRKRNDPVGSGLIPVNGSDHTNLNPFY---SKASIKQSLIRHQGTIR 926
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKECQSLI LSSSNC R+DP
Sbjct: 927 TLLNKNKECQSLITLSSSNCSRIDP 951
>A9QBM2_MUSAC (tr|A9QBM2) DNA-directed RNA polymerase (Fragment) OS=Musa
acuminata GN=rpoC2 PE=3 SV=1
Length = 1359
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 65/85 (76%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + SG IS+N DRTNINPF+ K RIQ SL Q+QGTI
Sbjct: 865 IRIELVKSTISY-TGKRYDRASSGLISDNGLDRTNINPFF---YKARIQ-SLTQHQGTIG 919
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNCFR+ P
Sbjct: 920 TLLNRNKECQSLIILSSSNCFRIGP 944
>A1XK18_9MAGN (tr|A1XK18) RNA polymerase beta chain (Fragment) OS=Sargentodoxa
cuneata GN=rpoC2 PE=4 SV=1
Length = 861
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++LAKS IS + KRNDP+GSG I +N SD TN+NPFY K RI QSL Q+ GTI
Sbjct: 423 IRMDLAKSLISS-TGKRNDPAGSGLIPDNGSDCTNLNPFY---CKARIPQSLNQHHGTIR 478
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS IILSSSNC RM P
Sbjct: 479 TLLNRNKECQSFIILSSSNCSRMGP 503
>A1XK36_TASIN (tr|A1XK36) RNA polymerase beta chain (Fragment) OS=Tasmannia
insipida GN=rpoC2 PE=4 SV=1
Length = 825
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISYI KRND +GSG I +N SD TNINPFY SK R QSL Q+QGTI
Sbjct: 384 IRIDLVKSPISYIG-KRNDMAGSGLIPDNGSDHTNINPFY---SKARRIQSLTQHQGTIR 439
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS +ILS SNC R+ P
Sbjct: 440 TLLNRNKECQSFLILSLSNCSRIGP 464
>A6YAL2_9MAGN (tr|A6YAL2) RNA polymerase beta' subunit (Fragment) OS=Myriophyllum
sp. Broch s.n. GN=rpoC2 PE=4 SV=1
Length = 805
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 61/83 (73%), Gaps = 4/83 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI KRNDPS SG I N SD TNI+PFY SK IQQ L QN TI
Sbjct: 425 LRIDLLKSHISYIG-KRNDPSDSGLIYNKGSDNTNIHPFY---SKAWIQQPLSQNHETIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TL NR KECQSLIILSSSNC R+
Sbjct: 481 TLFNRTKECQSLIILSSSNCSRV 503
>A9XW43_ALNVI (tr|A9XW43) DNA-directed RNA polymerase (Fragment) OS=Alnus viridis
subsp. sinuata GN=rpoC2 PE=3 SV=1
Length = 1273
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSHISYI RKR D SGSG I ++ SD NINPFY IYSK RIQQSL QNQ TI
Sbjct: 836 LRIDLVKSHISYI-RKRKDLSGSGLIFDDRSDPNNINPFYSIYSKARIQQSLSQNQVTIR 894
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN NKE QSLIILSSSNCF+M P
Sbjct: 895 TLLNSNKESQSLIILSSSNCFQMGP 919
>A9XWA3_PARPL (tr|A9XWA3) DNA-directed RNA polymerase (Fragment) OS=Parnassia
palustris GN=rpoC2 PE=3 SV=1
Length = 1267
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KSH SYI RKRND S SG I N S+ N N P Y K +IQQSL QNQGT S
Sbjct: 840 LRINLVKSHSSYI-RKRNDSSSSGFIYENASEWANTNK-NPFYLKAKIQQSLIQNQGTTS 897
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QS IILSS NCFRM P
Sbjct: 898 TLLNRNKEFQSSIILSSPNCFRMGP 922
>A9XW79_9ROSI (tr|A9XW79) DNA-directed RNA polymerase (Fragment) OS=Helianthemum
canum GN=rpoC2 PE=3 SV=1
Length = 1279
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Query: 1 LRINLAKSHISYISRKRND--PSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGT 58
LR++L KS I Y RKRND PSGSG I +N S RTN NPFY SK R+QQS +QN GT
Sbjct: 841 LRLDLVKSAILY-RRKRNDLSPSGSGLIYDNGSYRTNQNPFY---SKARVQQSFRQNHGT 896
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I T LNRNKE QSLIILSS+NCF + P
Sbjct: 897 IRTFLNRNKESQSLIILSSANCFNVGP 923
>A9XWD0_9ROSA (tr|A9XWD0) DNA-directed RNA polymerase (Fragment) OS=Zelkova
serrata GN=rpoC2 PE=3 SV=1
Length = 1247
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/86 (74%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KSHISYI RKRN+ GSG I +N SDRTN PFY IYSK RIQ+ L+QNQGTI
Sbjct: 812 LRINLVKSHISYI-RKRNNLLGSGLIFDNRSDRTN--PFYSIYSKERIQKLLRQNQGTIH 868
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
TLLNR+KE QSLIILSSSNCF+M P
Sbjct: 869 TLLNRSKESQSLIILSSSNCFQMGPL 894
>A1XKE6_9MAGN (tr|A1XKE6) RNA polymerase beta chain (Fragment) OS=Degeneria
vitiensis GN=rpoC2 PE=4 SV=1
Length = 765
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+LAKS I YI KRND +GSG I +N SDRTNIN FY SK RIQ SL Q+QGTI
Sbjct: 369 IRIDLAKSPILYIG-KRNDTAGSGWIPDNGSDRTNINTFY---SKARIQ-SLTQHQGTIR 423
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKECQS +ILSSS+C R+ P
Sbjct: 424 TFLNRNKECQSFLILSSSDCSRIGP 448
>A1XK37_DRIWI (tr|A1XK37) RNA polymerase beta chain (Fragment) OS=Drimys winteri
GN=rpoC2 PE=4 SV=1
Length = 840
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS I Y + KRND +GSG I +N SD TNINPFY SK R QSL Q+QGTI
Sbjct: 398 IRIDLVKSPILY-TGKRNDMAGSGLIPDNGSDHTNINPFY---SKVRRIQSLTQHQGTIR 453
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS +ILSSSNC R+ P
Sbjct: 454 TLLNRNKECQSFLILSSSNCSRIGP 478
>D3J8G5_9FABA (tr|D3J8G5) DNA-directed RNA polymerase OS=Vigna radiata GN=rpoC2
PE=3 SV=1
Length = 1371
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+++L KSHISYI RKR DP S I +NE D TNINPF+ + + ++QQSL +N GTI
Sbjct: 874 LKMDLVKSHISYI-RKRKDPLSSRFILDNELDWTNINPFFSMDPREKVQQSLSKNHGTIH 932
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
LLNRN++C+SLIILSSSNCF++
Sbjct: 933 MLLNRNEKCRSLIILSSSNCFQI 955
>A1XK14_9MAGN (tr|A1XK14) RNA polymerase beta chain (Fragment) OS=Sabia sp. Qiu
91025 GN=rpoC2 PE=4 SV=1
Length = 863
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS I Y + KRNDP+GSG I +N DRT INPFY SK RI QS Q+QGT
Sbjct: 425 IRMDLVKSPILY-TGKRNDPAGSGLIPDNGLDRTTINPFY---SKARIPQSFSQHQGTFR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS IILSSSN RM P
Sbjct: 481 TLLNRNKECQSFIILSSSNYSRMGP 505
>A1XK34_9MAGN (tr|A1XK34) RNA polymerase beta chain (Fragment) OS=Hedyosmum
arborescens GN=rpoC2 PE=4 SV=1
Length = 869
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 66/85 (77%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISY + KRND + SG I +N SDRT INPFY SK RIQ SL Q+QGTI
Sbjct: 425 IRIDLVKSPISY-TVKRNDTASSGLIPDNGSDRTTINPFY---SKARIQ-SLTQHQGTIR 479
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC+SLI+LSSSNC R+ P
Sbjct: 480 TLLNRNKECESLILLSSSNCSRIGP 504
>A1XK15_9MAGN (tr|A1XK15) RNA polymerase beta chain (Fragment) OS=Grevillea
robusta GN=rpoC2 PE=4 SV=1
Length = 854
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 66/87 (75%), Gaps = 6/87 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRNDP GS I +N SDRTNINPF YSK RIQ+ L+Q QGT+
Sbjct: 430 IRMDLVKSPISY-TGKRNDPRGSRLIPDNGSDRTNINPF---YSKVRIQELLRQQQGTVR 485
Query: 61 TLLNR--NKECQSLIILSSSNCFRMDP 85
T L+R NKECQSLIILSSSNC +M P
Sbjct: 486 TFLHRNQNKECQSLIILSSSNCSQMGP 512
>A9XW59_9ROSA (tr|A9XW59) DNA-directed RNA polymerase (Fragment) OS=Celtis
occidentalis GN=rpoC2 PE=3 SV=1
Length = 1259
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 71/85 (83%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KS+I YI RKRND GSG IS+N SD TN PFY IYSK RIQQSL+QNQGTI
Sbjct: 839 LRINLTKSNILYI-RKRNDLLGSGLISDNRSDCTN--PFYSIYSKERIQQSLRQNQGTIH 895
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR+KE QSLIILSSSNCF+M+P
Sbjct: 896 TLLNRSKESQSLIILSSSNCFQMNP 920
>A9XW61_9MYRT (tr|A9XW61) DNA-directed RNA polymerase (Fragment) OS=Clidemia
dentata GN=rpoC2 PE=3 SV=1
Length = 1275
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSL-KQNQGTI 59
LRI+L KS ISY RKRN GSG IS+N SD TN NPFY IYSK +++QSL QN GTI
Sbjct: 836 LRIDLVKSAISY-RRKRN---GSGFISDNVSDHTNSNPFYSIYSKRKMKQSLNHQNHGTI 891
Query: 60 STLLNRNKECQSLIILSSSNCFRMD 84
TLLN NKE SLIIL SSNCFRMD
Sbjct: 892 RTLLNNNKEYPSLIILLSSNCFRMD 916
>A1XK76_9LILI (tr|A1XK76) RNA polymerase beta chain (Fragment) OS=Strelitzia
reginae GN=rpoC2 PE=4 SV=1
Length = 853
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + SG IS+N DRTNINPFY K RIQ SL Q QGTI
Sbjct: 414 IRIELVKSTISY-TGKRYDKASSGLISDNGLDRTNINPFY---CKARIQ-SLTQQQGTIG 468
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC R+ P
Sbjct: 469 TLLNRNKECQSLIILSSSNCSRIGP 493
>A1XK21_9MAGN (tr|A1XK21) RNA polymerase beta chain (Fragment) OS=Cocculus
trilobus GN=rpoC2 PE=4 SV=1
Length = 865
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 65/85 (76%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
++++L K ISY + KRN+P GSG IS N SDRTN+NPF+ SK RIQQSL Q+Q TI
Sbjct: 425 IKMDLVKPPISY-TGKRNNPVGSGLISVNRSDRTNLNPFF---SKARIQQSLTQHQVTIR 480
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
L NRNKECQSLIILSSSNC R+ P
Sbjct: 481 MLGNRNKECQSLIILSSSNCSRIGP 505
>A1XK52_9LAMI (tr|A1XK52) RNA polymerase beta chain (Fragment) OS=Lamium sp. Qiu
95019 GN=rpoC2 PE=4 SV=1
Length = 866
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQ--SLKQNQGT 58
LRI+L KS SYI KRNDPSGSG SNN SD T INPF IYSK IQQ +L QN+ T
Sbjct: 420 LRIDLLKSTFSYIG-KRNDPSGSGLFSNNGSDCTKINPFASIYSKAIIQQPLTLNQNKRT 478
Query: 59 ISTLLNRNKECQSLIILSSSNCFRM 83
+ LLNRN QSLIILSSSNCFRM
Sbjct: 479 LHKLLNRNAGFQSLIILSSSNCFRM 503
>A1XKE9_PASSB (tr|A1XKE9) RNA polymerase beta chain (Fragment) OS=Passiflora
suberosa GN=rpoC2 PE=4 SV=1
Length = 773
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 64/87 (73%), Gaps = 2/87 (2%)
Query: 1 LRINL--AKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGT 58
L+I+L A+ IS I+RKRND G G IS+ D NIN F+ IYSK +IQQSLKQNQ T
Sbjct: 328 LKIDLNSAEFRISNINRKRNDSLGLGWISHIRLDHANINSFFSIYSKAKIQQSLKQNQVT 387
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
STLLNRN++CQ + LS SNCF++DP
Sbjct: 388 RSTLLNRNQKCQFFVFLSPSNCFQVDP 414
>A6YAJ9_9MAGN (tr|A6YAJ9) RNA polymerase beta' subunit (Fragment)
OS=Aphanopetalum resinosum GN=rpoC2 PE=4 SV=1
Length = 811
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 65/87 (74%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLK-QNQGTI 59
LRI+L KS ISY S KRN PSGSG IS+ SD +INPFYP K IQQ L+ QNQGTI
Sbjct: 422 LRIDLVKSPISY-SGKRNGPSGSGLISDTGSD--HINPFYP---KVWIQQPLQIQNQGTI 475
Query: 60 STLLNRNKECQSLIILSSSNCFRMDPC 86
TLLNRNKECQSL ILSSSNC R+ P
Sbjct: 476 RTLLNRNKECQSLRILSSSNCSRIGPL 502
>A1XK40_9MAGN (tr|A1XK40) RNA polymerase beta chain (Fragment) OS=Eupomatia
bennettii GN=rpoC2 PE=4 SV=1
Length = 859
Score = 97.4 bits (241), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L K ISYI KRND +GSG I +N SDRTNIN FYP K R+Q SL Q+QGTI
Sbjct: 420 IRIDLVKFPISYIG-KRNDTAGSGLIPDNVSDRTNINTFYP---KARVQ-SLTQHQGTIR 474
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNR KECQS +ILSSS+C R+ P
Sbjct: 475 TFLNRKKECQSFLILSSSDCSRIGP 499
>A1XKE3_CHLMT (tr|A1XKE3) RNA polymerase beta chain (Fragment) OS=Chloranthus
multistachys GN=rpoC2 PE=4 SV=1
Length = 827
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RINL KS ISY + KRND + SG I +N SDR NINPF K R+Q SL Q+QGTI
Sbjct: 396 IRINLVKSPISY-TVKRNDTASSGLIPDNASDRPNINPFD---FKARVQ-SLTQHQGTIR 450
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC R+ P
Sbjct: 451 TLLNRNKECQSLIILSSSNCSRIGP 475
>A9XW75_9ROSA (tr|A9XW75) DNA-directed RNA polymerase OS=Ficus sp. Moore 315
GN=rpoC2 PE=3 SV=1
Length = 1391
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 69/85 (81%), Gaps = 3/85 (3%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRINL KSHISYI RKRNDP GS IS+N SDR INP Y I SK IQQSLK+NQGTI
Sbjct: 879 LRINLVKSHISYI-RKRNDPLGSVLISDNRSDR--INPSYSICSKESIQQSLKENQGTIH 935
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR+K+ QSLIILSSSNCF+M P
Sbjct: 936 TLLNRSKDSQSLIILSSSNCFQMGP 960
>A6YAM0_9MAGN (tr|A6YAM0) RNA polymerase beta' subunit (Fragment) OS=Saxifraga
stolonifera GN=rpoC2 PE=4 SV=1
Length = 830
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI++ KS ISY + K N PS SG I +N SDRTNINPFY SK IQQ L QNQGTI
Sbjct: 410 LRIHVVKSPISY-TGKSNGPSSSGLIYDNGSDRTNINPFY---SKASIQQPLSQNQGTIR 465
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
L +RNKE QSL+ILSSSNC +M P
Sbjct: 466 MLFDRNKEFQSLLILSSSNCSQMGP 490
>A1XK05_SPIOL (tr|A1XK05) RNA polymerase beta chain (Fragment) OS=Spinacia
oleracea GN=rpoC2 PE=4 SV=1
Length = 839
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIY--SKTRIQQSLKQNQGT 58
L++NL K ISYIS KRNDPS SD TN+NPFY IY KT++Q+S QNQGT
Sbjct: 400 LKVNLVKPAISYIS-KRNDPSSE---KKEGSDHTNMNPFYSIYIYPKTKLQKSFNQNQGT 455
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
+ TLL NKECQ +ILSSSNCFR+ P
Sbjct: 456 VRTLLGINKECQFFLILSSSNCFRIGP 482
>A1XK92_9MAGN (tr|A1XK92) RNA polymerase beta chain (Fragment) OS=Atherosperma
moschatum GN=rpoC2 PE=4 SV=1
Length = 857
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS I YI KRND + SG I NN SDRTNINPFY K RIQ SL Q+QGTI
Sbjct: 420 IRIDLVKSPILYIG-KRNDTASSGLIPNNGSDRTNINPFY---FKARIQ-SLTQHQGTIR 474
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC S +ILSSS+C R+ P
Sbjct: 475 TLLNRNKECPSFLILSSSDCSRIGP 499
>A1XK87_ARIMA (tr|A1XK87) RNA polymerase beta chain (Fragment) OS=Aristolochia
macrophylla GN=rpoC2 PE=4 SV=1
Length = 832
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISY + KRND GSG +N SDRTNINPFYP K +IQ SL Q+QGTI
Sbjct: 395 IRIDLVKSPISY-TEKRNDRGGSGLNLDNGSDRTNINPFYP---KAKIQ-SLTQHQGTIH 449
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLN+NK+CQS +ILSSSNC R+ P
Sbjct: 450 MLLNKNKQCQSFLILSSSNCSRIGP 474
>A1XKE5_9MAGN (tr|A1XKE5) RNA polymerase beta chain (Fragment) OS=Cissampelos
pareira GN=rpoC2 PE=4 SV=1
Length = 774
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 63/85 (74%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
++++ K ISY + KRNDP GSG IS N DRTN+NPF+ SK RIQQSL Q+Q TI
Sbjct: 337 IKMDSVKPPISY-TGKRNDPVGSGLISVNRPDRTNLNPFF---SKERIQQSLTQHQVTIR 392
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
L NRNKECQSLIILSSSNC R+ P
Sbjct: 393 MLGNRNKECQSLIILSSSNCSRIGP 417
>A1XK94_9MAGN (tr|A1XK94) RNA polymerase beta chain (Fragment) OS=Hortonia
floribunda GN=rpoC2 PE=4 SV=1
Length = 790
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS I YI KRND + SG I NN SDRTNINPFY K RI SL Q+QGTI
Sbjct: 389 LRIDLVKSPILYIG-KRNDMASSGLIPNNGSDRTNINPFY---FKARIP-SLTQHQGTIR 443
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC S +ILSSS+C RM P
Sbjct: 444 TLLNRNKECPSFLILSSSDCSRMGP 468
>A1XK33_9MAGN (tr|A1XK33) RNA polymerase beta chain (Fragment) OS=Sarcandra
chloranthoides GN=rpoC2 PE=4 SV=1
Length = 849
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KRND + SG I +N SDRTN+NPF K R+Q SL Q+QGTI
Sbjct: 405 IRIYLVKSPISY-TGKRNDTASSGLIPDNASDRTNLNPFD---FKARVQ-SLTQHQGTIR 459
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC R+ P
Sbjct: 460 TLLNRNKECQSLIILSSSNCSRIGP 484
>A1XKC9_9MAGN (tr|A1XKC9) RNA polymerase beta chain (Fragment) OS=Takhtajania
perrieri GN=rpoC2 PE=4 SV=1
Length = 746
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L K ISY + KRND +GSG I N SD TNINPFY SK R QSL Q+QGTI
Sbjct: 382 IRIDLVKYPISY-TGKRNDMAGSGLIPENGSDHTNINPFY---SKARRIQSLTQHQGTIR 437
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QS +ILSSSNC R+ P
Sbjct: 438 TLLNRNKERQSFLILSSSNCSRIGP 462
>Q4FFZ0_ACOAM (tr|Q4FFZ0) DNA-directed RNA polymerase (Fragment) OS=Acorus
americanus GN=rpoC2 PE=3 SV=1
Length = 1386
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS I Y + KR D +GSG I +N SDRTNINP +Y K +I S Q+QGT+
Sbjct: 871 IRIELCKSAILY-TGKRKDIAGSGLIHDNVSDRTNINP---VYLKDKIP-SFIQHQGTVG 925
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLI+LSSSNCFR+ P
Sbjct: 926 TLLNRNKECQSLILLSSSNCFRIGP 950
>A1XK67_9MAGN (tr|A1XK67) RNA polymerase beta chain (Fragment) OS=Chimonanthus
praecox GN=rpoC2 PE=4 SV=1
Length = 857
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+++L KS I YI KRND + SG I NN SDRTNINPFY K RIQ SL Q+QGTI
Sbjct: 422 LKMDLVKSPILYIG-KRNDTTSSGFIPNNGSDRTNINPFY---FKARIQ-SLTQHQGTIR 476
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQS +ILSSS+C R+
Sbjct: 477 TLLNRNKECQSFLILSSSDCSRI 499
>A1XK82_9ASPA (tr|A1XK82) RNA polymerase beta chain (Fragment) OS=Blandfordia
grandiflora GN=rpoC2 PE=4 SV=1
Length = 856
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI L KS ISY + KR D +GSG I +N DR NINPFY SK +IQ S Q+QGTI
Sbjct: 415 LRIELVKSTISY-TVKRYDTAGSGLIPDNGLDRPNINPFY---SKAKIQ-SFTQHQGTIG 469
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC+SLIILSS+NCFR+ P
Sbjct: 470 IGTLLNRNKECRSLIILSSANCFRIGP 496
>A1XK23_9MAGN (tr|A1XK23) RNA polymerase beta chain (Fragment) OS=Euptelea
polyandra GN=rpoC2 PE=4 SV=1
Length = 796
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 64/89 (71%), Gaps = 8/89 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDR----TNINPFYPIYSKTRIQQSLKQNQ 56
+R++L KS ISY + KRNDP+GSG +N SDR TN+N FY SK RIQQ L +Q
Sbjct: 423 IRMDLVKSPISY-TGKRNDPAGSGLSPDNGSDRNRTNTNLNSFY---SKARIQQYLTHHQ 478
Query: 57 GTISTLLNRNKECQSLIILSSSNCFRMDP 85
GTI TLLN N ECQSLIILSSSNC RM P
Sbjct: 479 GTIRTLLNINTECQSLIILSSSNCSRMGP 507
>A1XK66_CALFL (tr|A1XK66) RNA polymerase beta chain (Fragment) OS=Calycanthus
floridus GN=rpoC2 PE=4 SV=1
Length = 861
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 63/83 (75%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L+I+L KS I Y S KRND + SG I NN SDRTNINPFY K RIQ SL Q+QGTI
Sbjct: 422 LKIDLVKSPILY-SGKRNDTTSSGFIPNNGSDRTNINPFY---FKARIQ-SLTQHQGTIR 476
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQS +ILSSS+C R+
Sbjct: 477 TLLNRNKECQSFLILSSSDCSRI 499
>A1XK38_CANOD (tr|A1XK38) RNA polymerase beta chain (Fragment) OS=Cananga odorata
GN=rpoC2 PE=4 SV=1
Length = 807
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 5/86 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+LA+ ISYI KRND +GSG I NN SDRTNINP + SK RIQ SL Q+QGTI
Sbjct: 368 IRIDLARPPISYIG-KRNDTAGSGLIPNNGSDRTNINP---LSSKARIQ-SLTQHQGTIH 422
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
T LNRNKECQS ILSSS+C R+ P
Sbjct: 423 TFLNRNKECQSFRILSSSDCSRICPV 448
>A9XW45_9ROSI (tr|A9XW45) DNA-directed RNA polymerase (Fragment) OS=Anisoptera
marginata GN=rpoC2 PE=3 SV=1
Length = 1259
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 66/85 (77%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS YI RKRNDPSGSG IS+NE D T NPFY SK+RIQQS +QN GTI
Sbjct: 836 LRIDLVKSSNLYI-RKRNDPSGSGLISDNELDSTTKNPFY---SKSRIQQSFRQNHGTIR 891
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSLIILSSSNCF M P
Sbjct: 892 TLLNRNKESQSLIILSSSNCFYMGP 916
>A1XK81_9POAL (tr|A1XK81) RNA polymerase beta chain (Fragment) OS=Stegolepis sp.
Qiu 97132 GN=rpoC2 PE=4 SV=1
Length = 836
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 64/88 (72%), Gaps = 5/88 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFY---PIYSKTRIQQSLKQNQG 57
+RI L KS ISY + KR D + S I +N DRTNINPFY IYSK +IQ SL Q+QG
Sbjct: 390 IRIELVKSIISY-TGKRYDRASSEWIPDNGLDRTNINPFYSKAKIYSKAKIQ-SLNQHQG 447
Query: 58 TISTLLNRNKECQSLIILSSSNCFRMDP 85
T+ TLLNRNKECQSL ILSSSNC R+ P
Sbjct: 448 TMGTLLNRNKECQSLRILSSSNCSRIGP 475
>A1XK79_9POAL (tr|A1XK79) RNA polymerase beta chain (Fragment) OS=Vriesea
splendens GN=rpoC2 PE=4 SV=1
Length = 849
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + SG I NN D TNINPFY SK +IQ SL Q+QGTI
Sbjct: 410 IRIELVKSTISY-TGKRYDRASSGLIPNNGLDCTNINPFY---SKAKIQ-SLSQHQGTIG 464
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKECQSLIILSSSNC R+ P
Sbjct: 465 MLLNRNKECQSLIILSSSNCSRIGP 489
>Q4FFY5_9ASPA (tr|Q4FFY5) DNA-directed RNA polymerase (Fragment) OS=Yucca
schidigera GN=rpoC2 PE=3 SV=1
Length = 1384
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D +GSG I +N DRTNINPFY SK +I + Q+Q T+
Sbjct: 870 IRIELVKSTISY-TGKRYDTAGSGLIPDNGLDRTNINPFY---SKGKIPL-VTQHQETVG 924
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSS NCFR+ P
Sbjct: 925 TLLNRNKECQSLIILSSFNCFRVGP 949
>A1XKA4_9MAGN (tr|A1XKA4) RNA polymerase beta chain (Fragment) OS=Doryphora
sassafras GN=rpoC2 PE=4 SV=1
Length = 759
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS I YI KRND + SG I NN SD TNINPFY K RIQ S Q+QGTI
Sbjct: 322 IRIDLVKSPILYIG-KRNDTASSGLIPNNGSDHTNINPFY---FKARIQ-SFTQHQGTIR 376
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC S +ILSSS+C R+ P
Sbjct: 377 TLLNRNKECPSFLILSSSDCSRIGP 401
>A1XKD8_AGAAE (tr|A1XKD8) RNA polymerase beta chain (Fragment) OS=Agave attenuata
GN=rpoC2 PE=4 SV=1
Length = 761
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D +GSG I +N DRTNINPFY SK +I + Q+Q T+
Sbjct: 331 IRIELVKSTISY-TGKRYDTAGSGLIPDNGLDRTNINPFY---SKGKIPL-VTQHQETVG 385
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSS NCFR+ P
Sbjct: 386 TLLNRNKECQSLIILSSFNCFRVGP 410
>C7SM29_9POAL (tr|C7SM29) DNA-directed RNA polymerase (Fragment) OS=Joinvillea
plicata GN=rpoC2 PE=3 SV=1
Length = 1382
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + SGPI NN DRTN N FY SK +IQ SL Q+QG I
Sbjct: 870 IRIELVKSTISY-TEKRYDRTSSGPIPNNRLDRTNTNSFY---SKAKIQ-SLSQHQGAIG 924
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKECQSL+ILS+SNC R+
Sbjct: 925 TLLNRNKECQSLMILSASNCSRI 947
>A1XKC7_XANQU (tr|A1XKC7) RNA polymerase beta chain (Fragment) OS=Xanthorrhoea
quadrangulata GN=rpoC2 PE=4 SV=1
Length = 811
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D +GSG I N DRTNINPFY SK +I Q+QGTI
Sbjct: 372 IRIELVKSTISY-TGKRYDTAGSGLIPENGLDRTNINPFY---SKAKIPL-FTQHQGTIG 426
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSS NC R+ P
Sbjct: 427 TLLNRNKECQSLIILSSFNCSRVGP 451
>B7T3F3_9ROSI (tr|B7T3F3) DNA-directed RNA polymerase OS=Geranium macrorrhizum
GN=rpoC2 PE=3 SV=1
Length = 1421
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 66/92 (71%), Gaps = 10/92 (10%)
Query: 1 LRINLAKSH--ISYISRKRNDPSGSGPISNNESDRTNINPF---YPIYSKTR--IQQSLK 53
L+INL KS ISYI RKR+DP+G SNN + TNINPF Y IYSK + ++Q L
Sbjct: 890 LKINLGKSQSQISYI-RKRDDPAGLP--SNNGPNCTNINPFSSRYSIYSKPKASLRQPLS 946
Query: 54 QNQGTISTLLNRNKECQSLIILSSSNCFRMDP 85
QNQGTI TL NRNKEC S IILSSSNCF++ P
Sbjct: 947 QNQGTIRTLWNRNKECHSFIILSSSNCFQLGP 978
>A1XKA1_9MAGN (tr|A1XKA1) RNA polymerase beta chain (Fragment) OS=Hernandia
ovigera GN=rpoC2 PE=4 SV=1
Length = 843
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LR++L K I Y+ KRND + SG ISNN SD TN NPFY SK RIQ S+ Q+QGTI
Sbjct: 423 LRMDLVKYPILYVG-KRNDMASSGLISNNGSDHTNSNPFY---SKARIQ-SITQHQGTIR 477
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS ILSSS+C R+ P
Sbjct: 478 TLLNRNKECQSFQILSSSDCSRIGP 502
>A1XKB7_GALBE (tr|A1XKB7) RNA polymerase beta chain (Fragment) OS=Galbulimima
belgraveana GN=rpoC2 PE=4 SV=1
Length = 811
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++ KS + YI KRND +GSG I +N SDR NIN FY SK RIQ +L Q+QGTI
Sbjct: 382 IRMDWVKSPVLYIG-KRNDTAGSGLIPDNGSDRININTFY---SKARIQ-TLTQHQGTIR 436
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKECQS +ILSSS+C R+ P
Sbjct: 437 TFLNRNKECQSFLILSSSDCSRIGP 461
>D4PBA1_PHODC (tr|D4PBA1) DNA-directed RNA polymerase OS=Phoenix dactylifera
GN=rpoC2 PE=3 SV=1
Length = 1381
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + S IS+N DRTNINPFY SK +IQ SL Q+QGTI
Sbjct: 863 IRIELVKSTISY-TGKRYDRASSVLISDNGLDRTNINPFY---SKAKIQ-SLTQHQGTIG 917
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSSSNC R+ P
Sbjct: 918 IGTLLNRNKECQSLIILSSSNCSRIGP 944
>A1XKA5_9MAGN (tr|A1XKA5) RNA polymerase beta chain (Fragment) OS=Cryptocarya
meisneriana GN=rpoC2 PE=4 SV=1
Length = 712
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS I YI KRND + SG I NN SDRTNINPFY K RIQ SL Q+QGTI
Sbjct: 316 IRMDLVKSSIFYIG-KRNDTASSGLIPNNGSDRTNINPFY---FKARIQ-SLTQHQGTIR 370
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE S +ILSSS+C R+ P
Sbjct: 371 TLLNRNKEYPSFLILSSSDCSRIGP 395
>Q5QA61_ACOGR (tr|Q5QA61) RpoC2 (Fragment) OS=Acorus gramineus GN=rpoC2 PE=4 SV=1
Length = 602
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS I Y + KR D +GSG I +N SDRTNINP +Y K +I S Q+QGT+
Sbjct: 87 IRIELCKSAILY-TGKRKDIAGSGLIHDNVSDRTNINP---VYLKDKIP-SFTQHQGTVG 141
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLI+LSSSNC R+ P
Sbjct: 142 TLLNRNKECQSLILLSSSNCSRIGP 166
>A1XKA8_CINCA (tr|A1XKA8) RNA polymerase beta chain (Fragment) OS=Cinnamomum
camphora GN=rpoC2 PE=4 SV=1
Length = 777
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS I YI KRND + SG I+NN SDRTNINPFY K RIQ S Q+QGTI
Sbjct: 376 IRIDLVKSSIFYIG-KRNDMASSGLIANNGSDRTNINPFY---FKARIQ-SFTQHQGTIR 430
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKEC S +IL SS+C R+
Sbjct: 431 TLLNRNKECPSFLILLSSDCSRI 453
>A1XKD4_MYRFG (tr|A1XKD4) RNA polymerase beta chain (Fragment) OS=Myristica
fragrans GN=rpoC2 PE=4 SV=1
Length = 774
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRND + SG I +N S+RTNIN FY SK RIQ SL Q+QGTI
Sbjct: 375 LRIDLVKSPISY-NGKRNDTASSGLIPDNGSNRTNINTFY---SKARIQ-SLTQHQGTIR 429
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKECQS +ILSSS+C ++ P
Sbjct: 430 TFLNRNKECQSFLILSSSDCSQIGP 454
>A1XKA3_9LILI (tr|A1XKA3) RNA polymerase beta chain (Fragment) OS=Alstroemeria
sp. Qiu 96143 GN=rpoC2 PE=4 SV=1
Length = 831
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 62/87 (71%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+++ L KS I Y S KR GSG IS E DRTNINPF SK +IQ SL Q+QGTIS
Sbjct: 388 IKMELTKSTILY-SGKRYHTVGSGLISEKELDRTNINPFQ---SKAKIQ-SLTQHQGTIS 442
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKECQS IILSSSNC RMDP
Sbjct: 443 VGTLLNQNKECQSFIILSSSNCLRMDP 469
>A1XKF2_9MAGN (tr|A1XKF2) RNA polymerase beta chain (Fragment) OS=Mauloutchia
chapelieri GN=rpoC2 PE=4 SV=1
Length = 759
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS ISY + KRND + SG I +N S+RTNIN FY SK RIQ SL Q+QGTI
Sbjct: 374 LRIDLVKSPISY-NGKRNDTASSGLIPDNGSNRTNINTFY---SKARIQ-SLTQHQGTIR 428
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKECQS +ILSSS+C ++ P
Sbjct: 429 TFLNRNKECQSFLILSSSDCSQIGP 453
>A1XKF3_9MAGN (tr|A1XKF3) RNA polymerase beta chain (Fragment) OS=Hedycarya
arborea GN=rpoC2 PE=4 SV=1
Length = 761
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L S I YI KRND + SG I NN SDRTNINPFY K RI SL Q+QGTI
Sbjct: 374 LRIDLVNSPILYIG-KRNDTASSGLIPNNGSDRTNINPFY---FKARIP-SLTQHQGTIR 428
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC S +ILSSS+C R+ P
Sbjct: 429 TLLNRNKECPSFLILSSSDCSRIRP 453
>A1XK30_ACOCL (tr|A1XK30) RNA polymerase beta chain (Fragment) OS=Acorus calamus
GN=rpoC2 PE=4 SV=1
Length = 838
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS I Y + KR D +GSG I +N SDRTNIN +Y K +I S Q+QGT+
Sbjct: 399 IRIELCKSAILY-TGKRKDIAGSGLIHDNVSDRTNINS---VYLKDKIP-SFIQHQGTVG 453
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLI+LSSSNCFR+ P
Sbjct: 454 TLLNRNKECQSLILLSSSNCFRIGP 478
>A1XK29_ACOGR (tr|A1XK29) RNA polymerase beta chain (Fragment) OS=Acorus
gramineus GN=rpoC2 PE=4 SV=1
Length = 838
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS I Y + KR D +GSG I +N SDRTNINP +Y K +I S Q+QGT+
Sbjct: 399 IRIELCKSAILY-TGKRKDIAGSGLIHDNVSDRTNINP---VYLKDKIP-SFTQHQGTVG 453
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLI+LSSSNC R+ P
Sbjct: 454 TLLNRNKECQSLILLSSSNCSRIGP 478
>A1XKF7_9MAGN (tr|A1XKF7) RNA polymerase beta chain (Fragment) OS=Laurus nobilis
GN=rpoC2 PE=4 SV=1
Length = 760
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS I YI KRND + SG I+NN SDRTNINPFY K RIQ S Q+QGTI
Sbjct: 373 IRIDLVKSSIFYIG-KRNDMANSGLIANNGSDRTNINPFY---FKVRIQ-SFTQHQGTIR 427
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKEC S +IL SS+C R+
Sbjct: 428 TLLNRNKECPSFLILLSSDCSRI 450
>B7T3M4_9ROSI (tr|B7T3M4) DNA-directed RNA polymerase OS=Geranium palmatum
GN=rpoC2 PE=3 SV=1
Length = 1417
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 67/92 (72%), Gaps = 10/92 (10%)
Query: 1 LRINLAKSH--ISYISRKRNDPSGSGPISNNESDRTNINPF---YPIYSKTR--IQQSLK 53
L+INL KS ISYI RKR+DP+G +S+N + TNINPF Y IYSK + ++Q L
Sbjct: 887 LKINLGKSQSQISYI-RKRDDPAGL--LSDNGPNCTNINPFSSSYSIYSKPKASLRQPLS 943
Query: 54 QNQGTISTLLNRNKECQSLIILSSSNCFRMDP 85
QNQG+I TL NRNKEC S IILSSSNCF++ P
Sbjct: 944 QNQGSIRTLWNRNKECHSFIILSSSNCFQLGP 975
>A1XKF4_9MAGN (tr|A1XKF4) RNA polymerase beta chain (Fragment) OS=Peumus boldus
GN=rpoC2 PE=4 SV=1
Length = 758
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS I YI KRND + SG I NN SDRTNINPFY K R+ SL Q+QGTI
Sbjct: 371 IRIDLVKSPIFYIG-KRNDTASSGLIPNNGSDRTNINPFY---FKARLP-SLTQHQGTIR 425
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC S +ILSS +C R+ P
Sbjct: 426 TLLNRNKECPSFLILSSYDCSRIGP 450
>A1XK78_SPAAM (tr|A1XK78) RNA polymerase beta chain (Fragment) OS=Sparganium
americanum GN=rpoC2 PE=4 SV=1
Length = 834
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + SG I +N DR NINPFY SK +I+ SL Q+QGT+
Sbjct: 395 IRIELVKSAISY-TGKRYDRASSGLIPDNGLDRNNINPFY---SKAKIK-SLSQHQGTVG 449
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR KECQSL+ILSSSNC R+ P
Sbjct: 450 TLLNRTKECQSLLILSSSNCSRIGP 474
>A1XKE4_SANCA (tr|A1XKE4) RNA polymerase beta chain (Fragment) OS=Sanguinaria
canadensis GN=rpoC2 PE=4 SV=1
Length = 853
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 67/87 (77%), Gaps = 6/87 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGP--ISNNESDRTNINPFYPIYSKTRIQQSLKQNQGT 58
+R++L KS ISY + KRNDP GSG I N SDRTN+NPFY SK R+QQS Q+QGT
Sbjct: 419 IRMDLVKSPISY-TGKRNDPGGSGLRLIPANGSDRTNLNPFY---SKARLQQSFTQHQGT 474
Query: 59 ISTLLNRNKECQSLIILSSSNCFRMDP 85
I TLLNRNKE QSLIILSSSNCFRM P
Sbjct: 475 IRTLLNRNKESQSLIILSSSNCFRMGP 501
>A1XKF6_9MAGN (tr|A1XKF6) RNA polymerase beta chain (Fragment) OS=Gyrocarpus
americanus GN=rpoC2 PE=4 SV=1
Length = 712
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS + YI KRND + SG I+NN SDRTNIN FY K RIQ SL Q+QGTI
Sbjct: 324 IRIDLVKSPMLYIG-KRNDTASSGLIANNGSDRTNINSFY---FKARIQ-SLTQHQGTIR 378
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKEC S +ILSSS+C R+
Sbjct: 379 TLLNRNKECSSFLILSSSDCSRI 401
>A1XK56_OROAQ (tr|A1XK56) RNA polymerase beta chain (Fragment) OS=Orontium
aquaticum GN=rpoC2 PE=4 SV=1
Length = 835
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI LAKS ISY + KRN +GSG I++N D TNINPFY SK +IQ + +G +
Sbjct: 399 IRIELAKSPISY-TGKRNYMAGSGLITHNGLDYTNINPFY---SKAKIQSLAQHKKGIVG 454
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSLIILSS NC R P
Sbjct: 455 TLLNRNKECQSLIILSSYNCSRSGP 479
>A1XK71_9LILI (tr|A1XK71) RNA polymerase beta chain (Fragment) OS=Carludovica
palmata GN=rpoC2 PE=4 SV=1
Length = 844
Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D SGSG I N D TNINPFY SK++IQ SL Q+QGTIS
Sbjct: 403 IRIELVKSTISY-TGKRKDISGSGLIPANGLDHTNINPFY---SKSKIQ-SLTQHQGTIS 457
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQSL ILSSSNC ++ P
Sbjct: 458 IGTLLNRNKECQSLRILSSSNCSQIGP 484
>A1XKE8_9MAGN (tr|A1XKE8) RNA polymerase beta chain (Fragment) OS=Cinnamodendron
ekmanii GN=rpoC2 PE=4 SV=1
Length = 745
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS SY + KRND +GSG ISNN SD TN+N Y SK RIQ SL Q+QGTI
Sbjct: 363 IRIDLVKSPTSY-TGKRNDMAGSGLISNNGSDHTNMNSSY---SKARIQ-SLTQHQGTIR 417
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
TL+NRNKE QS +ILSSSNC R+ P
Sbjct: 418 TLMNRNKEYQSFLILSSSNCSRIGPL 443
>B7T2U1_9ROSI (tr|B7T2U1) DNA-directed RNA polymerase OS=Erodium chrysanthum
GN=rpoC2 PE=3 SV=1
Length = 1395
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 4/88 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPF---YPIYSKTRIQQSLKQNQG 57
L+I+L KS S I RKR DPSGS S DR NINPF Y + S+ R++Q+L +NQG
Sbjct: 888 LKIHLGKSPSSSI-RKREDPSGSVLSSEKGPDRPNINPFSSSYSMDSQARVRQALSENQG 946
Query: 58 TISTLLNRNKECQSLIILSSSNCFRMDP 85
T+ TLLNR KE QS +ILSSSNCF++ P
Sbjct: 947 TVRTLLNRRKESQSFLILSSSNCFQLGP 974
>Q4FFY6_TYPLA (tr|Q4FFY6) DNA-directed RNA polymerase (Fragment) OS=Typha
latifolia GN=rpoC2 PE=3 SV=1
Length = 1387
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISY + KR D + SG I +N DRTN NPFY SK +IQ SL Q++GT+
Sbjct: 868 IRIDLVKSTISY-TGKRYDRASSGLIPDNGLDRTNTNPFY---SKVKIQ-SLSQHRGTVG 922
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR KEC+SL+ILSSSNC R+ P
Sbjct: 923 TLLNRTKECRSLLILSSSNCSRIGP 947
>D3JJ78_TYPLA (tr|D3JJ78) DNA-directed RNA polymerase OS=Typha latifolia GN=rpoC2
PE=3 SV=1
Length = 1383
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISY + KR D + SG I +N DRTN NPFY SK +IQ SL Q++GT+
Sbjct: 864 IRIDLVKSTISY-TGKRYDRASSGLIPDNGLDRTNTNPFY---SKVKIQ-SLSQHRGTVG 918
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNR KEC+SL+ILSSSNC R+ P
Sbjct: 919 TLLNRTKECRSLLILSSSNCSRIGP 943
>A1XKA0_CANWI (tr|A1XKA0) RNA polymerase beta chain (Fragment) OS=Canella
winterana GN=rpoC2 PE=4 SV=1
Length = 762
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 63/86 (73%), Gaps = 5/86 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS SY +RKRND +GSG I NN SD TN+N Y SK RIQ SL Q+QGTI
Sbjct: 389 IRIDLVKSPTSY-TRKRNDMAGSGLIPNNGSDHTNMNSSY---SKARIQ-SLTQHQGTIR 443
Query: 61 TLLNRNKECQSLIILSSSNCFRMDPC 86
TL+N+NKE QS +ILSSSNC R+ P
Sbjct: 444 TLMNKNKEYQSFLILSSSNCSRIGPL 469
>B7T382_9ROSI (tr|B7T382) DNA-directed RNA polymerase OS=Geranium carolinianum
GN=rpoC2 PE=3 SV=1
Length = 1420
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 65/92 (70%), Gaps = 12/92 (13%)
Query: 1 LRINLAKSH--ISYISRKRNDPSGSGPISNNESDRTNINPF---YPIYSKTR--IQQSLK 53
L++NL KS ISYI RKR+DPS S +N + TNINPF Y IYSK + ++Q L
Sbjct: 891 LKMNLGKSQSQISYI-RKRDDPSSS----DNGPNCTNINPFSSNYSIYSKPKASVRQPLS 945
Query: 54 QNQGTISTLLNRNKECQSLIILSSSNCFRMDP 85
QNQGTI TL NRNKEC S IILSSSNCF++ P
Sbjct: 946 QNQGTIRTLWNRNKECHSFIILSSSNCFQLGP 977
>A1XK83_9ASPA (tr|A1XK83) RNA polymerase beta chain (Fragment) OS=Iris sp. Qiu
95091 GN=rpoC2 PE=4 SV=1
Length = 819
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 61/83 (73%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS SY + KR D +GSG I +N DRTNINPF+ SK +IQ S Q+QGTI
Sbjct: 380 IRIELVKSTTSY-TGKRYDTAGSGLIPDNRLDRTNINPFF---SKAKIQ-SFTQHQGTIG 434
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLN+NKEC+SLIILSS NC R+
Sbjct: 435 TLLNQNKECKSLIILSSFNCSRV 457
>A1XKE7_9MAGN (tr|A1XKE7) RNA polymerase beta chain (Fragment) OS=Thottea
borneensis GN=rpoC2 PE=4 SV=1
Length = 752
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 64/85 (75%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS +SY + KRND +GSG +N SDRT+IN F P K +IQ +L Q+QGT+
Sbjct: 367 IRIDLVKSPLSY-TGKRNDTAGSGFNHDNGSDRTHINLFSP---KEKIQ-ALAQHQGTLR 421
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLN+NK+CQS +ILSSSNCFR+ P
Sbjct: 422 MLLNKNKQCQSFLILSSSNCFRIGP 446
>A1XK50_EUCUL (tr|A1XK50) RNA polymerase beta chain (Fragment) OS=Eucommia
ulmoides GN=rpoC2 PE=4 SV=1
Length = 812
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 58/85 (68%), Gaps = 9/85 (10%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
L I+L K SYI KRN PS G IS+NESD TN S+ R+QQ L QN+GTI
Sbjct: 380 LIIDLVKLPSSYIG-KRNGPSSFGLISDNESDHTN--------SRARLQQPLNQNEGTIH 430
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LN+NKECQSLIILSSSNC RM P
Sbjct: 431 TWLNKNKECQSLIILSSSNCSRMGP 455
>A1XKC2_9MAGN (tr|A1XKC2) RNA polymerase beta chain (Fragment) OS=Austrobaileya
scandens GN=rpoC2 PE=4 SV=1
Length = 835
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISY + KRND +GSG N SDRTNINPF SK RIQ L Q+QGT+
Sbjct: 398 IRIDLVKSPISY-TGKRNDTAGSGLNPVNRSDRTNINPFC---SKERIQL-LSQHQGTVR 452
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN NKE +S ++LSSSNCFR+ P
Sbjct: 453 TLLNSNKEGESFLVLSSSNCFRIGP 477
>A1XK96_BEARE (tr|A1XK96) RNA polymerase beta chain (Fragment) OS=Beaucarnea
recurvata GN=rpoC2 PE=4 SV=1
Length = 830
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D +GSG I +N DRTNINPFY SK +I K +QGTI
Sbjct: 398 IRIELVKSTISY-TGKRYDTAGSGLIPDNGLDRTNINPFY---SKVKIPLVTK-HQGTIG 452
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKE QSL ILSS NCFR+ P
Sbjct: 453 TLLNRNKEGQSLRILSSFNCFRVVP 477
>A1XK75_9LILI (tr|A1XK75) RNA polymerase beta chain (Fragment) OS=Chamaedorea
tenella GN=rpoC2 PE=4 SV=1
Length = 847
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 63/87 (72%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + S IS+NE DRTNINPFY SK +IQ SL Q+Q TI
Sbjct: 409 IRIELVKSTISY-TGKRYDRASSVLISDNELDRTNINPFY---SKAKIQ-SLTQHQVTIG 463
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN ECQSLIILSSSNC R+ P
Sbjct: 464 IGTLLNRNNECQSLIILSSSNCSRIRP 490
>A1XKB6_9LILI (tr|A1XKB6) RNA polymerase beta chain (Fragment) OS=Philydrum
lanuginosum GN=rpoC2 PE=4 SV=1
Length = 772
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 7/85 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D + SG I NN DRTNINPFY SK +I+ SL Q QGTI
Sbjct: 371 IRIELVKSTISY-TGKRYDRTSSGLIPNNGLDRTNINPFY---SKVKIK-SLTQQQGTIG 425
Query: 61 --TLLNRNKECQSLIILSSSNCFRM 83
TLLN+NKECQSLIILSSSNC R+
Sbjct: 426 IGTLLNQNKECQSLIILSSSNCSRI 450
>A9XW48_BATMA (tr|A9XW48) DNA-directed RNA polymerase (Fragment) OS=Batis
maritima GN=rpoC2 PE=3 SV=1
Length = 1256
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KSH+SYI RKRN S SG IS+NESD+ INPF +YSK IQQSL +N GTI
Sbjct: 829 LRIDLVKSHMSYI-RKRNHLSYSGFISDNESDQ--INPFDFLYSKGGIQQSLSKNHGTIR 885
Query: 61 TLLN-RNKECQSLIILSSSNCFRMDP 85
LLN +NKE QSL+ILSSSNCFRMDP
Sbjct: 886 MLLNKKNKESQSLLILSSSNCFRMDP 911
>A9QBC9_ELAOL (tr|A9QBC9) DNA-directed RNA polymerase (Fragment) OS=Elaeis
oleifera GN=rpoC2 PE=3 SV=1
Length = 1375
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 62/87 (71%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L S ISY + KR D + S IS+N DRTNINPFY SK +IQ SL Q+QGTI
Sbjct: 867 IRIELVNSTISY-TGKRYDRASSVLISDNRLDRTNINPFY---SKAKIQ-SLTQHQGTIG 921
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN ECQSLIILSSSNC R+ P
Sbjct: 922 IGTLLNRNNECQSLIILSSSNCSRIGP 948
>A1XK72_ASPOF (tr|A1XK72) RNA polymerase beta chain (Fragment) OS=Asparagus
officinalis GN=rpoC2 PE=4 SV=1
Length = 860
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L K ISY + +GSG I N RTNINPFYP KTRI + Q+QGTI
Sbjct: 421 IRIELVKCTISYTGNWYHT-AGSGLIPTNGLGRTNINPFYP---KTRIPL-VTQHQGTIG 475
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS++ILSS NCFR+ P
Sbjct: 476 TLLNRNKECQSMLILSSFNCFRVGP 500
>A1XKC4_ILLFL (tr|A1XKC4) RNA polymerase beta chain (Fragment) OS=Illicium
floridanum GN=rpoC2 PE=4 SV=1
Length = 754
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 8/85 (9%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS IS KRND +GSG I N SDRTNINPF SK RIQ SL Q+QGT+
Sbjct: 352 IRIDLVKSPIS----KRNDTAGSGLIPVNGSDRTNINPFC---SKARIQ-SLSQHQGTVR 403
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKE +S ++LSSSNC R+ P
Sbjct: 404 TFLNRNKEGESFLVLSSSNCSRIGP 428
>A1XKC0_9MAGN (tr|A1XKC0) RNA polymerase beta chain (Fragment) OS=Kadsura
japonica GN=rpoC2 PE=4 SV=1
Length = 787
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+R++L KS ISY + KRND +GSG I N SDR NINPF SK RIQ SL Q+QGT+
Sbjct: 376 IRMDLVKSPISY-TGKRNDTTGSGLIPVNGSDRPNINPFC---SKARIQ-SLSQHQGTVR 430
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
T LNRNKE +S ++LSSSNC R+ P
Sbjct: 431 TFLNRNKEGESFLVLSSSNCSRIGP 455
>A1XKC8_9MAGN (tr|A1XKC8) RNA polymerase beta chain (Fragment) OS=Ascarina sp.
Thien 500 GN=rpoC2 PE=4 SV=1
Length = 804
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS ISY + KRND + S I +N SD TNI PF SK R+Q S Q+QGTI
Sbjct: 398 IRIDLVKSPISY-TGKRNDTTSSELIPDNASDCTNITPFD---SKARVQ-SFTQHQGTIR 452
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC+SLIILSSSNC R+ P
Sbjct: 453 TLLNRNKECKSLIILSSSNCSRIGP 477
>A1XKC3_9LILI (tr|A1XKC3) RNA polymerase beta chain (Fragment) OS=Pleea
tenuifolia GN=rpoC2 PE=4 SV=1
Length = 821
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR+D +GSG I +N D TNINPFY SK +I+ SL Q++GTI
Sbjct: 381 IRIELVKSPISY-TGKRSDMAGSGLIPHNGLDCTNINPFY---SKAKIK-SLTQHKGTIG 435
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKECQS +ILSSSNC R+ P
Sbjct: 436 IGTLLNRNKECQSFLILSSSNCSRIGP 462
>D3J6H6_9POAL (tr|D3J6H6) DNA-directed RNA polymerase (Fragment) OS=Pharus
latifolius GN=rpoC2 PE=3 SV=1
Length = 1455
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 59/83 (71%), Gaps = 5/83 (6%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI L KS ISY +R R D SGPISNN D TN N FY SK +IQ SL Q+QG I
Sbjct: 983 LRIELVKSTISYTAR-RYDRISSGPISNNRLDCTNTNSFY---SKAKIQ-SLSQHQGAIG 1037
Query: 61 TLLNRNKECQSLIILSSSNCFRM 83
TLLNRNKE QSL+ILS+SNC R+
Sbjct: 1038 TLLNRNKEYQSLMILSASNCSRI 1060
>A1XK70_9LILI (tr|A1XK70) RNA polymerase beta chain (Fragment) OS=Croomia
pauciflora GN=rpoC2 PE=4 SV=1
Length = 849
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 7/87 (8%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI L KS ISY + KR D SGS I +N + TNINPFY SK++IQ SL Q+QGTI
Sbjct: 408 IRIELVKSTISY-TGKRKDTSGSELIPDNGLNHTNINPFY---SKSKIQ-SLTQHQGTIG 462
Query: 61 --TLLNRNKECQSLIILSSSNCFRMDP 85
TLLN+NKECQSLIILSSSNC ++ P
Sbjct: 463 IGTLLNQNKECQSLIILSSSNCSQIGP 489
>A6YAL0_KALDA (tr|A6YAL0) RNA polymerase beta' subunit (Fragment) OS=Kalanchoe
daigremontiana GN=rpoC2 PE=4 SV=1
Length = 815
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L S +SY + KRND SGS I N S RT INPFY SKT IQQ L QNQ TI
Sbjct: 392 IRIDLVNSPLSY-TGKRNDSSGSWLIYNTGSSRTYINPFY---SKTWIQQPLIQNQVTIR 447
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRN + QSL ILSSSNC R+ P
Sbjct: 448 TLLNRNNDYQSLRILSSSNCSRLGP 472
>A9XWB1_9ROSI (tr|A9XWB1) DNA-directed RNA polymerase (Fragment) OS=Reseda lutea
GN=rpoC2 PE=3 SV=1
Length = 1008
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 63/85 (74%), Gaps = 2/85 (2%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
LRI+L KS IS RKRN+PS S IS N SDR INPFY IY+K RIQQS N GTI
Sbjct: 838 LRIDLVKSPISSYIRKRNNPSDSNFISANGSDR--INPFYSIYAKDRIQQSRSSNYGTIR 895
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
LLNRNKE QSL+ILSSS+CFRM P
Sbjct: 896 ALLNRNKESQSLLILSSSSCFRMGP 920
>A1XKB1_9MAGN (tr|A1XKB1) RNA polymerase beta chain (Fragment) OS=Daphnandra
micrantha GN=rpoC2 PE=4 SV=1
Length = 824
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 1 LRINLAKSHISYISRKRNDPSGSGPISNNESDRTNINPFYPIYSKTRIQQSLKQNQGTIS 60
+RI+L KS I I KRND + SG I N SD TNINPFY K RIQ SL Q+QGTI
Sbjct: 393 IRIDLVKSPILCIG-KRNDMASSGLIPNKGSDHTNINPFY---FKARIQ-SLTQHQGTIR 447
Query: 61 TLLNRNKECQSLIILSSSNCFRMDP 85
TLLNRNKEC S +ILSSS+C ++ P
Sbjct: 448 TLLNRNKECPSFLILSSSDCSQIGP 472