Jatropha Genome Database

JcCB0094891.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0094891.10 - phase: 0 /pseudo
         (152 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RGG9_RICCO (tr|B9RGG9) Putative uncharacterized protein OS=Ric...   131   2e-29
B9H5P0_POPTR (tr|B9H5P0) Predicted protein OS=Populus trichocarp...   103   7e-21
Q9LHE8_ARATH (tr|Q9LHE8) AT3g19970/MZE19_2 OS=Arabidopsis thalia...    90   9e-17
D7LAU7_ARALY (tr|D7LAU7) Putative uncharacterized protein OS=Ara...    87   9e-16
D7TY18_VITVI (tr|D7TY18) Whole genome shotgun sequence of line P...    78   3e-13
C6TA37_SOYBN (tr|C6TA37) Putative uncharacterized protein OS=Gly...    75   2e-12
D6PQ38_9BRAS (tr|D6PQ38) AT3G19970-like protein (Fragment) OS=Ca...    68   3e-10
D6PQ42_9BRAS (tr|D6PQ42) AT3G19970-like protein (Fragment) OS=Ca...    67   7e-10
D6PQ39_9BRAS (tr|D6PQ39) AT3G19970-like protein (Fragment) OS=Ca...    67   7e-10
D6PQ43_9BRAS (tr|D6PQ43) AT3G19970-like protein (Fragment) OS=Ca...    67   9e-10
D6PQ44_9BRAS (tr|D6PQ44) AT3G19970-like protein (Fragment) OS=Ne...    63   1e-08

>B9RGG9_RICCO (tr|B9RGG9) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1454020 PE=4 SV=1
          Length = 440

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/133 (58%), Positives = 88/133 (66%), Gaps = 8/133 (6%)

Query: 1   MGSLSGIIQRPIXXXXXXXXXXXXTDLSEKLPSVKSVDTCSGSLQSHSPLSDPVQEPSFS 60
           MGS S   QRPI             D   KLPS KS D+CS S +  S LS+ VQE SFS
Sbjct: 1   MGSFSANFQRPIAAAAAVAVASLAPD---KLPSRKSNDSCSTSNRLDSSLSNSVQESSFS 57

Query: 61  WVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPL-----LLHSYQSAE 115
           WVSHISVS+LT LSFV RI VPVP+TNFLV NSI K+ P+ L S +      L+SYQSAE
Sbjct: 58  WVSHISVSKLTNLSFVTRIRVPVPNTNFLVSNSIQKFPPNLLGSFIASSSPFLNSYQSAE 117

Query: 116 LAKGPKPTALTNK 128
           LAKGP+PTA TNK
Sbjct: 118 LAKGPQPTAFTNK 130


>B9H5P0_POPTR (tr|B9H5P0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_801030 PE=4 SV=1
          Length = 443

 Score =  103 bits (256), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 85/135 (62%), Gaps = 5/135 (3%)

Query: 1   MGSLSGIIQRPIXXXXXXXXXXXXTDLSEKLPSVKSVDTCSGSLQSHSPLSDPVQEPSFS 60
           M SLSG++QRP+             D S+KL S +S D+CS S QS S LS+ VQ+ +FS
Sbjct: 1   MSSLSGMLQRPVIAAAAAALASVSVDFSDKLQSFRSFDSCSTSEQSSSLLSNSVQDSNFS 60

Query: 61  WVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLA-----SPLLLHSYQSAE 115
           WVSH SVS+L   SFV RI +PVP  NF V +    +VPSTL      SPLL+  YQSAE
Sbjct: 61  WVSHSSVSKLASSSFVTRIQIPVPKLNFAVLDVSQNFVPSTLGFSVASSPLLVSLYQSAE 120

Query: 116 LAKGPKPTALTNKNL 130
           LAKGPKP+A    N+
Sbjct: 121 LAKGPKPSAFKTTNI 135


>Q9LHE8_ARATH (tr|Q9LHE8) AT3g19970/MZE19_2 OS=Arabidopsis thaliana GN=At3g19970
           PE=2 SV=1
          Length = 434

 Score = 89.7 bits (221), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/126 (43%), Positives = 68/126 (53%)

Query: 1   MGSLSGIIQRPIXXXXXXXXXXXXTDLSEKLPSVKSVDTCSGSLQSHSPLSDPVQEPSFS 60
           MGSLSGIIQRP+             D+SE+  S++S+   S S Q    +S  VQE    
Sbjct: 1   MGSLSGIIQRPLVAAAAVITASVSADVSERFSSLRSLVRGSESEQIAPSVSGLVQEERSL 60

Query: 61  WVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPLLLHSYQSAELAKGP 120
           WVS +S S+L  LSFV+RI VPVP+ + L  N       S  +   L   YQSAELAK  
Sbjct: 61  WVSQVSASKLADLSFVSRICVPVPNVDLLASNPSCSLATSVTSLSALRSVYQSAELAKAS 120

Query: 121 KPTALT 126
           KP A T
Sbjct: 121 KPVAFT 126


>D7LAU7_ARALY (tr|D7LAU7) Putative uncharacterized protein OS=Arabidopsis lyrata
           subsp. lyrata GN=ARALYDRAFT_479515 PE=4 SV=1
          Length = 434

 Score = 86.7 bits (213), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 69/126 (54%)

Query: 1   MGSLSGIIQRPIXXXXXXXXXXXXTDLSEKLPSVKSVDTCSGSLQSHSPLSDPVQEPSFS 60
           MGSLSGI+QRP+             D+SE+  S++S+   S S Q    +   VQ+    
Sbjct: 1   MGSLSGILQRPLVAAAAVIAASVSADVSERFSSLRSLVRGSDSEQIAPSVPGSVQDERSL 60

Query: 61  WVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPLLLHSYQSAELAKGP 120
           WVS +S S+L+ LSFV+RI VPVPS + L  N       S  +   L   YQSAELAK  
Sbjct: 61  WVSQVSASKLSDLSFVSRIRVPVPSVDLLASNPSCSLATSVTSLSALRCVYQSAELAKAS 120

Query: 121 KPTALT 126
           KP+A T
Sbjct: 121 KPSAFT 126


>D7TY18_VITVI (tr|D7TY18) Whole genome shotgun sequence of line PN40024,
           scaffold_71.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00034414001 PE=4 SV=1
          Length = 376

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 65/109 (59%), Gaps = 6/109 (5%)

Query: 1   MGSLSGIIQRPIXXXXXXXXXXXXTDLSEKLPSVKSVDTCSGSLQSHSPLSD-PVQEPSF 59
           MGS+SGI+QRP+            +DLS+KL  +KS +T S    +  P+ D P QE   
Sbjct: 1   MGSMSGILQRPLIAATAVAVASVSSDLSDKLQPLKSSETSS----TLKPICDSPAQESKS 56

Query: 60  SWVSHISVSRLTKLSFVNRIHVPVPSTNFL-VPNSIHKYVPSTLASPLL 107
           SWVSHIS+S+L+  SFV+R+ VPVP  N+  VPNS   + P+     LL
Sbjct: 57  SWVSHISLSKLSNFSFVSRVRVPVPHINYYPVPNSPSGFAPNLTVVVLL 105


>C6TA37_SOYBN (tr|C6TA37) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 250

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 1   MGSLSGIIQRPIXXXXXXXXXXXXTDLSEKLPSVKSVDTCSGSLQSHSPLSDPVQEPSFS 60
           M S SG IQ P+             DLS+KLPS      CS S  +HS     +QE   S
Sbjct: 1   MSSFSGAIQGPLVAAAAVAVASFSADLSDKLPSRD----CSTSDLAHSTPCSNIQESDSS 56

Query: 61  WVSHISVSRLTKLSFVNRIHVPVPSTNFLVP----NSIHK-YVPSTLASPLLLHSYQSAE 115
           WVSHIS S+L  LSFV +I VPVP+  F VP    N +   Y  S  +SPLL + Y SA+
Sbjct: 57  WVSHISDSKLANLSFVTQIPVPVPNVQFRVPSLGQNCVSNLYHSSVASSPLLRNLYHSAD 116

Query: 116 LAKGPKPTALTN 127
           L +  +  A ++
Sbjct: 117 LPRVSRSAAYSH 128


>D6PQ38_9BRAS (tr|D6PQ38) AT3G19970-like protein (Fragment) OS=Capsella
           grandiflora PE=4 SV=1
          Length = 177

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 46/77 (59%)

Query: 50  LSDPVQEPSFSWVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPLLLH 109
           +S  VQ+ SF W S +S S+L  LSF++RI VPVP+ + L P       PS  +   L  
Sbjct: 20  VSGSVQDESFXWASQVSASKLADLSFLSRIRVPVPNVDLLAPYPCCNLTPSITSLSALRS 79

Query: 110 SYQSAELAKGPKPTALT 126
           +YQSAELAK  KP+  T
Sbjct: 80  AYQSAELAKASKPSTFT 96


>D6PQ42_9BRAS (tr|D6PQ42) AT3G19970-like protein (Fragment) OS=Capsella
           grandiflora PE=4 SV=1
          Length = 177

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 46/77 (59%)

Query: 50  LSDPVQEPSFSWVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPLLLH 109
           +S  VQ+ SF W S +S S+L  LSF++RI VPVP+ + L P       PS  +   L  
Sbjct: 20  VSGSVQDESFLWASQVSASKLADLSFLSRIRVPVPNVDLLAPYPCCNLTPSITSLSALRS 79

Query: 110 SYQSAELAKGPKPTALT 126
           +YQSAELAK  KP+  T
Sbjct: 80  AYQSAELAKASKPSTFT 96


>D6PQ39_9BRAS (tr|D6PQ39) AT3G19970-like protein (Fragment) OS=Capsella
           grandiflora PE=4 SV=1
          Length = 177

 Score = 67.0 bits (162), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 46/77 (59%)

Query: 50  LSDPVQEPSFSWVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPLLLH 109
           +S  VQ+ SF W S +S S+L  LSF++RI VPVP+ + L P       PS  +   L  
Sbjct: 20  VSGSVQDESFLWASQVSASKLADLSFLSRIRVPVPNVDLLAPYPCCNLTPSITSLSALRS 79

Query: 110 SYQSAELAKGPKPTALT 126
           +YQSAELAK  KP+  T
Sbjct: 80  AYQSAELAKASKPSTFT 96


>D6PQ43_9BRAS (tr|D6PQ43) AT3G19970-like protein (Fragment) OS=Capsella
           grandiflora PE=4 SV=1
          Length = 177

 Score = 66.6 bits (161), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/77 (45%), Positives = 45/77 (58%)

Query: 50  LSDPVQEPSFSWVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPLLLH 109
           +S  VQ+ SF W S +S S+L  LSF++RI VPVP+ + L P       PS      L  
Sbjct: 20  VSGSVQDESFLWASQVSASKLADLSFLSRIRVPVPNVDLLAPYPCCNLTPSITXLSALRS 79

Query: 110 SYQSAELAKGPKPTALT 126
           +YQSAELAK  KP+  T
Sbjct: 80  AYQSAELAKASKPSTFT 96


>D6PQ44_9BRAS (tr|D6PQ44) AT3G19970-like protein (Fragment) OS=Neslia paniculata
           PE=4 SV=1
          Length = 174

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 45/77 (58%), Gaps = 3/77 (3%)

Query: 50  LSDPVQEPSFSWVSHISVSRLTKLSFVNRIHVPVPSTNFLVPNSIHKYVPSTLASPLLLH 109
           +S  VQ+ S  WVS +S S+L  LS ++RI VPVP+ + L PN      PS  A   L  
Sbjct: 20  VSGSVQDESSLWVSQVSASKLADLSLLSRIRVPVPNVDLLAPNPCCDLAPSLSA---LRS 76

Query: 110 SYQSAELAKGPKPTALT 126
            YQSAELAK  KP A T
Sbjct: 77  VYQSAELAKASKPLAFT 93