Jatropha Genome Database

JcCB0075891.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0075891.10 - phase: 0 /partial
         (143 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RP45_RICCO (tr|B9RP45) Putative uncharacterized protein OS=Ric...   115   1e-24
B9HA56_POPTR (tr|B9HA56) Predicted protein OS=Populus trichocarp...    89   1e-16
A5B2D3_VITVI (tr|A5B2D3) Putative uncharacterized protein OS=Vit...    80   6e-14
D7SUU5_VITVI (tr|D7SUU5) Whole genome shotgun sequence of line P...    80   6e-14
C6TFV4_SOYBN (tr|C6TFV4) Putative uncharacterized protein OS=Gly...    76   1e-12
A9PG41_POPTR (tr|A9PG41) Putative uncharacterized protein OS=Pop...    72   3e-11
B9IKX4_POPTR (tr|B9IKX4) Predicted protein OS=Populus trichocarp...    71   3e-11
C6TDE7_SOYBN (tr|C6TDE7) Putative uncharacterized protein (Fragm...    64   7e-09

>B9RP45_RICCO (tr|B9RP45) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0923990 PE=4 SV=1
          Length = 426

 Score =  115 bits (288), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/133 (56%), Positives = 87/133 (65%), Gaps = 19/133 (14%)

Query: 12  MDFDNLVVPIDGL-ETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDAS 70
           M+FD+  VPIDGL ET+H+NG+ EQS AS ++GV SN                GNL++AS
Sbjct: 1   MEFDD-TVPIDGLVETSHRNGIHEQSLASMDDGVVSN----------------GNLENAS 43

Query: 71  KLEDSGTGN-SYAVEFREGSNVHVGSNGFTGSKEGELKDGSQSEQVKSLKGPGKGKNEKP 129
           KLEDS T N S A E  E SNVHVGSNG TG KEG +K+   SE  KSLKGPGK K+EK 
Sbjct: 44  KLEDSITSNTSSAGEVCERSNVHVGSNGLTGCKEGNVKNEGHSEHAKSLKGPGKSKSEKS 103

Query: 130 SNRKTVSATXEKK 142
           SN K  SAT  KK
Sbjct: 104 SNPKNTSATQLKK 116


>B9HA56_POPTR (tr|B9HA56) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_1081611 PE=4 SV=1
          Length = 437

 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 75/133 (56%), Gaps = 15/133 (11%)

Query: 12  MDFDNLVVPIDGLETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDASK 71
           MD DN ++P  GLE AHQNG  +QSPA+GE+GV SN+ NG++          GN     K
Sbjct: 1   MDSDNHLLPDGGLEAAHQNGGHQQSPAAGEDGVVSNNLNGSV----------GN---TFK 47

Query: 72  LEDSGTGNSYAVEFREGSNVHVGSNGFTGSKEGE--LKDGSQSEQVKSLKGPGKGKNEKP 129
           L+D  T N    E  +    +VGSNG    KEGE  +KD   SE  KS KGPGK    KP
Sbjct: 48  LDDGTTDNLSTGEVEDELKAYVGSNGLPVFKEGEVKVKDADNSENAKSQKGPGKRGTAKP 107

Query: 130 SNRKTVSATXEKK 142
           S+ K  SAT  KK
Sbjct: 108 SHLKNASATQVKK 120


>A5B2D3_VITVI (tr|A5B2D3) Putative uncharacterized protein OS=Vitis vinifera
           GN=VITISV_030600 PE=4 SV=1
          Length = 440

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 1/131 (0%)

Query: 12  MDFDNLVVPIDGLETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDASK 71
           MD D+L+ P++GLE  HQNG+ EQ  A+G EGV     NGN++  T S   +GN ++   
Sbjct: 1   MDVDDLL-PVNGLEEGHQNGIHEQLSAAGGEGVIPEKVNGNLDLSTESAGMNGNAENVGM 59

Query: 72  LEDSGTGNSYAVEFREGSNVHVGSNGFTGSKEGELKDGSQSEQVKSLKGPGKGKNEKPSN 131
            +D+G  N+   E  EGS++    NG T S++ E++D   S+  K  KG GK   EK S+
Sbjct: 60  WDDNGIINASTAEVGEGSHIRARVNGLTISEDLEVEDADPSKHSKPQKGQGKSSKEKLSS 119

Query: 132 RKTVSATXEKK 142
            K    T  KK
Sbjct: 120 PKHAGTTWVKK 130


>D7SUU5_VITVI (tr|D7SUU5) Whole genome shotgun sequence of line PN40024,
           scaffold_8.assembly12x (Fragment) OS=Vitis vinifera
           GN=VIT_00035857001 PE=4 SV=1
          Length = 439

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 1/132 (0%)

Query: 11  LMDFDNLVVPIDGLETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDAS 70
           +MD D+L+ P++GLE  HQNG+ EQ  A+G EGV     NGN++  T S   +GN ++  
Sbjct: 8   VMDVDDLL-PVNGLEEGHQNGIHEQLSAAGGEGVIPEKVNGNLDLSTESAGMNGNAENVG 66

Query: 71  KLEDSGTGNSYAVEFREGSNVHVGSNGFTGSKEGELKDGSQSEQVKSLKGPGKGKNEKPS 130
             +D+G  N+   E  EGS++    NG T S++ E++D   S+  K  KG GK   EK S
Sbjct: 67  MWDDNGIINASTAEVGEGSHIRARVNGLTISEDLEVEDADPSKHSKPQKGQGKSSKEKLS 126

Query: 131 NRKTVSATXEKK 142
           + K    T  KK
Sbjct: 127 SPKHAGTTWVKK 138


>C6TFV4_SOYBN (tr|C6TFV4) Putative uncharacterized protein OS=Glycine max PE=2
           SV=1
          Length = 136

 Score = 75.9 bits (185), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 11  LMDFDNLVVPIDGLETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDAS 70
           +MD  NL+ P DGLE  HQNGV ++    G++G+ SN   G + KI  +   +GNL++  
Sbjct: 1   MMDPSNLL-PADGLEEVHQNGVHDELSIFGKDGIASNVDPG-VTKIIETAATNGNLENFI 58

Query: 71  KLEDSGTGNSYAVEFREGSNVHVGSNGFTGSKEGELKDGSQSEQVKSLKGPGKGKNEKPS 130
           + + + T  S   E +EGSN ++  N  T SKE E +   ++EQ+K  KGP K KN KP 
Sbjct: 59  QYDSTATDYSSKEEIKEGSNDNIYMNNVTISKEEEAEIIDRTEQLKVGKGPAKNKNAKPP 118

Query: 131 NRKTVSATXEKK 142
           + +   A+  KK
Sbjct: 119 SPRGSHASSVKK 130


>A9PG41_POPTR (tr|A9PG41) Putative uncharacterized protein OS=Populus trichocarpa
           PE=2 SV=1
          Length = 422

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 29/133 (21%)

Query: 12  MDFDNLVVPIDGLETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDASK 71
           MD D  + P DGLET HQNGV EQS A+ E+GV SN+ +G++                  
Sbjct: 1   MDSDYHLFPDDGLETVHQNGVHEQSAAAREDGVVSNNLSGSM------------------ 42

Query: 72  LEDSGTGNSYAVEFREGSNVHVGSNGFTGS-KEGE--LKDGSQSEQVKSLKGPGKGKNEK 128
                 GN++ V+  + +N ++ +    G  KEGE  +KD   SE+ +S KG GKG N K
Sbjct: 43  ------GNTFEVD--DCTNDNLSTREVEGELKEGEAKVKDADNSEKARSQKGSGKGGNAK 94

Query: 129 PSNRKTVSATXEK 141
           PSN K VSAT  K
Sbjct: 95  PSNPKNVSATQVK 107


>B9IKX4_POPTR (tr|B9IKX4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_578210 PE=4 SV=1
          Length = 422

 Score = 71.2 bits (173), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 29/133 (21%)

Query: 12  MDFDNLVVPIDGLETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDASK 71
           MD D  + P DGLET HQNGV EQS A+ E+GV SN+ +G++                  
Sbjct: 1   MDSDYHLFPDDGLETVHQNGVHEQSAAAREDGVVSNNLSGSM------------------ 42

Query: 72  LEDSGTGNSYAVEFREGSNVHVGSNGFTGS-KEGE--LKDGSQSEQVKSLKGPGKGKNEK 128
                 GN++ V+  + +N ++ +    G  KEGE  +KD   SE+ +S KG GKG N K
Sbjct: 43  ------GNTFEVD--DCTNDNLSTREVEGELKEGEAKVKDADNSEKARSQKGSGKGGNAK 94

Query: 129 PSNRKTVSATXEK 141
           PSN K VSAT  K
Sbjct: 95  PSNPKNVSATQVK 107


>C6TDE7_SOYBN (tr|C6TDE7) Putative uncharacterized protein (Fragment) OS=Glycine
           max PE=2 SV=1
          Length = 212

 Score = 63.5 bits (153), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 6/119 (5%)

Query: 11  LMDFDNLVVPIDGLETAHQNGVREQSPASGEEGVFSNSANGNIEKITVSTEPDGNLDDAS 70
           +MD  NL+ P DGLE  HQNGV ++   SG++ + SN   G + KI  +   +GN ++  
Sbjct: 1   MMDPSNLL-PADGLEEVHQNGVHDELSNSGKDDIASNVDPG-VTKIIETAATNGNFENFI 58

Query: 71  KLEDSGTGNSYAVEFREGSNVHVGSNGFTGSKEGELKDGSQSEQVKSLKGPGKGKNEKP 129
           + + + T  S     +EGSN ++  N  T SKE E K   ++ Q+K  KGP K KN KP
Sbjct: 59  QYDSTATDYSS----KEGSNDNIDVNNVTISKEEEAKIIDRTGQLKVGKGPAKNKNAKP 113