Jatropha Genome Database
- JcCB0065721.30
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0065721.30 - phase: 1 /partial
(109 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9S796_RICCO (tr|B9S796) Pentatricopeptide repeat-containing pro... 129 1e-28
B9HVN2_POPTR (tr|B9HVN2) Predicted protein (Fragment) OS=Populus... 123 6e-27
A9PH93_POPTR (tr|A9PH93) Putative uncharacterized protein OS=Pop... 123 6e-27
D7TAH2_VITVI (tr|D7TAH2) Whole genome shotgun sequence of line P... 117 4e-25
D7T0S7_VITVI (tr|D7T0S7) Whole genome shotgun sequence of line P... 115 1e-24
B9HJN5_POPTR (tr|B9HJN5) Predicted protein OS=Populus trichocarp... 115 2e-24
D7M5W2_ARALY (tr|D7M5W2) Pentatricopeptide repeat-containing pro... 98 4e-19
Q7XNE0_ORYSJ (tr|Q7XNE0) OSJNBa0088A01.11 protein OS=Oryza sativ... 97 4e-19
A2XWT0_ORYSI (tr|A2XWT0) Putative uncharacterized protein OS=Ory... 97 4e-19
B6ST06_MAIZE (tr|B6ST06) Putative uncharacterized protein OS=Zea... 84 7e-15
B4F956_MAIZE (tr|B4F956) Putative uncharacterized protein OS=Zea... 83 1e-14
A9TXR2_PHYPA (tr|A9TXR2) Predicted protein OS=Physcomitrella pat... 70 6e-11
C5YR36_SORBI (tr|C5YR36) Putative uncharacterized protein Sb08g0... 62 3e-08
A9SSM7_PHYPA (tr|A9SSM7) Predicted protein OS=Physcomitrella pat... 59 2e-07
A9S042_PHYPA (tr|A9S042) Predicted protein OS=Physcomitrella pat... 57 6e-07
A9RYE6_PHYPA (tr|A9RYE6) Predicted protein OS=Physcomitrella pat... 57 6e-07
Q0DBH2_ORYSJ (tr|Q0DBH2) Os06g0565000 protein OS=Oryza sativa su... 56 1e-06
Q5Z6A6_ORYSJ (tr|Q5Z6A6) Putative fertility restorer homologue O... 56 1e-06
A2YE58_ORYSI (tr|A2YE58) Putative uncharacterized protein OS=Ory... 56 1e-06
A9SGY6_PHYPA (tr|A9SGY6) Predicted protein OS=Physcomitrella pat... 55 2e-06
D7SV48_VITVI (tr|D7SV48) Whole genome shotgun sequence of line P... 55 3e-06
>B9S796_RICCO (tr|B9S796) Pentatricopeptide repeat-containing protein, putative
OS=Ricinus communis GN=RCOM_0774710 PE=4 SV=1
Length = 449
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/95 (66%), Positives = 73/95 (76%), Gaps = 7/95 (7%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR RDAMRLV KMKV GCEPNVWIYN LLDM GRV +LRQVEKLWKEMKRRK+APDKV
Sbjct: 292 KTGRTRDAMRLVAKMKVKGCEPNVWIYNSLLDMHGRVKNLRQVEKLWKEMKRRKVAPDKV 351
Query: 66 TCTGVISAYNKL----TCLLSSSYYSQHKVKGSLL 96
T T VI+AYNK TC+ YY +++ G ++
Sbjct: 352 TYTSVIAAYNKAKEFETCV---RYYHEYRFNGGVI 383
>B9HVN2_POPTR (tr|B9HVN2) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_231523 PE=4 SV=1
Length = 525
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR RDA RLV KMK+ GCEPNVWIYN LLDM GR +LRQVEKLWKEMKRRK+APDKV
Sbjct: 369 KTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMHGRAKNLRQVEKLWKEMKRRKVAPDKV 428
Query: 66 TCTGVISAYNKLTCL-LSSSYYSQHKVKGSLL 96
T + VISAYNK + YY ++++ G ++
Sbjct: 429 TYSSVISAYNKSKEYEMCVRYYHEYRINGGVI 460
>A9PH93_POPTR (tr|A9PH93) Putative uncharacterized protein OS=Populus trichocarpa
PE=2 SV=1
Length = 184
Score = 123 bits (309), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR RDA RLV KMK+ GCEPNVWIYN LLDM GR +LRQVEKLWKEMKRRK+APDKV
Sbjct: 27 KTGRARDATRLVAKMKLKGCEPNVWIYNSLLDMHGRAKNLRQVEKLWKEMKRRKVAPDKV 86
Query: 66 TCTGVISAYNKLTCL-LSSSYYSQHKVKGSLL 96
T + VISAYNK + YY ++++ G ++
Sbjct: 87 TYSSVISAYNKSKEYEMCVRYYHEYRINGGVI 118
>D7TAH2_VITVI (tr|D7TAH2) Whole genome shotgun sequence of line PN40024,
scaffold_10.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00010259001 PE=4 SV=1
Length = 552
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%), Gaps = 7/95 (7%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR+R+AMRLV KMK GCEPNVW+YN L+DM GRV +LRQVEKLWKEMKR+K+ PD+V
Sbjct: 384 KTGRLREAMRLVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRV 443
Query: 66 TCTGVISAYNKL----TCLLSSSYYSQHKVKGSLL 96
+ T VISAY+K TC+ +Y + ++ G ++
Sbjct: 444 SYTSVISAYSKAGDFETCM---RFYHEFRMNGGVI 475
>D7T0S7_VITVI (tr|D7T0S7) Whole genome shotgun sequence of line PN40024,
scaffold_65.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00032336001 PE=4 SV=1
Length = 568
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 72/95 (75%), Gaps = 7/95 (7%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR+R+AMRLV KMK GC+PNVW+YN L+DM GRV +LRQVEKLWKEMKR+K+ PD+V
Sbjct: 370 KTGRLREAMRLVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRV 429
Query: 66 TCTGVISAYNKL----TCLLSSSYYSQHKVKGSLL 96
+ T VISAY+K TC+ +Y + ++ G ++
Sbjct: 430 SYTSVISAYSKAGDFETCM---RFYHEFRMNGGVI 461
>B9HJN5_POPTR (tr|B9HJN5) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_564741 PE=4 SV=1
Length = 404
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR RDAMRLV KMK+ GC+PN WIYN L+DM GR LR+VEKLWKEMKRRK+APDKV
Sbjct: 256 KTGRPRDAMRLVAKMKLKGCQPNTWIYNSLVDMHGRAKDLRRVEKLWKEMKRRKVAPDKV 315
Query: 66 TCTGVISAYNKLTCL-LSSSYYSQHKVKGSLL 96
T T +ISAY+K + ++ ++++ G ++
Sbjct: 316 TYTSIISAYSKSKEYEMCVRFFHEYRINGGVI 347
>D7M5W2_ARALY (tr|D7M5W2) Pentatricopeptide repeat-containing protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909329
PE=4 SV=1
Length = 609
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 54/68 (79%)
Query: 9 RIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCT 68
R+ DA++L+ KMK GC+PN+WIYN L+DM GR LR+ EK+WKEMKR K+ PDKV+ T
Sbjct: 438 RLSDAVKLMAKMKQRGCKPNIWIYNSLIDMHGRAKDLRRAEKIWKEMKRAKVLPDKVSYT 497
Query: 69 GVISAYNK 76
+ISAYN+
Sbjct: 498 SMISAYNR 505
>Q7XNE0_ORYSJ (tr|Q7XNE0) OSJNBa0088A01.11 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0088A01.11 PE=2 SV=2
Length = 606
Score = 97.4 bits (241), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 9 RIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCT 68
R DAMRL+ MK GCEPN+W+YN LLDM GR+ + RQ EK+WKEM RRKI PD+++ T
Sbjct: 450 RASDAMRLLAVMKKKGCEPNIWVYNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYT 509
Query: 69 GVISAYNK 76
+I+A+N+
Sbjct: 510 AIINAFNR 517
>A2XWT0_ORYSI (tr|A2XWT0) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_17116 PE=4 SV=1
Length = 608
Score = 97.4 bits (241), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 9 RIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTCT 68
R DAMRL+ MK GCEPN+W+YN LLDM GR+ + RQ EK+WKEM RRKI PD+++ T
Sbjct: 452 RASDAMRLLAVMKKKGCEPNIWVYNSLLDMHGRLGNSRQAEKIWKEMMRRKIQPDRISYT 511
Query: 69 GVISAYNK 76
+I+A+N+
Sbjct: 512 AIINAFNR 519
>B6ST06_MAIZE (tr|B6ST06) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 603
Score = 83.6 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 8 GRIR---DAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDK 64
G+IR +A RL+ MK GCEPNV +YN LLDM GR+ + +Q EK+WKEM RRK+ PD+
Sbjct: 443 GKIRRASEATRLLALMKQKGCEPNVLVYNSLLDMHGRLGNSKQAEKIWKEMLRRKVRPDR 502
Query: 65 VTCTGVISAYNK 76
++ T +I A N+
Sbjct: 503 ISYTAIILANNR 514
>B4F956_MAIZE (tr|B4F956) Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 419
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 8 GRIR---DAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDK 64
G+IR +A RL+ MK GCEPNV +YN LLDM GR+ + +Q EK+WKEM RRK+ PD+
Sbjct: 259 GKIRRASEATRLLALMKQKGCEPNVLVYNSLLDMHGRLGNSKQAEKIWKEMVRRKVRPDR 318
Query: 65 VTCTGVISAYNK 76
++ T +I A N+
Sbjct: 319 ISYTAIILANNR 330
>A9TXR2_PHYPA (tr|A9TXR2) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_199299 PE=4 SV=1
Length = 540
Score = 70.5 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 8 GRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKVTC 67
G++++A RL + MK GC+ N+ +YN +LDM G+ + E+L E+K K+ PD VT
Sbjct: 353 GKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTY 412
Query: 68 TGVISAYNKL----TCLLSSSYYSQHKVKGSLL--LLVPVYI 103
T +I+AYN+L C+ + QH+ G L +LV + I
Sbjct: 413 TTLINAYNRLGRFEECI---RVFEQHRADGLKLDRILVAIMI 451
>C5YR36_SORBI (tr|C5YR36) Putative uncharacterized protein Sb08g002022 (Fragment)
OS=Sorghum bicolor GN=Sb08g002022 PE=4 SV=1
Length = 695
Score = 61.6 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
+ F+ ++G + +A L +MK GC P+V YN L+D G+ L +VE+L EM++
Sbjct: 207 IDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGC 266
Query: 61 APDKVTCTGVISAYNKLTCLLSS-SYYSQHKVKGSLLLLVPVYIF 104
A D VT +I+ ++K + + SY+ + K +G + +V F
Sbjct: 267 AADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311
>A9SSM7_PHYPA (tr|A9SSM7) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_134771 PE=4 SV=1
Length = 410
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L+ R+GR AM L M+ GC P+++ YN ++DM GR + E ++ EM+R+
Sbjct: 213 LKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGC 272
Query: 61 APDKVTCTGVISAYNK 76
PD+VT ++ AY+K
Sbjct: 273 TPDRVTYNTMLDAYSK 288
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R+GR RD L+ MK GC P++W YN LLD G+ S + +++ E+K +P+ V
Sbjct: 291 RRGRARD---LLKTMKRAGCTPDLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLV 347
Query: 66 TCTGVISAYNKL 77
+ + +I+ Y +L
Sbjct: 348 SFSALINMYGRL 359
>A9S042_PHYPA (tr|A9S042) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_162062 PE=4 SV=1
Length = 1043
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
L + + GR+ A +L+ +M+ GC P++ YN L+D G++ + + E +K MK + I
Sbjct: 885 LSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGI 944
Query: 61 APDKVTCTGVISAYNKLTCLLSS 83
PD +T T +I + K+ LL +
Sbjct: 945 VPDVITFTSLIESLGKVDKLLEA 967
>A9RYE6_PHYPA (tr|A9RYE6) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_72179 PE=4 SV=1
Length = 505
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 7 KGR-IRDAMRLVTKMKVNG-CEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDK 64
KGR AM+L KMK C+PN+ YN LL ++ + QV++ +KEM+ KI PD
Sbjct: 165 KGRGFEAAMKLFEKMKQKPKCQPNLVTYNILLRASAQLGDVVQVDRFFKEMEAAKIYPDL 224
Query: 65 VTCTGVISAY 74
VT GVI AY
Sbjct: 225 VTYNGVIGAY 234
>Q0DBH2_ORYSJ (tr|Q0DBH2) Os06g0565000 protein OS=Oryza sativa subsp. japonica
GN=Os06g0565000 PE=4 SV=1
Length = 687
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
+ F+ ++G + +A L ++MK GC P+V +N L+D G+ L +VE+L +EM+R
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254
Query: 61 APDKVTCTGVISAYNKLTCLLSS-SYYSQHKVKGSLLLLVPVYIF 104
D VT +I+ + K + ++ Y++ K +G + +V F
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299
>Q5Z6A6_ORYSJ (tr|Q5Z6A6) Putative fertility restorer homologue OS=Oryza sativa
subsp. japonica GN=P0513E02.9 PE=4 SV=1
Length = 713
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
+ F+ ++G + +A L ++MK GC P+V +N L+D G+ L +VE+L +EM+R
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254
Query: 61 APDKVTCTGVISAYNKLTCLLSS-SYYSQHKVKGSLLLLVPVYIF 104
D VT +I+ + K + ++ Y++ K +G + +V F
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299
>A2YE58_ORYSI (tr|A2YE58) Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_23402 PE=4 SV=1
Length = 619
Score = 55.8 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 1 LQFMVRKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKI 60
+ F+ ++G + +A L ++MK GC P+V +N L+D G+ L +VE+L +EM+R
Sbjct: 195 IDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGC 254
Query: 61 APDKVTCTGVISAYNKLTCLLSS-SYYSQHKVKGSLLLLVPVYIF 104
D VT +I+ + K + ++ Y++ K +G + +V F
Sbjct: 255 KADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299
>A9SGY6_PHYPA (tr|A9SGY6) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_212221 PE=4 SV=1
Length = 505
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
R G++ A L+ +M+ NGC PN+ YN L+ G+ ++L +L+ EMK R +AP+ V
Sbjct: 354 RAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVV 413
Query: 66 TCTGVISAYNK 76
+ + +I + K
Sbjct: 414 SYSSLIEGFGK 424
>D7SV48_VITVI (tr|D7SV48) Whole genome shotgun sequence of line PN40024,
scaffold_8.assembly12x (Fragment) OS=Vitis vinifera
GN=VIT_00035975001 PE=4 SV=1
Length = 1113
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 6 RKGRIRDAMRLVTKMKVNGCEPNVWIYNFLLDMQGRVNSLRQVEKLWKEMKRRKIAPDKV 65
+ GR+ DA++L+++M+ NGC+P V I N L+D + + + + K+++ MK K+AP V
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVV 578
Query: 66 TCTGVISAYNK 76
T +++ K
Sbjct: 579 TYNTLLAGLGK 589