Jatropha Genome Database
- JcCB0065721.10
BLASTP 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0065721.10 - phase: 0
(105 letters)
Database: trembl
11,636,205 sequences; 3,746,823,912 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
B9S770_RICCO (tr|B9S770) Brg-1 associated factor, putative OS=Ri... 105 2e-21
B9N4U9_POPTR (tr|B9N4U9) Predicted protein OS=Populus trichocarp... 93 9e-18
B9HRW3_POPTR (tr|B9HRW3) Predicted protein OS=Populus trichocarp... 92 1e-17
B9S8L0_RICCO (tr|B9S8L0) Upstream activation factor subunit UAF3... 83 9e-15
D7KEY1_ARALY (tr|D7KEY1) SWIB complex BAF60b domain-containing p... 82 2e-14
Q9LJ56_ARATH (tr|Q9LJ56) Gb|AAD43149.1 OS=Arabidopsis thaliana G... 82 2e-14
D7L975_ARALY (tr|D7L975) SWIB complex BAF60b domain-containing p... 82 2e-14
Q9XIB9_ARATH (tr|Q9XIB9) F13F21.4 protein OS=Arabidopsis thalian... 82 3e-14
Q501B9_ARATH (tr|Q501B9) At1g49520 OS=Arabidopsis thaliana GN=At... 81 3e-14
B6SZA4_MAIZE (tr|B6SZA4) SWIB/MDM2 domain containing protein OS=... 77 6e-13
C5WZA9_SORBI (tr|C5WZA9) Putative uncharacterized protein Sb01g0... 77 7e-13
B9H6D0_POPTR (tr|B9H6D0) Predicted protein (Fragment) OS=Populus... 77 8e-13
Q10EQ6_ORYSJ (tr|Q10EQ6) Putative uncharacterized protein OS=Ory... 76 1e-12
B8AKI0_ORYSI (tr|B8AKI0) Putative uncharacterized protein OS=Ory... 76 1e-12
Q8W5G1_ORYSJ (tr|Q8W5G1) Putative parathymosin OS=Oryza sativa s... 76 1e-12
B6SRJ0_MAIZE (tr|B6SRJ0) SWIB/MDM2 domain containing protein OS=... 74 4e-12
B7FL31_MEDTR (tr|B7FL31) Putative uncharacterized protein (Fragm... 72 1e-11
A5BDQ8_VITVI (tr|A5BDQ8) Putative uncharacterized protein OS=Vit... 72 2e-11
A9SQH2_PHYPA (tr|A9SQH2) Predicted protein OS=Physcomitrella pat... 65 2e-09
A9NW56_PICSI (tr|A9NW56) Putative uncharacterized protein OS=Pic... 65 3e-09
A9SKS3_PHYPA (tr|A9SKS3) Predicted protein OS=Physcomitrella pat... 63 1e-08
A9P0X2_PICSI (tr|A9P0X2) Putative uncharacterized protein OS=Pic... 59 2e-07
C1FHH6_9CHLO (tr|C1FHH6) Animal specific-mbd4, 5 and 6 OS=Microm... 54 4e-06
>B9S770_RICCO (tr|B9S770) Brg-1 associated factor, putative OS=Ricinus communis
GN=RCOM_0774050 PE=4 SV=1
Length = 614
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/58 (89%), Positives = 56/58 (96%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLETL 58
MVSDSDLVTRLRE+LQDSDL+TATAGS+RRKLEE FGV+LSDRKAFIREQID YLETL
Sbjct: 1 MVSDSDLVTRLREILQDSDLNTATAGSVRRKLEEVFGVDLSDRKAFIREQIDSYLETL 58
>B9N4U9_POPTR (tr|B9N4U9) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_744224 PE=4 SV=1
Length = 384
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLETL 58
MVSDSDLVTRLRE+L+ SDLDTATAGSIRR+LEE+ GV+LS++K FIREQID +LET
Sbjct: 1 MVSDSDLVTRLREILRRSDLDTATAGSIRRQLEEDLGVDLSEKKKFIREQIDTFLETF 58
>B9HRW3_POPTR (tr|B9HRW3) Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1087039 PE=4 SV=1
Length = 458
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLETL 58
MVSDSDLV RLRE+L+ SDLDTATA SIRR+LEE+FGV+LS++K FIREQID +LETL
Sbjct: 1 MVSDSDLVARLREILRSSDLDTATASSIRRQLEEDFGVDLSEKKKFIREQIDTFLETL 58
>B9S8L0_RICCO (tr|B9S8L0) Upstream activation factor subunit UAF30, putative
OS=Ricinus communis GN=RCOM_0602170 PE=4 SV=1
Length = 322
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 52/57 (91%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSDS+L+ RLRE L++SDL+T T G +RR+LEE+FG++LSD+KAFIREQ+D++L++
Sbjct: 1 MVSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFLQS 57
>D7KEY1_ARALY (tr|D7KEY1) SWIB complex BAF60b domain-containing protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_474089 PE=4 SV=1
Length = 372
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSDSDLVT+LRE+L+ SDL+T T S+RR+LE FGV L+D+KAF+REQID +LE+
Sbjct: 1 MVSDSDLVTQLREILRSSDLETTTPASVRRQLEAYFGVELTDKKAFVREQIDAFLES 57
>Q9LJ56_ARATH (tr|Q9LJ56) Gb|AAD43149.1 OS=Arabidopsis thaliana GN=At3g19080
PE=4 SV=1
Length = 452
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 50/57 (87%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSD DLVTRLRE+L SDL+TAT S+RR+LE +FGV+L+D+KA+IR+QID +LE+
Sbjct: 1 MVSDLDLVTRLREILGSSDLNTATPASVRRQLEADFGVDLTDKKAYIRDQIDTFLES 57
>D7L975_ARALY (tr|D7L975) SWIB complex BAF60b domain-containing protein
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_318665 PE=4 SV=1
Length = 463
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 50/57 (87%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSD DLVTRLRE+L SDL+TAT S+RR+LE +FG++L+D+KA+IR+QID +LE+
Sbjct: 1 MVSDLDLVTRLREILGSSDLNTATPASVRRQLEADFGIDLTDKKAYIRDQIDTFLES 57
>Q9XIB9_ARATH (tr|Q9XIB9) F13F21.4 protein OS=Arabidopsis thaliana GN=F13F21.4
PE=4 SV=1
Length = 386
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSDSDLVT+LRE+L+ SDL+T T S+RR+LE FGV L+D+KAF+REQID +LE+
Sbjct: 1 MVSDSDLVTQLREILRSSDLETTTPASVRRQLEVYFGVELTDKKAFVREQIDAFLES 57
>Q501B9_ARATH (tr|Q501B9) At1g49520 OS=Arabidopsis thaliana GN=At1g49520 PE=2
SV=1
Length = 372
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSDSDLVT+LRE+L+ SDL+T T S+RR+LE FGV L+D+KAF+REQID +LE+
Sbjct: 1 MVSDSDLVTQLREILRSSDLETTTPASVRRQLEVYFGVELTDKKAFVREQIDAFLES 57
>B6SZA4_MAIZE (tr|B6SZA4) SWIB/MDM2 domain containing protein OS=Zea mays PE=2
SV=1
Length = 329
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYL 55
MVSDS+LV RL+EVL+ SDL+T T ++RR+LEE+FG +LS +KAFIREQ+D++L
Sbjct: 1 MVSDSELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>C5WZA9_SORBI (tr|C5WZA9) Putative uncharacterized protein Sb01g007140
OS=Sorghum bicolor GN=Sb01g007140 PE=4 SV=1
Length = 326
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 48/55 (87%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYL 55
MVSDS+LV RL+EVL+ SDL+T T ++RR+LEE+FG +LS +KAFIREQ+D++L
Sbjct: 1 MVSDSELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>B9H6D0_POPTR (tr|B9H6D0) Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_208461 PE=4 SV=1
Length = 313
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 48/57 (84%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSDS+L RL+E L+++DLD T G++RRKLEE+F ++LSD+K FIREQ+D++L+
Sbjct: 1 MVSDSELTERLKEFLRNADLDKTTTGTVRRKLEEDFAIDLSDKKVFIREQVDLFLQN 57
>Q10EQ6_ORYSJ (tr|Q10EQ6) Putative uncharacterized protein OS=Oryza sativa
subsp. japonica GN=LOC_Os03g55570 PE=4 SV=1
Length = 334
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYL 55
MVSDS+LV RLREVL+ SDL+T T +RR+LEE+FGV+LSD+K FIREQ+D+ L
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLL 55
>B8AKI0_ORYSI (tr|B8AKI0) Putative uncharacterized protein OS=Oryza sativa
subsp. indica GN=OsI_13647 PE=4 SV=1
Length = 334
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYL 55
MVSDS+LV RLREVL+ SDL+T T +RR+LEE+FGV+LSD+K FIREQ+D+ L
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLL 55
>Q8W5G1_ORYSJ (tr|Q8W5G1) Putative parathymosin OS=Oryza sativa subsp. japonica
GN=OSJNBa0002J24.24 PE=4 SV=1
Length = 303
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYL 55
MVSDS+LV RLREVL+ SDL+T T +RR+LEE+FGV+LSD+K FIREQ+D+ L
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLL 55
>B6SRJ0_MAIZE (tr|B6SRJ0) SWIB/MDM2 domain containing protein OS=Zea mays PE=2
SV=1
Length = 328
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 47/55 (85%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYL 55
MVSD +LV RL+EVL+ SDL+T T ++RR+LEE+FG +LS +KAFIREQ+D++L
Sbjct: 1 MVSDLELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>B7FL31_MEDTR (tr|B7FL31) Putative uncharacterized protein (Fragment)
OS=Medicago truncatula PE=2 SV=1
Length = 320
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 49/58 (84%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLETL 58
MVS+S+L+ RLRE L++SD +T T ++RR+LE +FG++LSDRK+FIR Q D++L+T+
Sbjct: 1 MVSESELIDRLREFLRNSDPNTTTTSTVRRQLESDFGIDLSDRKSFIRGQADLFLQTV 58
>A5BDQ8_VITVI (tr|A5BDQ8) Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_044372 PE=4 SV=1
Length = 332
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSDS+LV RL E L+ SDL+T T +RRKLEE+FG++LS +KAFIRE +D++L++
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFLQS 57
>A9SQH2_PHYPA (tr|A9SQH2) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_187352 PE=4 SV=1
Length = 308
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 45/56 (80%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLE 56
MVSD+++V L VL+ +DL+T T IR++L+ + GV+LSD+KAFIR+Q+D+YL+
Sbjct: 1 MVSDAEIVRHLTAVLKKADLNTTTTTEIRQQLQSDLGVDLSDKKAFIRQQVDLYLQ 56
>A9NW56_PICSI (tr|A9NW56) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 297
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIY 54
MV + ++ RL+E+LQ +DL T T SIRRKLEEE GV+L+ +KAFIREQ+D+Y
Sbjct: 1 MVLEQEIAERLKEILQTADLTTTTTTSIRRKLEEELGVDLTSKKAFIREQVDLY 54
>A9SKS3_PHYPA (tr|A9SKS3) Predicted protein OS=Physcomitrella patens subsp.
patens GN=PHYPADRAFT_229959 PE=4 SV=1
Length = 380
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 46/56 (82%)
Query: 1 MVSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLE 56
MVSD+++V L EVL+++DL+T T +IR++L+ GV+L+D+KAFIR+Q+D YL+
Sbjct: 27 MVSDAEIVRHLTEVLKNADLNTTTTTAIRQQLQIALGVDLTDKKAFIRQQVDAYLQ 82
>A9P0X2_PICSI (tr|A9P0X2) Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 299
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 1 MVSDSDLVTRLREVLQDSDLDT-ATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
MVSD +LV RL +L+ D T TA SIR+KLE EFGV L D++AFI I++Y++
Sbjct: 1 MVSDEELVGRLETLLRHVDFSTITTADSIRQKLEGEFGVKLGDKEAFISHHINLYIQC 58
>C1FHH6_9CHLO (tr|C1FHH6) Animal specific-mbd4, 5 and 6 OS=Micromonas sp.
RCC299 GN=MICPUN_106177 PE=4 SV=1
Length = 288
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 41/56 (73%)
Query: 2 VSDSDLVTRLREVLQDSDLDTATAGSIRRKLEEEFGVNLSDRKAFIREQIDIYLET 57
DS ++ RL ++L+ +DL+ T +I+++LE + GV +SDRK FIRE+++ +L++
Sbjct: 14 TKDSQVIKRLHQILKTADLEKTTVKNIQKQLEADLGVPMSDRKQFIREEVEKFLKS 69