Jatropha Genome Database

JcCB0122531.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0122531.20 - phase: 1 /partial
         (136 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SHT8_RICCO (tr|B9SHT8) Putative uncharacterized protein OS=Ric...   133   6e-30
B9SB48_RICCO (tr|B9SB48) Putative uncharacterized protein OS=Ric...    75   2e-12
B9GEN3_POPTR (tr|B9GEN3) Predicted protein OS=Populus trichocarp...    70   6e-11
B7FLZ3_MEDTR (tr|B7FLZ3) Putative uncharacterized protein OS=Med...    69   2e-10
B9HPT6_POPTR (tr|B9HPT6) Predicted protein OS=Populus trichocarp...    60   1e-07
D7M4G1_ARALY (tr|D7M4G1) Putative uncharacterized protein OS=Ara...    55   2e-06

>B9SHT8_RICCO (tr|B9SHT8) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0621450 PE=4 SV=1
          Length = 626

 Score =  133 bits (335), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 67/102 (65%), Positives = 71/102 (69%), Gaps = 2/102 (1%)

Query: 36  AHVDWNTG-VMPEFDYNSIDWTLDNNMXXXXXXXXXXXXXXXXXXXXXTRMNSMNSSCIS 94
           +HVDWN G  MPEFDY SIDWTLD N+                      RMNSMNSSCIS
Sbjct: 526 SHVDWNNGGSMPEFDYTSIDWTLDTNLSSSKRGLWLGLSSLLSDRSG-ARMNSMNSSCIS 584

Query: 95  GLRDAGATKETSSSAGLHEWTSPFAGKDIFSLPRQFVTSPSP 136
           GLR+AGA KE +SS GL EWTSPFAGKDIFSLPRQFVTSPSP
Sbjct: 585 GLREAGAAKEMASSVGLREWTSPFAGKDIFSLPRQFVTSPSP 626


>B9SB48_RICCO (tr|B9SB48) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0784680 PE=4 SV=1
          Length = 663

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 53/113 (46%), Gaps = 15/113 (13%)

Query: 38  VDWNT-GVMPEFDYNSIDWTLDNNMX--------------XXXXXXXXXXXXXXXXXXXX 82
           VDW+T G M + DY SIDW+LD  +                                   
Sbjct: 550 VDWSTAGSMAQLDYTSIDWSLDRGLSSPSHNGLWLGSGSLKNNTQMYDSSTSALGAKLTM 609

Query: 83  TRMNSMNSSCISGLRDAGATKETSSSAGLHEWTSPFAGKDIFSLPRQFVTSPS 135
               S N   I GL+D G     +S+ G HEWTSPF GKD+FSLPRQFV+SPS
Sbjct: 610 RTAASGNGVRIPGLQDNGVANAETSATGSHEWTSPFEGKDLFSLPRQFVSSPS 662


>B9GEN3_POPTR (tr|B9GEN3) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_797479 PE=4 SV=1
          Length = 652

 Score = 70.5 bits (171), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 15/113 (13%)

Query: 38  VDWNT-GVMPEFDYNSIDWTLDNNMXXX---------XXXXXXXXXXXXXXXXXXTRMN- 86
           VDW+T G M + DY SIDW+L+  +                               R+  
Sbjct: 539 VDWSTSGSMEQLDYTSIDWSLNRGLSSPRPGGLWLGPSLKSSAQAYVSTGASGFGARLAM 598

Query: 87  ----SMNSSCISGLRDAGATKETSSSAGLHEWTSPFAGKDIFSLPRQFVTSPS 135
               S N   I GLRD G     +S++G HEWTSPF G DIF L RQFV+SPS
Sbjct: 599 RAAPSSNGIPIPGLRDGGVANSETSTSGSHEWTSPFEGNDIFGLSRQFVSSPS 651


>B7FLZ3_MEDTR (tr|B7FLZ3) Putative uncharacterized protein OS=Medicago truncatula
           PE=2 SV=1
          Length = 228

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 38/49 (77%)

Query: 86  NSMNSSCISGLRDAGATKETSSSAGLHEWTSPFAGKDIFSLPRQFVTSP 134
           N M SS ++G R+ G  +E SSSAGL +WTSPFAGKDIFS PR+FVT P
Sbjct: 178 NRMASSYMTGSRNVGTAREISSSAGLRDWTSPFAGKDIFSAPRKFVTFP 226


>B9HPT6_POPTR (tr|B9HPT6) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_768291 PE=4 SV=1
          Length = 656

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 51/122 (41%), Gaps = 24/122 (19%)

Query: 38  VDWNT-GVMPEFDYNSIDWTLDNNM------------------XXXXXXXXXXXXXXXXX 78
           VDW+T G M + DY SIDW+LD  +                                   
Sbjct: 534 VDWSTSGSMAQLDYTSIDWSLDRGLSSPRPGGFWLGPTNLKSSAQTYDSSSAQMYDSSSA 593

Query: 79  XXXXTRMN-----SMNSSCISGLRDAGATKETSSSAGLHEWTSPFAGKDIFSLPRQFVTS 133
                R+      S N   + GL+D G     +S+ G  EWTSPF G D+F L RQFV+S
Sbjct: 594 SGFGARLAMRSAPSGNGIPVPGLQDGGVANSETSTPGSVEWTSPFEGNDLFGLSRQFVSS 653

Query: 134 PS 135
           PS
Sbjct: 654 PS 655


>D7M4G1_ARALY (tr|D7M4G1) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_488055 PE=4 SV=1
          Length = 611

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 3/95 (3%)

Query: 38  VDWNT-GVMPEFDYNSIDWTLDNNMXXXXXXXXXXXXXXXXXXXXXTRMNSMNSSCISGL 96
           +DWN  G +   DYN+IDW+LD  +                      R  ++ +   +G+
Sbjct: 515 LDWNADGSLGHLDYNNIDWSLDKGLACPRPSQQYVAASSPYEAHMNGRTRTLANG--NGM 572

Query: 97  RDAGATKETSSSAGLHEWTSPFAGKDIFSLPRQFV 131
             A   +E +      EWTSPF GKD+FSL RQ+V
Sbjct: 573 GMAMGVQEAALVGNGREWTSPFEGKDLFSLSRQYV 607