Jatropha Genome Database
- JcCB0112461.20
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0112461.20 - phase: 1 /partial
(150 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9RZD4_RICCO (tr|B9RZD4) NAD dependent epimerase/dehydratase, pu... 96 1e-18
B9HRS5_POPTR (tr|B9HRS5) Predicted protein OS=Populus trichocarp... 85 2e-15
D7TPX1_VITVI (tr|D7TPX1) Whole genome shotgun sequence of line P... 71 4e-11
B9H0M0_POPTR (tr|B9H0M0) Predicted protein OS=Populus trichocarp... 69 2e-10
A5AHG0_VITVI (tr|A5AHG0) Putative uncharacterized protein OS=Vit... 62 2e-08
Q8H0U5_ARATH (tr|Q8H0U5) At3g18890 OS=Arabidopsis thaliana GN=At... 56 1e-06
Q9LHN0_ARATH (tr|Q9LHN0) Gb|AAC26697.1 OS=Arabidopsis thaliana P... 56 1e-06
A8IXN4_BRACM (tr|A8IXN4) Catalytic/coenzyme binding protein OS=B... 56 1e-06
D7L962_ARALY (tr|D7L962) Catalytic/ coenzyme binding protein OS=... 55 3e-06
>B9RZD4_RICCO (tr|B9RZD4) NAD dependent epimerase/dehydratase, putative
OS=Ricinus communis GN=RCOM_0938320 PE=4 SV=1
Length = 584
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 56/68 (82%)
Query: 72 SPYAIYDDLKPPTSPIPAAPLVSIPTSSENGGPKAGNSAPPTAPEDMQQHTEAKPKPLSP 131
SP+ +YDDLKPPTSP P AP+ S+P SS N PKAGNSAPPTAP + QQ+ E KP+PLSP
Sbjct: 507 SPFLVYDDLKPPTSPSPIAPVGSVPPSSTNEVPKAGNSAPPTAPVEKQQNAEPKPRPLSP 566
Query: 132 FSMYEDMK 139
++MYEDMK
Sbjct: 567 YTMYEDMK 574
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 37/48 (77%)
Query: 43 DEGSKVGNSAPILAPEEEQQHTEAKPRPLSPYAIYDDLKPPTSPIPAA 90
+E K GNSAP AP E+QQ+ E KPRPLSPY +Y+D+KPPTSP PA
Sbjct: 536 NEVPKAGNSAPPTAPVEKQQNAEPKPRPLSPYTMYEDMKPPTSPSPAG 583
>B9HRS5_POPTR (tr|B9HRS5) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_557298 PE=4 SV=1
Length = 564
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 47 KVGNSAPILAPEEEQQHTEAKPRPLSPYAIYDDLKPPTSPIPAAPL-VSIPTSSENGGPK 105
K GNSAP A + Q H E PRPLSPY IYDDLKPPTSP P AP+ + TSS N K
Sbjct: 460 KTGNSAPPTAAIDNQHHEEPNPRPLSPYPIYDDLKPPTSPSPTAPVGLVATTSSINAVSK 519
Query: 106 AGNSAPPTAPEDMQQHTEAKPKPLSPFSMYEDMK 139
GN+APPTA D Q H E P+PLSP+ MYED+K
Sbjct: 520 TGNNAPPTAAIDNQHHKEPNPRPLSPYPMYEDLK 553
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 69 RPLSPYAIYDDLKPPTSPIPAAPLVSIPTSSENGGPKAGNSAPPTAPEDMQQHTEAKPKP 128
RPLSPY YDDLKPPTSP P A V + + PK GNSAPPTA D Q H E P+P
Sbjct: 425 RPLSPYVAYDDLKPPTSPSPTA-PVGLVAITAPAVPKTGNSAPPTAAIDNQHHEEPNPRP 483
Query: 129 LSPFSMYEDMK 139
LSP+ +Y+D+K
Sbjct: 484 LSPYPIYDDLK 494
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 46 SKVGNSAPILAPEEEQQHTEAKPRPLSPYAIYDDLKPPTSPIPAAPL 92
SK GN+AP A + Q H E PRPLSPY +Y+DLKPP SP P+ L
Sbjct: 518 SKTGNNAPPTAAIDNQHHKEPNPRPLSPYPMYEDLKPPASPTPSLKL 564
>D7TPX1_VITVI (tr|D7TPX1) Whole genome shotgun sequence of line PN40024,
scaffold_63.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00031907001 PE=4 SV=1
Length = 529
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 65/95 (68%), Gaps = 10/95 (10%)
Query: 54 ILAPEEEQQHTEAKPRPLSPYAIYDDLKPPTSPIPAAPLVSIPTSS-ENGGPKAGN---- 108
+LA E Q+ + K RPLSPY +YDDLKPPTSP P+AP VS+P++ GG K N
Sbjct: 426 VLAKEAIQEEAK-KTRPLSPYIVYDDLKPPTSPSPSAPTVSLPSTLPMEGGSKIDNISGN 484
Query: 109 --SAPPTA--PEDMQQHTEAKPKPLSPFSMYEDMK 139
+ PP A P+D Q H +AKP+PLSPF+MYED+K
Sbjct: 485 NTAQPPAADIPKDEQHHVQAKPRPLSPFTMYEDLK 519
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 57 PEEEQQHTEAKPRPLSPYAIYDDLKPPTSPIPA 89
P++EQ H +AKPRPLSP+ +Y+DLKPPTSP P+
Sbjct: 495 PKDEQHHVQAKPRPLSPFTMYEDLKPPTSPSPS 527
>B9H0M0_POPTR (tr|B9H0M0) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_831243 PE=4 SV=1
Length = 517
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 69 RPLSPYAIYDDLKPPTSPIPAAPLVS-IPTSSENGGPKAGNSAPPTAPE-DMQQHTEAKP 126
RPLSPYA Y DLKPPTSP P AP+ S IPTSS N P+ GN APP A D Q HTE K
Sbjct: 434 RPLSPYAAYADLKPPTSPSPTAPVGSVIPTSSTNAVPETGNRAPPMAAAIDKQHHTEPKQ 493
Query: 127 KPLSPFSMYEDMK 139
KPLSP+ MYED+K
Sbjct: 494 KPLSPYPMYEDLK 506
>A5AHG0_VITVI (tr|A5AHG0) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_033052 PE=4 SV=1
Length = 535
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 10/90 (11%)
Query: 54 ILAPEEEQQHTEAKPRPLSPYAIYDDLKPPTSPIPAAPLVSIPTSS-ENGGPKAGN---- 108
+LA E Q+ + K RPLSPY +YDDLKPPTSP P+AP VS+P++ GG K N
Sbjct: 447 VLAKEAIQEEAK-KTRPLSPYIVYDDLKPPTSPSPSAPTVSLPSTLPMEGGSKIDNISGN 505
Query: 109 --SAPPTA--PEDMQQHTEAKPKPLSPFSM 134
+ PP A P+D Q H +AKP+PLSPF+M
Sbjct: 506 NTAQPPAADIPKDEQHHVQAKPRPLSPFTM 535
>Q8H0U5_ARATH (tr|Q8H0U5) At3g18890 OS=Arabidopsis thaliana GN=At3g18890 PE=2
SV=1
Length = 641
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 17/99 (17%)
Query: 56 APEEEQ---QHTEAKPRPLSPYAIYDDLKPPTSPIPAAPLVSIPTSSE----NGGPKAGN 108
AP+E++ + KPRPLSPYA Y+DLKPPTSPIP + P S+ P N
Sbjct: 359 APKEDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEAN 418
Query: 109 SAPPTAPE--------DMQQHTEAKPKPLSPFSMYEDMK 139
P P+ +++Q E K +PLSP++ YE++K
Sbjct: 419 VVP--VPDSTSNVPVVEVKQVEEKKERPLSPYARYENLK 455
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 27/101 (26%)
Query: 66 AKPRPLSPYAIYDDLKPPTSPIPAAP----LVSIPTSSENGGPKAG---------NSAPP 112
+K RPLSPYAIY DLKPPTSP PA+ S+ +SE G N+ PP
Sbjct: 528 SKMRPLSPYAIYADLKPPTSPTPASTGPKEAASVEDNSELPGGNNDVLKTVDGNLNTIPP 587
Query: 113 TAPEDMQQHTEA--------------KPKPLSPFSMYEDMK 139
+ PE + + A KP+PLSP++MY DMK
Sbjct: 588 STPEAVPVVSSAIDTSLASGDNTAQPKPRPLSPYTMYADMK 628
>Q9LHN0_ARATH (tr|Q9LHN0) Gb|AAC26697.1 OS=Arabidopsis thaliana PE=4 SV=1
Length = 649
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 17/99 (17%)
Query: 56 APEEEQ---QHTEAKPRPLSPYAIYDDLKPPTSPIPAAPLVSIPTSSE----NGGPKAGN 108
AP+E++ + KPRPLSPYA Y+DLKPPTSPIP + P S+ P N
Sbjct: 367 APKEDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEAN 426
Query: 109 SAPPTAPE--------DMQQHTEAKPKPLSPFSMYEDMK 139
P P+ +++Q E K +PLSP++ YE++K
Sbjct: 427 VVP--VPDSTSNVPVVEVKQVEEKKERPLSPYARYENLK 463
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 27/101 (26%)
Query: 66 AKPRPLSPYAIYDDLKPPTSPIPAAP----LVSIPTSSENGGPKAG---------NSAPP 112
+K RPLSPYAIY DLKPPTSP PA+ S+ +SE G N+ PP
Sbjct: 536 SKMRPLSPYAIYADLKPPTSPTPASTGPKEAASVEDNSELPGGNNDVLKTVDGNLNTIPP 595
Query: 113 TAPEDMQQHTEA--------------KPKPLSPFSMYEDMK 139
+ PE + + A KP+PLSP++MY DMK
Sbjct: 596 STPEAVPVVSSAIDTSLASGDNTAQPKPRPLSPYTMYADMK 636
>A8IXN4_BRACM (tr|A8IXN4) Catalytic/coenzyme binding protein OS=Brassica
campestris PE=2 SV=1
Length = 624
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 26/108 (24%)
Query: 56 APEEEQQHTEAK---PRPLSPYAIYDDLKPPTSPIPAAPLVS----------IPTSSENG 102
AP+E++ E K PRPLSPYA Y+DLKPPTSPIPA L + +P E
Sbjct: 376 APKEDKAPAEVKDVKPRPLSPYAAYEDLKPPTSPIPATALGATKAKEVDATPVPEVEETQ 435
Query: 103 GPKAGNSAPPTAPED-----------MQQHTEAKPKPLSPFSMYEDMK 139
P N+ PP PE ++Q E K +PLSP++ YE++K
Sbjct: 436 APVEANAVPP--PESPVETSVPVVEEVKQVEEKKERPLSPYASYENLK 481
>D7L962_ARALY (tr|D7L962) Catalytic/ coenzyme binding protein OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_479405 PE=4 SV=1
Length = 668
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 25/109 (22%)
Query: 56 APEEEQ---QHTEAKPRPLSPYAIYDDLKPPTSPIPA---------------------AP 91
AP+E++ + + KPRPLSPYA Y+DLKPPTSPIP+ A
Sbjct: 359 APKEDEAPPKEKDVKPRPLSPYAAYEDLKPPTSPIPSSTTSVGPAKSKEVDATQVLVEAN 418
Query: 92 LVSIPTSSEN-GGPKAGNSAPPTAPEDMQQHTEAKPKPLSPFSMYEDMK 139
+V +P S+ N + ++ Q E K +PLSP++ YED+K
Sbjct: 419 VVPVPDSTSNVPVVEEEEVKQAVEEVEVMQAEEKKERPLSPYARYEDLK 467