Jatropha Genome Database

JcCB0101051.30
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0101051.30 - phase: 0 
         (230 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RAD0_RICCO (tr|B9RAD0) Putative uncharacterized protein OS=Ric...   171   4e-41
B9I3U5_POPTR (tr|B9I3U5) Predicted protein OS=Populus trichocarp...   151   6e-35
B9IFE3_POPTR (tr|B9IFE3) Predicted protein OS=Populus trichocarp...    86   2e-15

>B9RAD0_RICCO (tr|B9RAD0) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1505580 PE=4 SV=1
          Length = 259

 Score =  171 bits (434), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 152/263 (57%), Gaps = 37/263 (14%)

Query: 1   MERASKE----EQNLKQQYKHLQQEWDSIKNSKPRTLRRSATDSRTILKGLKLFDNSPRK 56
           MER +++    E  L+QQYK LQ++W SIK SK RTLRRS TDSRTI +GL   DNSPRK
Sbjct: 1   MERPTRKGKDTEAKLQQQYKSLQEKWYSIKQSKLRTLRRSLTDSRTIDRGLYFLDNSPRK 60

Query: 57  LMSSLQHTRSSLDNGEWKVRDNDLAVVEILRERRAAIQSGKLKGRRRLFNDAE------- 109
           LMS LQH RS    G WKVR+NDLAVVEILRER+AAI+SGK+KG RRLF+ AE       
Sbjct: 61  LMSLLQHRRSP-SGGAWKVRNNDLAVVEILRERKAAIKSGKIKG-RRLFDAAEGANEVNS 118

Query: 110 ------------EGDFVEETEMRSIFSYDSDNENQSVQNNQ------LCPLXXXXXXXXX 151
                       +G   E +E+RS+ SYDSD+E +++  ++      +            
Sbjct: 119 GGIQEIICSYNWDGLVQEISEVRSVCSYDSDDEKENIVESKEEMSRPVYCSSASSLSSTS 178

Query: 152 XXXXXXVCDDCMEKEMVAHEGENKMEKEPAITKQEEKRSD--VKGITRXXXXXXXXXXXX 209
                 +CD+C+EKE++  EGE  +  E   +++E+KR +  VKG               
Sbjct: 179 SSSSAYICDECIEKEILMIEGEKAVAAEVKGSEEEKKRGENGVKGWLAVGLIVIYTIGII 238

Query: 210 SFAMRSFSGYGYR--NEMVLVPT 230
           S  MRSF+   YR  N ++LVPT
Sbjct: 239 S--MRSFTIDNYRDGNMVILVPT 259


>B9I3U5_POPTR (tr|B9I3U5) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_773214 PE=4 SV=1
          Length = 284

 Score =  151 bits (381), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/265 (39%), Positives = 136/265 (51%), Gaps = 39/265 (14%)

Query: 1   MERASKEEQ----NLKQQYKHLQQEWDSIKNSKPRTLRRSATDSRTILKGLKLFDNSPRK 56
           +ER  KE +     L QQ  HL+QEWD IK SK RTLRR++TDS+ ++K  KL  NSPR 
Sbjct: 12  IERPGKEGKEIIDKLYQQLMHLEQEWDLIKQSKTRTLRRASTDSKLMVKAHKLLYNSPRD 71

Query: 57  LMSSLQHTRSSLD--NGEWKVRDNDLAVVEILRERRAAIQSGKLKGRRRL---------- 104
           LMSSLQH RS  +   G WKVR+NDLA+ EIL+ERRA I+S  LKGRR L          
Sbjct: 72  LMSSLQHGRSPPEGGGGAWKVRNNDLAIDEILKERRAGIESAGLKGRRPLGAMGSSVSEM 131

Query: 105 -FNDAEE------GDFVEETEMRSIFSYDSDNENQSVQNNQ--LCPLXXX--------XX 147
            F   EE          +E+E+RS+FSYDSD+EN++V+ ++  L P              
Sbjct: 132 GFGGIEEMICNNMDGLAQESEIRSVFSYDSDDENENVEASKEGLSPFAHHCSYSSSSSSS 191

Query: 148 XXXXXXXXXXVCDDCMEKEMVAHEGEN------KMEKEPAITKQEEKRSDVKGITRXXXX 201
                     +CD C+E+E    EGE       + E    IT QE   ++          
Sbjct: 192 SSSSSSSSSYICDGCVERESAEKEGEKVAVSSVQEENTVLITDQERYGTNRMVALGWLII 251

Query: 202 XXXXXXXXSFAMRSFSGYGYRNEMV 226
                     + RSF G+G  NE+V
Sbjct: 252 AFIVCAIGIVSKRSFGGHGVGNEVV 276


>B9IFE3_POPTR (tr|B9IFE3) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_776307 PE=4 SV=1
          Length = 211

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 21/116 (18%)

Query: 43  ILKGLKLFDNSPRKLMSSLQHTRSSLDNG--EWKVRDNDLAVVEILRERRAAIQSGKLKG 100
           ++K  KL  +SP  L SSLQH RS    G   WKV++NDLAV EIL+ERRAAI+SGKLKG
Sbjct: 1   MVKARKLLYSSPSDLKSSLQHGRSPPGGGGGAWKVKNNDLAVDEILKERRAAIESGKLKG 60

Query: 101 RRRLF----NDAEEGDF--------------VEETEMRSIFSYDSDNENQSVQNNQ 138
            RRLF    +   E DF              V+E+E+RS+FSY SD+E + V+ ++
Sbjct: 61  -RRLFEAMGSSVSEMDFGGIEEMICHNLDGLVQESEVRSVFSYASDDETEDVEASK 115