Jatropha Genome Database
- JcCB0086761.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0086761.10 + phase: 0 /TE/partial
(164 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Q8S6P1_ORYSJ (tr|Q8S6P1) Putative reverse transcriptase OS=Oryza... 57 4e-07
Q7G3D9_ORYSJ (tr|Q7G3D9) Retrotransposon protein, putative, uncl... 57 4e-07
B9G5C7_ORYSJ (tr|B9G5C7) Putative uncharacterized protein OS=Ory... 57 4e-07
Q2QQV8_ORYSJ (tr|Q2QQV8) Retrotransposon protein, putative, uncl... 57 5e-07
B8BJQ9_ORYSI (tr|B8BJQ9) Putative uncharacterized protein OS=Ory... 57 9e-07
B9GA06_ORYSJ (tr|B9GA06) Putative uncharacterized protein OS=Ory... 54 4e-06
Q4ZJA9_GOSHI (tr|Q4ZJA9) BZIP-like protein OS=Gossypium hirsutum... 54 5e-06
B9FNE2_ORYSJ (tr|B9FNE2) Putative uncharacterized protein OS=Ory... 54 6e-06
B8BE31_ORYSI (tr|B8BE31) Putative uncharacterized protein OS=Ory... 54 6e-06
>Q8S6P1_ORYSJ (tr|Q8S6P1) Putative reverse transcriptase OS=Oryza sativa subsp.
japonica GN=OSJNBa0073L01.7 PE=4 SV=1
Length = 1509
Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 62 SPVVSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVVRLSLVLML----QMSCRR 116
+P VSHL F DDS+ +A + +++ L YE S QV+ ++ S +
Sbjct: 874 APSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEK 933
Query: 117 SSVLYYRFLKRTFAN--YLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
+V+ ++R N YLG+ + +GR++ F +L +++W+R+Q WK K
Sbjct: 934 GAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 983
>Q7G3D9_ORYSJ (tr|Q7G3D9) Retrotransposon protein, putative, unclassified
OS=Oryza sativa subsp. japonica GN=LOC_Os10g21850 PE=4
SV=1
Length = 1505
Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 62 SPVVSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVVRLSLVLML----QMSCRR 116
+P VSHL F DDS+ +A + +++ L YE S QV+ ++ S +
Sbjct: 870 APSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEK 929
Query: 117 SSVLYYRFLKRTFAN--YLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
+V+ ++R N YLG+ + +GR++ F +L +++W+R+Q WK K
Sbjct: 930 GAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 979
>B9G5C7_ORYSJ (tr|B9G5C7) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_31232 PE=4 SV=1
Length = 1594
Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 62 SPVVSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVVRLSLVLML----QMSCRR 116
+P VSHL F DDS+ +A + +++ L YE S QV+ ++ S +
Sbjct: 902 APSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEK 961
Query: 117 SSVLYYRFLKRTFAN--YLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
+V+ ++R N YLG+ + +GR++ F +L +++W+R+Q WK K
Sbjct: 962 GAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1011
>Q2QQV8_ORYSJ (tr|Q2QQV8) Retrotransposon protein, putative, unclassified OS=Oryza
sativa subsp. japonica GN=LOC_Os12g29700 PE=4 SV=1
Length = 1621
Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 62 SPVVSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVVRLSLVLML----QMSCRR 116
+P VSHL F DDS+ +A + +++ L YE S QV+ ++ S +
Sbjct: 929 APSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEK 988
Query: 117 SSVLYYRFLKRTFAN--YLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
+V+ ++R N YLG+ + +GR++ F +L +++W+R+Q WK K
Sbjct: 989 RAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1038
>B8BJQ9_ORYSI (tr|B8BJQ9) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_35569 PE=4 SV=1
Length = 724
Score = 56.6 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 65 VSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVV-RLSLVLMLQMSC----RRSS 118
VSHL F DDS+ +A + ++ L+ YE S Q++ + +M + RR
Sbjct: 193 VSHLLFADDSLIPCRANRGDAQNLQNILTLYEEFSGQMIDKEKFAIMFSSNTGSEKRREV 252
Query: 119 VLYYRFLKRTF-ANYLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
+ + K+T YLG+ + +GR+K F +L D++WKR+Q WK K
Sbjct: 253 MQTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKDRIWKRIQGWKEK 299
>B9GA06_ORYSJ (tr|B9GA06) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_33393 PE=4 SV=1
Length = 662
Score = 54.3 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 65 VSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVV-RLSLVLMLQMSC----RRSS 118
VSHL F DDS+ +A + ++ L+ YE S Q++ + +M + RR
Sbjct: 363 VSHLLFADDSLIPCRANRGDAQNLQNILTLYEEFSGQMLNKEKFAIMFSSNTGSEKRREV 422
Query: 119 VLYYRFLKRTF-ANYLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
+ + K+T YLG+ + +GR+K F +L D++WKR+Q WK K
Sbjct: 423 MQTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKDRIWKRIQGWKEK 469
>Q4ZJA9_GOSHI (tr|Q4ZJA9) BZIP-like protein OS=Gossypium hirsutum PE=4 SV=1
Length = 237
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 62 SPVVSHLF-VDDSMFFLKAKQEKVVRIKYFLSAYE---ATSYQVVRLSLVLMLQMS-CRR 116
P +SHLF DD + FLK E + + + L+ YE V + S+ M+ R+
Sbjct: 5 GPPLSHLFFADDCLLFLKDSVESIPTLLHVLTTYEKVLGQKINVTKSSIFFAKSMNEMRK 64
Query: 117 SSVLYYRFLKRTFAN--YLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
+++ + R+ + YLG+ +GR+K F +L D++WK+ WK K
Sbjct: 65 QAIVRQLHMPRSSGDGRYLGLPYLVGRSKREIFQYLKDRIWKKAHGWKEK 114
>B9FNE2_ORYSJ (tr|B9FNE2) Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_17731 PE=4 SV=1
Length = 893
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 62 SPVVSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVV---RLSLVLMLQMS-CRR 116
+P VSHL F DDS+ K + ++ L+ YE+ S Q+V + S++ S R
Sbjct: 348 APSVSHLLFADDSLLLFKVNERSAQCLQNVLNLYESCSGQIVNKDKSSIMFSKNTSQADR 407
Query: 117 SSVLYYRFLKRTFAN--YLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
V+ + N YLG+ + +GR++ F +L ++VWK++Q WK K
Sbjct: 408 KMVMEILDISTEARNEKYLGLPVYMGRSRAKTFAYLKERVWKKIQGWKEK 457
>B8BE31_ORYSI (tr|B8BE31) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_32248 PE=4 SV=1
Length = 893
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 62 SPVVSHL-FVDDSMFFLKAKQEKVVRIKYFLSAYEATSYQVV---RLSLVLMLQMS-CRR 116
+P VSHL F DDS+ K + ++ L+ YE+ S Q+V + S++ S R
Sbjct: 348 APSVSHLLFADDSLLLFKVNERSAQCLQNVLNLYESCSGQIVNKDKSSIMFSKNTSQADR 407
Query: 117 SSVLYYRFLKRTFAN--YLGMLMSLGRNKNIAFCFLVDQVWKRLQSWKSK 164
V+ + N YLG+ + +GR++ F +L ++VWK++Q WK K
Sbjct: 408 KMVMEILDISTEARNEKYLGLPVYMGRSRAKTFAYLKERVWKKIQGWKEK 457