Jatropha Genome Database

JcCB0099801.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0099801.10 - phase: 0 
         (127 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RV15_RICCO (tr|B9RV15) Late embryogenesis abundant protein D-7...    97   6e-19
B9GKX9_POPTR (tr|B9GKX9) Predicted protein OS=Populus trichocarp...    56   2e-06

>B9RV15_RICCO (tr|B9RV15) Late embryogenesis abundant protein D-7, putative
           OS=Ricinus communis GN=RCOM_0898000 PE=4 SV=1
          Length = 130

 Score = 97.1 bits (240), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 76/125 (60%), Gaps = 17/125 (13%)

Query: 1   MASNDQSYSYRAGEATGRAEEKGNRMGDTVKEKAGEAKDWT-----------GEKAHXXX 49
           MAS+DQS+  RAGEATGRAEEKGNR  DTVKE+A EA+D T            EKAH   
Sbjct: 1   MASHDQSF--RAGEATGRAEEKGNRATDTVKERAREARDKTYETGQHAKENTAEKAHETR 58

Query: 50  XXXXXXXXXXXXXXXXXXXXXXGVLEETGEKMKHAAQKTADTVKSAFGMAHHEEEEDHVK 109
                                 GV+++TG+K+K+ AQKTADTVKSAFGMAH+ E+    K
Sbjct: 59  EKASETAEAAKDKTYEGKEKTKGVVQQTGDKVKNMAQKTADTVKSAFGMAHNGED----K 114

Query: 110 DRSGH 114
           D++GH
Sbjct: 115 DKAGH 119


>B9GKX9_POPTR (tr|B9GKX9) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_548610 PE=4 SV=1
          Length = 140

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 13/117 (11%)

Query: 1   MASNDQSYSYRAGEATGRAEEKGNRMGDTVKEKAGEAKDWTGEKAHXXXXXXXXXXXXXX 60
           MAS++QSY  RAGE+ GRAEEK  R+  ++KEKA E KD T E A               
Sbjct: 1   MASHEQSY--RAGESHGRAEEKTGRVTGSIKEKAREVKDKTYETAQQAKEKAAQTAQEAR 58

Query: 61  XXXXXXXXX-----------XXGVLEETGEKMKHAAQKTADTVKSAFGMAHHEEEED 106
                                 GV+++TGEK+   A+   DTVK   G+    E+ED
Sbjct: 59  EKTAETTESAKQKAQEGKDNSKGVMQQTGEKVMQMAESAKDTVKQTLGIGGPGEDED 115