Jatropha Genome Database

JcCB0070851.20
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0070851.20 - phase: 0 
         (151 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9RF43_RICCO (tr|B9RF43) Putative uncharacterized protein OS=Ric...   159   1e-37
A2Q2D0_MEDTR (tr|A2Q2D0) Putative uncharacterized protein OS=Med...   115   1e-24

>B9RF43_RICCO (tr|B9RF43) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_1431320 PE=4 SV=1
          Length = 191

 Score =  159 bits (401), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/118 (65%), Positives = 96/118 (81%), Gaps = 2/118 (1%)

Query: 11  DSLKISPSREFEDYILQNLPADSHKALNSWQPVEVSIHDVDTDETFKVNLAKKQSFWSEP 70
           DSLKISPSREFED ILQN+ A SHKAL +WQP+E+SI+DVDT ET+KV+LAKK+SFW EP
Sbjct: 46  DSLKISPSREFEDIILQNISAASHKALETWQPIEISIYDVDTHETYKVHLAKKESFWFEP 105

Query: 71  LPDVGQK--KVASSDLTITMENCFDEYKDMSEMFAYSLHPFRQIIKKRKLSYDQEIGL 126
           LPD+GQK  K A+S +    ++ ++  + ++E FAYSL PFR I+KKR LSYDQEIGL
Sbjct: 106 LPDIGQKQQKSATSGIITAPKSSYESKEMIAENFAYSLQPFRHIVKKRGLSYDQEIGL 163


>A2Q2D0_MEDTR (tr|A2Q2D0) Putative uncharacterized protein OS=Medicago truncatula
           GN=MtrDRAFT_AC150244g45v2 PE=4 SV=1
          Length = 184

 Score =  115 bits (289), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/129 (49%), Positives = 85/129 (65%), Gaps = 11/129 (8%)

Query: 11  DSLKISPSREFEDYILQNLPADSHKALNSWQPVEVSIHDVDTDETFKVNLAKKQSFWSEP 70
           DSLKISPS++FE+Y+L+ +   S KAL SW P+ + I+DVDT ET+  NL+KK+SFW +P
Sbjct: 34  DSLKISPSKDFEEYVLEYMNESSRKALESWIPLNILIYDVDTCETYDSNLSKKESFWFDP 93

Query: 71  LPDVGQK-KVA---------SSDLTITMENCFDEYKDMSEMFAYSLHPFRQIIKKRKLSY 120
           +P VG+K KV          S + T+    C+D  K   E F YS+ PFR II+KR L Y
Sbjct: 94  MPLVGEKTKVGKHSFSYSSSSYEETMWELPCYDLEKARKEFF-YSIEPFRHIIRKRDLKY 152

Query: 121 DQEIGLRLV 129
           DQ+IGLR  
Sbjct: 153 DQQIGLRFC 161