Jatropha Genome Database

JcCB0078191.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0078191.10 + phase: 1 /partial/short
         (34 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9SC67_RICCO (tr|B9SC67) Putative uncharacterized protein OS=Ric...    64   6e-09
B9HHF8_POPTR (tr|B9HHF8) Predicted protein OS=Populus trichocarp...    64   7e-09
D7SVX7_VITVI (tr|D7SVX7) Whole genome shotgun sequence of line P...    63   1e-08
B9H6G2_POPTR (tr|B9H6G2) Predicted protein OS=Populus trichocarp...    60   7e-08
Q9FGC8_ARATH (tr|Q9FGC8) At5g67020 OS=Arabidopsis thaliana GN=At...    57   1e-06

>B9SC67_RICCO (tr|B9SC67) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1408320 PE=4 SV=1
          Length = 398

 Score = 63.5 bits (153), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/32 (93%), Positives = 32/32 (100%)

Query: 1   DRFSDSLRKAGWSSEEVSDALGFDFRPEKEKE 32
           DRFSDSLRKAGWSSEEVSDALGFDFRPEKE++
Sbjct: 344 DRFSDSLRKAGWSSEEVSDALGFDFRPEKERK 375


>B9HHF8_POPTR (tr|B9HHF8) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_764538 PE=4 SV=1
          Length = 399

 Score = 63.5 bits (153), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/32 (93%), Positives = 32/32 (100%)

Query: 1   DRFSDSLRKAGWSSEEVSDALGFDFRPEKEKE 32
           DRFSDSLRKAGWSSEEVSDALGFDFRPEKE++
Sbjct: 346 DRFSDSLRKAGWSSEEVSDALGFDFRPEKERK 377


>D7SVX7_VITVI (tr|D7SVX7) Whole genome shotgun sequence of line PN40024,
           scaffold_31.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00022129001 PE=4 SV=1
          Length = 372

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 32/34 (94%)

Query: 1   DRFSDSLRKAGWSSEEVSDALGFDFRPEKEKETG 34
           DRFSDSLRKAGWSSEEVSDALGFD+RPEKE++  
Sbjct: 310 DRFSDSLRKAGWSSEEVSDALGFDYRPEKERKPA 343


>B9H6G2_POPTR (tr|B9H6G2) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_801120 PE=4 SV=1
          Length = 399

 Score = 60.5 bits (145), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/32 (90%), Positives = 31/32 (96%)

Query: 1   DRFSDSLRKAGWSSEEVSDALGFDFRPEKEKE 32
           DRFSDSLRKAGWSSEEVSDALGFDFR EKE++
Sbjct: 346 DRFSDSLRKAGWSSEEVSDALGFDFRAEKERK 377


>Q9FGC8_ARATH (tr|Q9FGC8) At5g67020 OS=Arabidopsis thaliana GN=At5g67020 PE=2
           SV=1
          Length = 394

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 30/31 (96%)

Query: 2   RFSDSLRKAGWSSEEVSDALGFDFRPEKEKE 32
           R S+SLRK+GWSSEEVSDALGFDFRPEKE++
Sbjct: 341 RISESLRKSGWSSEEVSDALGFDFRPEKERK 371