Jatropha Genome Database

JcCB0099601.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0099601.10 - phase: 0 /partial
         (51 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9MYV7_POPTR (tr|B9MYV7) Predicted protein OS=Populus trichocarp...    81   3e-14
A9PJQ3_9ROSI (tr|A9PJQ3) Putative uncharacterized protein OS=Pop...    81   3e-14
C6TN61_SOYBN (tr|C6TN61) Putative uncharacterized protein OS=Gly...    81   4e-14
B9DGV9_ARATH (tr|B9DGV9) AT2G27450 protein OS=Arabidopsis thalia...    73   1e-11
A9NMW3_PICSI (tr|A9NMW3) Putative uncharacterized protein OS=Pic...    73   1e-11
D7TCT6_VITVI (tr|D7TCT6) Whole genome shotgun sequence of line P...    71   4e-11
A5C5V4_VITVI (tr|A5C5V4) Putative uncharacterized protein OS=Vit...    71   4e-11
A2X5P5_ORYSI (tr|A2X5P5) Putative uncharacterized protein OS=Ory...    64   8e-09
B7E6S1_ORYSJ (tr|B7E6S1) cDNA clone:001-038-A03, full insert seq...    61   5e-08
A9RNQ5_PHYPA (tr|A9RNQ5) Predicted protein OS=Physcomitrella pat...    59   1e-07
C5XTG0_SORBI (tr|C5XTG0) Putative uncharacterized protein Sb04g0...    59   2e-07
B6TKZ3_MAIZE (tr|B6TKZ3) Hydrolase, carbon-nitrogen family OS=Ze...    58   3e-07
D7LHK6_ARALY (tr|D7LHK6) Putative uncharacterized protein OS=Ara...    58   4e-07

>B9MYV7_POPTR (tr|B9MYV7) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_594963 PE=4 SV=1
          Length = 301

 Score = 81.3 bits (199), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 41/47 (87%)

Query: 1  MEKEKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          MEK KGREVVVSALQFACTDD+  N+ TAERLVRAAH  G+NIILIQ
Sbjct: 1  MEKGKGREVVVSALQFACTDDVAANLATAERLVRAAHKKGSNIILIQ 47


>A9PJQ3_9ROSI (tr|A9PJQ3) Putative uncharacterized protein OS=Populus
          trichocarpa x Populus deltoides PE=2 SV=1
          Length = 301

 Score = 81.3 bits (199), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/47 (80%), Positives = 41/47 (87%)

Query: 1  MEKEKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          MEK KGREVVVSALQFACTDD+  N+ TAERLVRAAH  G+NIILIQ
Sbjct: 1  MEKGKGREVVVSALQFACTDDVAANLATAERLVRAAHKKGSNIILIQ 47


>C6TN61_SOYBN (tr|C6TN61) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 299

 Score = 80.9 bits (198), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/44 (88%), Positives = 40/44 (90%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          EKGR VVVSALQFACTDDI+TNV TAERLVRAAH  GANIILIQ
Sbjct: 2  EKGRTVVVSALQFACTDDISTNVATAERLVRAAHKQGANIILIQ 45


>B9DGV9_ARATH (tr|B9DGV9) AT2G27450 protein OS=Arabidopsis thaliana
          GN=At2g27450 PE=2 SV=1
          Length = 299

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 1/48 (2%)

Query: 1  MEKE-KGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          ME E + REVVVS+LQFAC+DDI+TNV  AERLVR AH  GANIILIQ
Sbjct: 1  METEGRRREVVVSSLQFACSDDISTNVAAAERLVREAHAKGANIILIQ 48


>A9NMW3_PICSI (tr|A9NMW3) Putative uncharacterized protein OS=Picea sitchensis
          PE=2 SV=1
          Length = 300

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 36/44 (81%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          E  R VVVSALQFACTDD+ TNVD AERLVR AH  GANIILIQ
Sbjct: 5  EGERMVVVSALQFACTDDVKTNVDHAERLVREAHAKGANIILIQ 48


>D7TCT6_VITVI (tr|D7TCT6) Whole genome shotgun sequence of line PN40024,
          scaffold_80.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00036111001 PE=4 SV=1
          Length = 297

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/44 (77%), Positives = 37/44 (84%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          E  R VVVSALQFACTDD+ TN++TAERLVR AH  GANIILIQ
Sbjct: 2  EGNRVVVVSALQFACTDDVPTNLNTAERLVRDAHRKGANIILIQ 45


>A5C5V4_VITVI (tr|A5C5V4) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_037576 PE=4 SV=1
          Length = 317

 Score = 71.2 bits (173), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/44 (77%), Positives = 37/44 (84%)

Query: 4  EKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          E  R VVVSALQFACTDD+ TN++TAERLVR AH  GANIILIQ
Sbjct: 2  EGNRVVVVSALQFACTDDVPTNLNTAERLVRDAHRKGANIILIQ 45


>A2X5P5_ORYSI (tr|A2X5P5) Putative uncharacterized protein OS=Oryza sativa
          subsp. indica GN=OsI_07530 PE=4 SV=1
          Length = 301

 Score = 63.5 bits (153), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/42 (66%), Positives = 35/42 (83%)

Query: 6  GREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          GR+V V+A+QFACTD  + NVDTAERL+R AH  GANI+L+Q
Sbjct: 8  GRKVSVAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQ 49


>B7E6S1_ORYSJ (tr|B7E6S1) cDNA clone:001-038-A03, full insert sequence OS=Oryza
          sativa subsp. japonica PE=2 SV=1
          Length = 301

 Score = 60.8 bits (146), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/42 (64%), Positives = 34/42 (80%)

Query: 6  GREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          G +V V+A+QFACTD  + NVDTAERL+R AH  GANI+L+Q
Sbjct: 8  GSKVSVAAVQFACTDVESENVDTAERLIREAHKKGANIVLVQ 49


>A9RNQ5_PHYPA (tr|A9RNQ5) Predicted protein OS=Physcomitrella patens subsp.
          patens GN=PHYPADRAFT_204180 PE=4 SV=1
          Length = 296

 Score = 59.3 bits (142), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/41 (65%), Positives = 32/41 (78%)

Query: 7  REVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          R V V+ALQFAC+DD+ +NV  AE LVR AH  GANI+LIQ
Sbjct: 5  RVVGVAALQFACSDDVESNVSKAETLVRDAHAQGANIVLIQ 45


>C5XTG0_SORBI (tr|C5XTG0) Putative uncharacterized protein Sb04g021790
          OS=Sorghum bicolor GN=Sb04g021790 PE=4 SV=1
          Length = 298

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 33/47 (70%)

Query: 1  MEKEKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          M    GR+V V+A+QFACTD    NV TAERL+R AH  GA I+LIQ
Sbjct: 1  MAAAAGRKVAVAAVQFACTDVEAENVATAERLIREAHKKGAKIVLIQ 47


>B6TKZ3_MAIZE (tr|B6TKZ3) Hydrolase, carbon-nitrogen family OS=Zea mays PE=2
          SV=1
          Length = 300

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/47 (57%), Positives = 33/47 (70%)

Query: 1  MEKEKGREVVVSALQFACTDDITTNVDTAERLVRAAHGNGANIILIQ 47
          M    GR+V V+A+QFACTD    NV TAERL+R AH  GA I+L+Q
Sbjct: 1  MAAAAGRKVAVAAVQFACTDVEAENVATAERLIREAHKKGAKIVLVQ 47


>D7LHK6_ARALY (tr|D7LHK6) Putative uncharacterized protein OS=Arabidopsis
          lyrata subsp. lyrata GN=ARALYDRAFT_481644 PE=4 SV=1
          Length = 322

 Score = 57.8 bits (138), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/64 (50%), Positives = 36/64 (56%), Gaps = 23/64 (35%)

Query: 7  REVVVSALQFACTDDITTNVDTAER-----------------------LVRAAHGNGANI 43
          REVVVS+LQFAC+DDI+TNV  AER                       LVR AH  GANI
Sbjct: 8  REVVVSSLQFACSDDISTNVAAAERFVSLSLSLTINLSHLPPPCNFHVLVREAHAKGANI 67

Query: 44 ILIQ 47
          +LIQ
Sbjct: 68 VLIQ 71