Jatropha Genome Database

JcCB0087221.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0087221.10 - phase: 0 
         (118 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RIG8_RICCO (tr|B9RIG8) Thump domain protein, putative OS=Ricin...   125   1e-27
B9GI37_POPTR (tr|B9GI37) Predicted protein OS=Populus trichocarp...   125   2e-27
B9HP06_POPTR (tr|B9HP06) Predicted protein OS=Populus trichocarp...   122   9e-27
D7SNG3_VITVI (tr|D7SNG3) Whole genome shotgun sequence of line P...   117   4e-25
D7M518_ARALY (tr|D7M518) THUMP domain-containing protein OS=Arab...    98   3e-19
Q94CK1_ARATH (tr|Q94CK1) At5g12410 OS=Arabidopsis thaliana GN=At...    96   9e-19
C6TM85_SOYBN (tr|C6TM85) Putative uncharacterized protein OS=Gly...    95   3e-18
Q56XG1_ARATH (tr|Q56XG1) Putative uncharacterized protein At5g12...    93   8e-18
B7F5C0_ORYSJ (tr|B7F5C0) cDNA clone:002-184-A08, full insert seq...    86   1e-15
Q2R2E7_ORYSJ (tr|Q2R2E7) Os11g0568600 protein OS=Oryza sativa su...    86   2e-15
B8BL44_ORYSI (tr|B8BL44) Putative uncharacterized protein OS=Ory...    86   2e-15
B6T443_MAIZE (tr|B6T443) THUMP domain containing protein OS=Zea ...    84   6e-15
A5BHQ4_VITVI (tr|A5BHQ4) Putative uncharacterized protein OS=Vit...    82   1e-14
C5Y4T0_SORBI (tr|C5Y4T0) Putative uncharacterized protein Sb05g0...    80   5e-14

>B9RIG8_RICCO (tr|B9RIG8) Thump domain protein, putative OS=Ricinus communis
          GN=RCOM_1578940 PE=4 SV=1
          Length = 382

 Score =  125 bits (314), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/69 (85%), Positives = 60/69 (86%), Gaps = 4/69 (5%)

Query: 1  MATVNNPKSAATANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQAS 60
          MAT N PKS AT      KKRKQRYLPHNKPVKKKG+YPLHPGVQGFFITCDGGRERQAS
Sbjct: 1  MATENKPKSVAT----NSKKRKQRYLPHNKPVKKKGSYPLHPGVQGFFITCDGGRERQAS 56

Query: 61 HEAINVIDS 69
          HEAINVIDS
Sbjct: 57 HEAINVIDS 65


>B9GI37_POPTR (tr|B9GI37) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_549036 PE=4 SV=1
          Length = 379

 Score =  125 bits (314), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/76 (78%), Positives = 63/76 (82%), Gaps = 1/76 (1%)

Query: 1  MATVNNPKSAATANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQAS 60
          MAT N PKS+A+   N  KKRKQRYLPHNKPVKKKG+YPLHPGVQGFFITCDGGRERQAS
Sbjct: 1  MATENKPKSSASVTTNS-KKRKQRYLPHNKPVKKKGSYPLHPGVQGFFITCDGGRERQAS 59

Query: 61 HEAINVIDSVCPFTVF 76
           EAINVIDS     VF
Sbjct: 60 REAINVIDSFYEELVF 75


>B9HP06_POPTR (tr|B9HP06) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_1088041 PE=4 SV=1
          Length = 378

 Score =  122 bits (307), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 57/69 (82%), Positives = 60/69 (86%), Gaps = 1/69 (1%)

Query: 1  MATVNNPKSAATANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQAS 60
          MAT N PKS A+A  N  KKRKQ YLPHNKPV+KKG+YPLHPGVQGFFITCDGGRERQAS
Sbjct: 1  MATENKPKSRASATTNS-KKRKQHYLPHNKPVRKKGSYPLHPGVQGFFITCDGGRERQAS 59

Query: 61 HEAINVIDS 69
           EAINVIDS
Sbjct: 60 REAINVIDS 68


>D7SNG3_VITVI (tr|D7SNG3) Whole genome shotgun sequence of line PN40024,
          scaffold_61.assembly12x (Fragment) OS=Vitis vinifera
          GN=VIT_00031548001 PE=4 SV=1
          Length = 392

 Score =  117 bits (293), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/69 (79%), Positives = 57/69 (82%), Gaps = 2/69 (2%)

Query: 1  MATVNNPKSAATANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQAS 60
          MAT N  K+    N  K KKRKQRYLPHNKPVKKKG YPLHPGVQGFFITCDGGRERQAS
Sbjct: 1  MATEN--KANPNPNTTKNKKRKQRYLPHNKPVKKKGGYPLHPGVQGFFITCDGGRERQAS 58

Query: 61 HEAINVIDS 69
           EA+NVIDS
Sbjct: 59 REALNVIDS 67


>D7M518_ARALY (tr|D7M518) THUMP domain-containing protein OS=Arabidopsis lyrata
          subsp. lyrata GN=ARALYDRAFT_488088 PE=4 SV=1
          Length = 362

 Score = 97.8 bits (242), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/57 (75%), Positives = 49/57 (85%)

Query: 13 ANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          A+ ++ KKRKQ Y P N+PVKKKG+YPL PGVQGFFI+CDGGRE QAS EAINVIDS
Sbjct: 2  ASGDQSKKRKQHYRPQNRPVKKKGSYPLKPGVQGFFISCDGGREYQASQEAINVIDS 58


>Q94CK1_ARATH (tr|Q94CK1) At5g12410 OS=Arabidopsis thaliana GN=At5g12410 PE=2
          SV=1
          Length = 376

 Score = 96.3 bits (238), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/57 (73%), Positives = 49/57 (85%)

Query: 13 ANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          A+ ++ KKRKQ Y P N+PVKKKG+YPL PGVQGFFI+CDGGRE QA+ EAINVIDS
Sbjct: 2  ASGDQSKKRKQHYRPQNRPVKKKGSYPLKPGVQGFFISCDGGREFQAAQEAINVIDS 58


>C6TM85_SOYBN (tr|C6TM85) Putative uncharacterized protein OS=Glycine max PE=2
          SV=1
          Length = 377

 Score = 94.7 bits (234), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 51/61 (83%), Gaps = 4/61 (6%)

Query: 9  SAATANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVID 68
           AA AN   GKKR+ RYLPHNK VKKKG+YPL PGVQGFFITCDGGRE QAS EA+N++D
Sbjct: 4  DAAAAN---GKKRR-RYLPHNKAVKKKGSYPLRPGVQGFFITCDGGREHQASREALNILD 59

Query: 69 S 69
          S
Sbjct: 60 S 60


>Q56XG1_ARATH (tr|Q56XG1) Putative uncharacterized protein At5g12410
          OS=Arabidopsis thaliana GN=At5g12410 PE=2 SV=1
          Length = 257

 Score = 93.2 bits (230), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 42/57 (73%), Positives = 49/57 (85%)

Query: 13 ANVNKGKKRKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          A+ ++ KKRKQ Y P N+PVKKKG+YPL PGVQGFFI+CDGGRE QA+ EAINVIDS
Sbjct: 2  ASGDQSKKRKQHYRPQNRPVKKKGSYPLKPGVQGFFISCDGGREFQAAQEAINVIDS 58


>B7F5C0_ORYSJ (tr|B7F5C0) cDNA clone:002-184-A08, full insert sequence OS=Oryza
          sativa subsp. japonica PE=2 SV=1
          Length = 365

 Score = 85.9 bits (211), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/49 (73%), Positives = 45/49 (91%), Gaps = 1/49 (2%)

Query: 21 RKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          RK++YLPH KPV+K GAYPL PGVQGFF+TCDGGRERQA+ EA++++DS
Sbjct: 21 RKRKYLPHGKPVRK-GAYPLRPGVQGFFLTCDGGRERQATREALSLLDS 68


>Q2R2E7_ORYSJ (tr|Q2R2E7) Os11g0568600 protein OS=Oryza sativa subsp. japonica
          GN=Os11g0568600 PE=2 SV=2
          Length = 374

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/49 (73%), Positives = 45/49 (91%), Gaps = 1/49 (2%)

Query: 21 RKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          RK++YLPH KPV+K GAYPL PGVQGFF+TCDGGRERQA+ EA++++DS
Sbjct: 21 RKRKYLPHGKPVRK-GAYPLRPGVQGFFLTCDGGRERQATREALSLLDS 68


>B8BL44_ORYSI (tr|B8BL44) Putative uncharacterized protein OS=Oryza sativa
          subsp. indica GN=OsI_36525 PE=4 SV=1
          Length = 374

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/49 (73%), Positives = 45/49 (91%), Gaps = 1/49 (2%)

Query: 21 RKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          RK++YLPH KPV+K GAYPL PGVQGFF+TCDGGRERQA+ EA++++DS
Sbjct: 21 RKRKYLPHGKPVRK-GAYPLRPGVQGFFLTCDGGRERQATREALSLLDS 68


>B6T443_MAIZE (tr|B6T443) THUMP domain containing protein OS=Zea mays PE=2 SV=1
          Length = 396

 Score = 83.6 bits (205), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/49 (71%), Positives = 44/49 (89%), Gaps = 1/49 (2%)

Query: 21 RKQRYLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          RK+++LPH KPV+K GAYPL PGVQGFFITCDGGRE QA+ EA++++DS
Sbjct: 19 RKRKFLPHGKPVRK-GAYPLRPGVQGFFITCDGGREHQATREALSLLDS 66


>A5BHQ4_VITVI (tr|A5BHQ4) Putative uncharacterized protein OS=Vitis vinifera
          GN=VITISV_003478 PE=4 SV=1
          Length = 298

 Score = 82.4 bits (202), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 3/61 (4%)

Query: 29 NKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDSVCPFTVFQFWKTRVLFIRF 88
          NKPVKK G YPLHPGVQGFFITCDGGRERQAS EA+NVIDS+    V++ +++      F
Sbjct: 32 NKPVKK-GGYPLHPGVQGFFITCDGGRERQASREALNVIDSI--RGVYERFQSTQAMAWF 88

Query: 89 N 89
          N
Sbjct: 89 N 89


>C5Y4T0_SORBI (tr|C5Y4T0) Putative uncharacterized protein Sb05g021960
          OS=Sorghum bicolor GN=Sb05g021960 PE=4 SV=1
          Length = 420

 Score = 80.5 bits (197), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/45 (75%), Positives = 41/45 (91%), Gaps = 1/45 (2%)

Query: 25 YLPHNKPVKKKGAYPLHPGVQGFFITCDGGRERQASHEAINVIDS 69
          +LPH KPV+K GAYPL PGVQGFFITCDGGRERQA+ EA++++DS
Sbjct: 25 FLPHGKPVRK-GAYPLRPGVQGFFITCDGGRERQATREALSLLDS 68