Jatropha Genome Database

JcCB0115461.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0115461.20 + phase: 0 /partial
         (92 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S3T9_RICCO (tr|B9S3T9) Putative uncharacterized protein OS=Ric...    78   4e-13
A5C0G0_VITVI (tr|A5C0G0) Putative uncharacterized protein OS=Vit...    75   2e-12
B9HKP1_POPTR (tr|B9HKP1) Predicted protein OS=Populus trichocarp...    74   5e-12
A5ALI2_VITVI (tr|A5ALI2) Putative uncharacterized protein OS=Vit...    74   6e-12
B9SMJ0_RICCO (tr|B9SMJ0) Putative uncharacterized protein OS=Ric...    71   4e-11
B9T3N5_RICCO (tr|B9T3N5) Putative uncharacterized protein OS=Ric...    67   7e-10
B9SR74_RICCO (tr|B9SR74) Putative uncharacterized protein OS=Ric...    65   2e-09
A5C487_VITVI (tr|A5C487) Putative uncharacterized protein OS=Vit...    64   5e-09
B9T497_RICCO (tr|B9T497) Putative uncharacterized protein OS=Ric...    62   2e-08
B9S3K6_RICCO (tr|B9S3K6) Putative uncharacterized protein OS=Ric...    54   8e-06

>B9S3T9_RICCO (tr|B9S3T9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0555300 PE=4 SV=1
          Length = 250

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 53/79 (67%)

Query: 12  YVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFR 71
           Y+FQFFHEVDV RV    P TF+N  +LL RL       +V L +   W+QV  L  GFR
Sbjct: 84  YLFQFFHEVDVKRVENGGPWTFNNYHILLHRLKEKENPHEVELKWTDFWIQVYRLPIGFR 143

Query: 72  SERVLKDMGDRIGQFMEAD 90
           SE+V+K++G+ +G+++E+D
Sbjct: 144 SEKVVKNIGNYVGEYLESD 162


>A5C0G0_VITVI (tr|A5C0G0) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_016971 PE=4 SV=1
          Length = 652

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 4/92 (4%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERL--GSYPTSLDVPLFFVP 58
           G+ I+EIN  +++FQFFH VD+ RVL   P TFDN LL+L  L  G+ PT+  +PLF V 
Sbjct: 14  GICIKEINKQLFLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTA--IPLFHVL 71

Query: 59  LWVQVKGLRSGFRSERVLKDMGDRIGQFMEAD 90
            W+QV  +  G  S  V K +G+ IG+F++ D
Sbjct: 72  FWIQVYDIPVGSMSLNVGKQLGNFIGKFVDYD 103


>B9HKP1_POPTR (tr|B9HKP1) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_563569 PE=4 SV=1
          Length = 280

 Score = 73.9 bits (180), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 53/91 (58%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           GM  RE++   Y+ QFFH VD+ RVL   P  FDN LLLL RL        +P+  V  W
Sbjct: 53  GMCTRELSDSKYLIQFFHSVDMKRVLEGAPWAFDNHLLLLHRLVEGDVPRQIPVNHVDFW 112

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFMEADS 91
           VQ+  L+ G+ S  + K +GD IG F++ D+
Sbjct: 113 VQIYELQVGYMSLVIGKQLGDFIGTFVDYDT 143


>A5ALI2_VITVI (tr|A5ALI2) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_011331 PE=4 SV=1
          Length = 626

 Score = 73.6 bits (179), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 4/90 (4%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERL--GSYPTSLDVPLFFVP 58
           G+ I+EIN  ++ FQFFH VD+ RVL   P TFDN LL+L  L  G+ PT+  +PLF V 
Sbjct: 64  GICIKEINKQLFXFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTA--IPLFHVL 121

Query: 59  LWVQVKGLRSGFRSERVLKDMGDRIGQFME 88
            W+QV  +  G  S  V K + + IG+F++
Sbjct: 122 FWIQVYDILVGSMSLNVGKQLDNFIGKFVD 151


>B9SMJ0_RICCO (tr|B9SMJ0) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0988460 PE=4 SV=1
          Length = 103

 Score = 70.9 bits (172), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 55/88 (62%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           GM +REI   +++FQFFH +D+ R++   P TFDN +L+L  L     S ++ LF++ +W
Sbjct: 14  GMCVREIPDQLFLFQFFHPLDLKRIMEGGPWTFDNHMLILHHLQQGEISSNILLFYIAVW 73

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFME 88
           VQ+  L  G  S+ V + + + IG FME
Sbjct: 74  VQIHELPIGCMSKAVGRQLSNFIGTFME 101


>B9T3N5_RICCO (tr|B9T3N5) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1166040 PE=4 SV=1
          Length = 348

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/78 (41%), Positives = 51/78 (65%)

Query: 12  YVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFR 71
           Y+F+FFHEVDV RV    P TF+N  +LL RL  +    DV + +V  W+Q   +  GFR
Sbjct: 37  YLFRFFHEVDVKRVEDGGPWTFNNYHILLHRLVEHEDPQDVDINWVDFWIQAYRVPIGFR 96

Query: 72  SERVLKDMGDRIGQFMEA 89
           SE+V +++G+ I +++++
Sbjct: 97  SEKVARNIGNYIEKYVDS 114


>B9SR74_RICCO (tr|B9SR74) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1182910 PE=4 SV=1
          Length = 198

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 53/90 (58%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           G+ I+E+   +++FQFFHE+++  ++   P TF+ Q+LL ++L        V LF   +W
Sbjct: 72  GVCIKELEPSLFLFQFFHELEMKHMIEASPWTFEQQVLLFKKLEMNEQPTRVLLFHFSMW 131

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFMEAD 90
           +QV  L  GF SERV   +G+ +  F E +
Sbjct: 132 IQVHDLPIGFMSERVAMHIGNYVRTFEEVN 161


>A5C487_VITVI (tr|A5C487) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_000452 PE=4 SV=1
          Length = 344

 Score = 64.3 bits (155), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 53/90 (58%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           G+ I++I    ++FQF HE D+ R+    P  +DN  L+ ER+        V L  + +W
Sbjct: 78  GISIQDIYPQRFLFQFGHEADIRRIQESGPWAYDNHPLIFERVAQGDNLDKVDLNELAMW 137

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFMEAD 90
           +Q+  L +G+ S+ + + +G R+G+F+E+D
Sbjct: 138 IQLHDLPAGWWSDSIARKIGSRLGEFLESD 167


>B9T497_RICCO (tr|B9T497) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0176260 PE=4 SV=1
          Length = 403

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/79 (40%), Positives = 46/79 (58%)

Query: 12  YVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLWVQVKGLRSGFR 71
           Y+FQFFH VDV R+    P TF+N  +LL RL        V L +    +QV  L  GF 
Sbjct: 90  YLFQFFHGVDVKRIENGGPWTFNNYHILLHRLKEKENPHKVELKWTNFLIQVYHLPIGFW 149

Query: 72  SERVLKDMGDRIGQFMEAD 90
            E+V K +G+ +G+++E+D
Sbjct: 150 REKVAKSIGNYVGEYLESD 168


>B9S3K6_RICCO (tr|B9S3K6) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0671040 PE=4 SV=1
          Length = 167

 Score = 53.5 bits (127), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 50/88 (56%)

Query: 1   GMQIREINGGVYVFQFFHEVDVHRVLLMCPCTFDNQLLLLERLGSYPTSLDVPLFFVPLW 60
           G+ I+EI   +Y+FQFF+ +D  RV+   P +FDN LL+ ++L        + L F+ +W
Sbjct: 62  GICIKEIAVNLYLFQFFYILDSKRVIDGGPWSFDNHLLVYDQLLLGEILAQMKLNFLDMW 121

Query: 61  VQVKGLRSGFRSERVLKDMGDRIGQFME 88
           V V  L  GF S  V K +   + +F++
Sbjct: 122 VHVYELPVGFMSVMVSKQLNKFVEEFLD 149