Jatropha Genome Database

JcCB0097621.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0097621.10 + phase: 1 /pseudo/partial
         (125 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9FQP1_ORYSJ (tr|B9FQP1) Putative uncharacterized protein OS=Ory...    60   1e-07
B8B232_ORYSI (tr|B8B232) Putative uncharacterized protein OS=Ory...    59   2e-07

>B9FQP1_ORYSJ (tr|B9FQP1) Putative uncharacterized protein OS=Oryza sativa subsp.
           japonica GN=OsJ_22490 PE=4 SV=1
          Length = 318

 Score = 59.7 bits (143), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)

Query: 3   SLWKSLNIRAIIIDHVILLHPFEPLLTC*IKLV----------GKPRSC--VRCRICATR 50
           +L + L + A+++DH + LHP    +    +L+             R C  + C   A  
Sbjct: 23  ALGEPLGVSAVVVDHELPLHPPHAAVAHVAELLVPPPAGAAPPAAGRRCDGLHCADGAAL 82

Query: 51  RCSIRPYTSIGIEVPVRSSEGSLTPICLHKTTSCSPIICIPQT*VDSHWLTFWKWNSCGF 110
           R ++RP   +G+EV     EG L P+ L       P++ +PQ  V  H L   + ++ G 
Sbjct: 83  R-AVRPDAGVGVEVAEGGDEGGLAPVRLDAAALRRPVVRVPQARVHPHRLALGERHATGL 141

Query: 111 QVLEFSNRGPINGE 124
            VLE  +R P++ E
Sbjct: 142 VVLEVPDRCPVHRE 155


>B8B232_ORYSI (tr|B8B232) Putative uncharacterized protein OS=Oryza sativa subsp.
           indica GN=OsI_24314 PE=4 SV=1
          Length = 318

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)

Query: 3   SLWKSLNIRAIIIDHVILLHPFEPLLTC*IKLV------------GKPRSCVRCRICATR 50
           +L + L + A+++DH + LHP    +    +L+            G+ R  + C   A  
Sbjct: 23  ALGEPLGVSAVVVDHELPLHPPHAAVAHVAELLVPPPAGAAPPAAGRRRDGLHCADGAAL 82

Query: 51  RCSIRPYTSIGIEVPVRSSEGSLTPICLHKTTSCSPIICIPQT*VDSHWLTFWKWNSCGF 110
           R ++RP   +G+EV     EG L P+ L       P++ +PQ  V  H L   + ++ G 
Sbjct: 83  R-AVRPDAGVGVEVAEGGDEGGLAPVRLDAAALRRPVVRVPQARVHPHRLALGERHATGL 141

Query: 111 QVLEFSNRGPINGE 124
            VLE  +R P++ E
Sbjct: 142 VVLEVPDRCPVHRE 155