Jatropha Genome Database

JcCB0095101.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0095101.10 + phase: 0 
         (102 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9N1I2_POPTR (tr|B9N1I2) Predicted protein OS=Populus trichocarp...    71   4e-11
B9HZV7_POPTR (tr|B9HZV7) Predicted protein OS=Populus trichocarp...    70   8e-11
B9MUJ1_POPTR (tr|B9MUJ1) Predicted protein OS=Populus trichocarp...    53   9e-06

>B9N1I2_POPTR (tr|B9N1I2) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_924218 PE=4 SV=1
          Length = 118

 Score = 70.9 bits (172), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 5/64 (7%)

Query: 16 LELAAIAISLNVRLRSSNMPLHKQERALRCARSFLD-----SAPNHRPNSSDLARNRELK 70
          ++LAAIA+SLNVRLRSS+MP+  QERALR ARSFLD     SAP HRPN + LAR  + +
Sbjct: 1  MKLAAIALSLNVRLRSSDMPVDMQERALRYARSFLDDPSISSAPKHRPNPTLLARALKKE 60

Query: 71 IVSV 74
            SV
Sbjct: 61 FDSV 64


>B9HZV7_POPTR (tr|B9HZV7) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_889831 PE=4 SV=1
          Length = 133

 Score = 70.1 bits (170), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/65 (63%), Positives = 48/65 (73%), Gaps = 7/65 (10%)

Query: 8  NDCYPTEE--LELAAIAISLNVRLRSSNMPLHKQERALRCARSFLD-----SAPNHRPNS 60
           D  PTEE  ++LAAIA+SLNVRLRSS+MP+  QERALR ARSFLD     +AP  RPN 
Sbjct: 3  QDRSPTEEFRIKLAAIALSLNVRLRSSDMPVDMQERALRYARSFLDKSPSSAAPKPRPNL 62

Query: 61 SDLAR 65
          + LAR
Sbjct: 63 TLLAR 67


>B9MUJ1_POPTR (tr|B9MUJ1) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_796615 PE=4 SV=1
          Length = 154

 Score = 53.1 bits (126), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 2/50 (4%)

Query: 17 ELAAIAISLNVRLRSSNMPLHKQERALRCARSFLD--SAPNHRPNSSDLA 64
          +LAAIA++LN+RLRS++MP   QERA RC R+ LD  S  + +PN S +A
Sbjct: 40 KLAAIAVNLNIRLRSADMPDAMQERAFRCTRTLLDATSLESKKPNPSHIA 89