Jatropha Genome Database
- JcCB0100521.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0100521.10 - phase: 0 /partial
(107 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9SGJ2_RICCO (tr|B9SGJ2) Nucleic acid binding protein, putative ... 154 3e-36
B9MXR2_POPTR (tr|B9MXR2) Predicted protein OS=Populus trichocarp... 141 3e-32
D7SPH1_VITVI (tr|D7SPH1) Whole genome shotgun sequence of line P... 136 7e-31
A9XLG7_SOLBU (tr|A9XLG7) Putative uncharacterized protein OS=Sol... 102 2e-20
A9XLF2_PETIN (tr|A9XLF2) Putative uncharacterized protein OS=Pet... 101 3e-20
A9XLD2_SOLME (tr|A9XLD2) Putative uncharacterized protein OS=Sol... 100 7e-20
Q9FYW4_SOLLC (tr|Q9FYW4) BAC19.12 OS=Solanum lycopersicum PE=4 SV=1 100 8e-20
Q9LVQ7_ARATH (tr|Q9LVQ7) Zinc finger protein OS=Arabidopsis thal... 65 2e-09
D7MMD7_ARALY (tr|D7MMD7) Putative uncharacterized protein OS=Ara... 63 9e-09
A5B5M0_VITVI (tr|A5B5M0) Putative uncharacterized protein OS=Vit... 61 3e-08
Q9SCQ6_ARATH (tr|Q9SCQ6) At3g50700 OS=Arabidopsis thaliana GN=At... 55 2e-06
Q56YN5_ARATH (tr|Q56YN5) Zinc finger protein (Fragment) OS=Arabi... 55 2e-06
D7LTH6_ARALY (tr|D7LTH6) ATIDD2-DOMAIN 2 OS=Arabidopsis lyrata s... 54 5e-06
>B9SGJ2_RICCO (tr|B9SGJ2) Nucleic acid binding protein, putative OS=Ricinus
communis GN=RCOM_0553400 PE=4 SV=1
Length = 520
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 85/104 (81%)
Query: 4 QQDNMQWGHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLDFXXXXX 63
QQDNMQWGHR++EPEN+SVTAGLGLGLPCDGGSGLKELMM TPSVFGPKQTTLDF
Sbjct: 417 QQDNMQWGHRRVEPENSSVTAGLGLGLPCDGGSGLKELMMATPSVFGPKQTTLDFLGLGM 476
Query: 64 XXXXXXXXXXXXXITSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
ITSIGSG+DVAAAAASFGGGE+SGKD+GRSS
Sbjct: 477 AAGGGSSGGLSALITSIGSGLDVAAAAASFGGGEFSGKDMGRSS 520
>B9MXR2_POPTR (tr|B9MXR2) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_796816 PE=4 SV=1
Length = 505
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 80/106 (75%)
Query: 1 SSAQQDNMQWGHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLDFXX 60
SS QQDN QWGHRQ+EPEN S+ AGLGLGLPCDGGSGL ELMMGTPS+FGPK TLDF
Sbjct: 400 SSTQQDNTQWGHRQMEPENASLAAGLGLGLPCDGGSGLNELMMGTPSIFGPKHATLDFLE 459
Query: 61 XXXXXXXXXXXXXXXXITSIGSGMDVAAAAASFGGGEYSGKDLGRS 106
ITSIG G+DVAAAAASFGGGE+SGKD+GRS
Sbjct: 460 LGMAAGGNPSGGLSALITSIGGGLDVAAAAASFGGGEFSGKDMGRS 505
>D7SPH1_VITVI (tr|D7SPH1) Whole genome shotgun sequence of line PN40024,
scaffold_23.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00019000001 PE=4 SV=1
Length = 492
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 80/107 (74%)
Query: 1 SSAQQDNMQWGHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLDFXX 60
SS QQ+N+QW +Q+EPE+TSV AGLGLGLPCD GSGLKELMMGTPS+FGPKQTTLD
Sbjct: 376 SSGQQENLQWNRQQMEPESTSVAAGLGLGLPCDEGSGLKELMMGTPSLFGPKQTTLDLLG 435
Query: 61 XXXXXXXXXXXXXXXXITSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
ITSIG G+DVAAAAA++ GGE++GKD+GR S
Sbjct: 436 LGMAASGSPSGGLSALITSIGGGLDVAAAAATYRGGEFAGKDMGRVS 482
>A9XLG7_SOLBU (tr|A9XLG7) Putative uncharacterized protein OS=Solanum
bulbocastanum GN=12.POTATO.11 PE=4 SV=1
Length = 524
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 66/107 (61%)
Query: 1 SSAQQDNMQWGHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLDFXX 60
+S+ + +W R I+ S AGLGLGLPCD GSGLKELM+GTPS+FGPK TLD
Sbjct: 418 TSSSNRHQEWSGRPIDANGASYAAGLGLGLPCDAGSGLKELMLGTPSMFGPKHPTLDLLG 477
Query: 61 XXXXXXXXXXXXXXXXITSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
ITS+GS +D+ +A SFG ++SGKDLGR+S
Sbjct: 478 LGMAASVGPSPGLSALITSMGSNLDMVTSAGSFGTADFSGKDLGRNS 524
>A9XLF2_PETIN (tr|A9XLF2) Putative uncharacterized protein OS=Petunia
integrifolia subsp. inflata GN=12.PETUNIA.6 PE=4 SV=1
Length = 525
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
Query: 1 SSAQQDNMQWGHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLDFXX 60
+S+ +W R ++P+ S+ AGLGLGLPCD GSGLKELM+GTPSVFGPK TLD
Sbjct: 423 TSSSHGQQEWNGRPLDPDGASLAAGLGLGLPCDAGSGLKELMLGTPSVFGPKHPTLDLLG 482
Query: 61 XXXXXXXXXXXXXXXXITSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
ITS+GS +D+ ASFG ++SGKDLGR+S
Sbjct: 483 LGMAANGGPSPGLSALITSMGSNLDM----ASFGSADFSGKDLGRNS 525
>A9XLD2_SOLME (tr|A9XLD2) Putative uncharacterized protein OS=Solanum melongena
GN=12.EGGPLANT.6 PE=4 SV=1
Length = 521
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 63/99 (63%)
Query: 9 QWGHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLDFXXXXXXXXXX 68
+W R I+ S+ AGLGLGLP D GSGLKELM+GTPSVFGPK TLD
Sbjct: 423 EWNGRPIDTNGASLAAGLGLGLPRDTGSGLKELMLGTPSVFGPKHPTLDLLGLGMAASVS 482
Query: 69 XXXXXXXXITSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
ITS+GS +D+ +A SFG G++SGKDLGR+S
Sbjct: 483 PAPGLSALITSMGSNLDMVTSAGSFGSGDFSGKDLGRNS 521
>Q9FYW4_SOLLC (tr|Q9FYW4) BAC19.12 OS=Solanum lycopersicum PE=4 SV=1
Length = 519
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 66/107 (61%)
Query: 1 SSAQQDNMQWGHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLDFXX 60
+S+ + +W R + S+ AGLGLGLPCD GSGLKELM+GTPSVFGPK TLD
Sbjct: 413 TSSSNGHQEWSGRPSDANGASLAAGLGLGLPCDAGSGLKELMLGTPSVFGPKHPTLDLLG 472
Query: 61 XXXXXXXXXXXXXXXXITSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
+TS+GS +D+ +A SFG ++SGKDLGR+S
Sbjct: 473 LGMAASVGPSPGLSALLTSMGSNLDMVTSAGSFGSADFSGKDLGRNS 519
>Q9LVQ7_ARATH (tr|Q9LVQ7) Zinc finger protein OS=Arabidopsis thaliana
GN=At5g66730 PE=2 SV=1
Length = 500
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 21 SVTAGLGLGLPCDGGSG---LKELMMGTPSVFGPKQTTLDFXXXXXXXXXXXXXXXXXXI 77
S+ GLGLGLPC G LKELMMG SVFGPKQTTLDF +
Sbjct: 413 SLAPGLGLGLPCSSGGSGSGLKELMMGNSSVFGPKQTTLDF--LGLGRAVGNGGNTGGGL 470
Query: 78 TSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
+++ + + FG GE+SGKD+GRSS
Sbjct: 471 SALLTSIGGGGGIDLFGSGEFSGKDIGRSS 500
>D7MMD7_ARALY (tr|D7MMD7) Putative uncharacterized protein OS=Arabidopsis lyrata
subsp. lyrata GN=ARALYDRAFT_496927 PE=4 SV=1
Length = 496
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 21 SVTAGLGLGLPCDGGSG---LKELMMGTPSVFGPKQTTLDFXXXXXXXXXXXXXXXXXXI 77
S+ GLGLGLPC G LKELMMG SVFGPKQTTLDF +
Sbjct: 409 SLAPGLGLGLPCSSGGSGSGLKELMMGNSSVFGPKQTTLDF--LGLGRAVGNGGNTGGGL 466
Query: 78 TSIGSGMDVAAAAASFGGGEYSGKDLGRSS 107
+++ + + FG GE+S KD+GRSS
Sbjct: 467 SALLTSIGGGGGIDLFGSGEFSSKDIGRSS 496
>A5B5M0_VITVI (tr|A5B5M0) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_002826 PE=4 SV=1
Length = 597
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 1 SSAQQDN--MQW-GHRQIEPENTSVTAGLGLGLPCDGGSGLKELMMGTPSVFGPKQTTLD 57
SSAQQD+ QW GH ++ ++ V AGLGLGLP +GG L LMMG S+F K TTLD
Sbjct: 481 SSAQQDSSTTQWSGH--VKADSNPVGAGLGLGLPSEGGPALTGLMMGPSSLFVNKPTTLD 538
Query: 58 FXXXXXXXXXXXXXXXXXXITSI-GSGMDVAAAAASFGG 95
+TSI G G+D+AAA + FGG
Sbjct: 539 LLGLGMVPGGASTAGLSALLTSISGGGLDIAAAGSPFGG 577
>Q9SCQ6_ARATH (tr|Q9SCQ6) At3g50700 OS=Arabidopsis thaliana GN=At3g50700 PE=2
SV=1
Length = 452
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 33 DGGSGLKELMMGTPSVFGPKQTTLDFX-XXXXXXXXXXXXXXXXXITSIGSGMDVAAAAA 91
+ SGLKELMMG SVFGPKQTTLDF + G+G+D+ A
Sbjct: 379 ESSSGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGNGPSNGLSTLVGGGTGIDM---AT 435
Query: 92 SFGGGEYSGKDLGR 105
+FG GE+SGKD+ R
Sbjct: 436 TFGSGEFSGKDISR 449
>Q56YN5_ARATH (tr|Q56YN5) Zinc finger protein (Fragment) OS=Arabidopsis thaliana
GN=At3g50700 PE=2 SV=1
Length = 99
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 36 SGLKELMMGTPSVFGPKQTTLDFXXXXXXXXXXXX-XXXXXXITSIGSGMDVAAAAASFG 94
SGLKELMMG SVFGPKQTTLDF + G+G+D+ A +FG
Sbjct: 29 SGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGNGPSNGLSTLVGGGTGIDM---ATTFG 85
Query: 95 GGEYSGKDLGR 105
GE+SGKD+ R
Sbjct: 86 SGEFSGKDISR 96
>D7LTH6_ARALY (tr|D7LTH6) ATIDD2-DOMAIN 2 OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_485418 PE=4 SV=1
Length = 446
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 33 DGGSGLKELMMGTPSVFGPKQTTLDFX-XXXXXXXXXXXXXXXXXITSIGSGMDVAAAAA 91
+ SGLKELMMG SVFGPKQTTLDF + SG+D+ A
Sbjct: 373 ESSSGLKELMMGNSSVFGPKQTTLDFLGLGRAVGNGNGPSNGLSALVGGSSGIDM---AK 429
Query: 92 SFGGGEYSGKDLGR 105
+FG GE+SGKD+ R
Sbjct: 430 TFGSGEFSGKDISR 443