Jatropha Genome Database

JcCB0062531.10
Show Alignment:  
BLASTP 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0062531.10 - phase: 0 
         (124 letters)

Database: trembl 
           11,636,205 sequences; 3,746,823,912 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9S7I2_RICCO (tr|B9S7I2) Putative uncharacterized protein OS=Ric...   122   1e-26
B9S7I3_RICCO (tr|B9S7I3) Putative uncharacterized protein OS=Ric...   102   1e-20
B9N9U0_POPTR (tr|B9N9U0) Predicted protein OS=Populus trichocarp...    84   5e-15
B9N9T7_POPTR (tr|B9N9T7) Predicted protein OS=Populus trichocarp...    80   8e-14
B9IFR7_POPTR (tr|B9IFR7) Predicted protein OS=Populus trichocarp...    79   1e-13
B9H3N7_POPTR (tr|B9H3N7) Predicted protein OS=Populus trichocarp...    79   1e-13
B9N9R4_POPTR (tr|B9N9R4) Predicted protein OS=Populus trichocarp...    76   1e-12
B9P9D9_POPTR (tr|B9P9D9) Predicted protein OS=Populus trichocarp...    69   1e-10
B9MUD7_POPTR (tr|B9MUD7) Predicted protein OS=Populus trichocarp...    65   2e-09

>B9S7I2_RICCO (tr|B9S7I2) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0608020 PE=4 SV=1
          Length = 133

 Score =  122 bits (306), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 87/136 (63%), Gaps = 15/136 (11%)

Query: 1   MGKLNKQYLQHXX-XXXXXXXXXXXXXXXITYISNPTMVRATNASEFRAIVQELTGKDSK 59
           MGKL+KQY Q                   ITYISNPT+VRATNASEFRAIVQELTGKDSK
Sbjct: 1   MGKLSKQYFQQGQLPKSQKHTKNKKKPVKITYISNPTLVRATNASEFRAIVQELTGKDSK 60

Query: 60  ILDSWDI-PCTTSILEEATQLVTDHRYETPSLKIDSE------SAYTS----MEDNLFWK 108
           +LD+WD  P TTS  E A+Q+     YE+PS KIDSE      S+YTS    ++D  FW+
Sbjct: 61  VLDTWDPDPYTTSHEEAASQVPN---YESPSSKIDSESVADAFSSYTSSSLELDDGSFWR 117

Query: 109 DFSDSFSEFQSHCIFV 124
           + S+SF EF S  +FV
Sbjct: 118 NISESFFEFNSPRVFV 133


>B9S7I3_RICCO (tr|B9S7I3) Putative uncharacterized protein OS=Ricinus communis
           GN=RCOM_0608030 PE=4 SV=1
          Length = 136

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/129 (51%), Positives = 78/129 (60%), Gaps = 16/129 (12%)

Query: 1   MGKL-NKQYLQHXXXXXXXXXXXXXXXXXITYISNPTMVRATNASEFRAIVQELTGKDSK 59
           MGKL NKQ  QH                 ITYIS+PTMVRA NASEFRAIVQELTGKDSK
Sbjct: 3   MGKLSNKQCFQHQQPKFLNPSKNRKKPIKITYISSPTMVRAANASEFRAIVQELTGKDSK 62

Query: 60  ILDSWDIPCTTSILEEATQLVTDHRYETPSLKIDSE------SAYTSME----DNLFWKD 109
           +LD+W+    +SI EEA Q V+++   TP  K DSE      S+YTS      +N  W D
Sbjct: 63  VLDNWE----SSINEEACQ-VSNNCEATPCPKTDSESMDDILSSYTSSSALEMNNDSWID 117

Query: 110 FSDSFSEFQ 118
           F +SF EFQ
Sbjct: 118 FPESFFEFQ 126


>B9N9U0_POPTR (tr|B9N9U0) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_787207 PE=4 SV=1
          Length = 125

 Score = 84.0 bits (206), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 17/104 (16%)

Query: 29  ITYISNPTMVRATNASEFRAIVQELTGKDSKILDSWDIPCTTSILEEATQLVTDHRYETP 88
           I YIS+PTMV+ATNA+EFRAIVQELTGKDSK+ D    PC  +  EEA+Q+    R+ TP
Sbjct: 31  IKYISSPTMVKATNATEFRAIVQELTGKDSKVED----PCDAN--EEASQV---PRHGTP 81

Query: 89  SLKIDS--------ESAYTSMEDNLFWKDFSDSFSEFQSHCIFV 124
              ++S         S +   ED   W D S+   E Q  C+FV
Sbjct: 82  RFDVESVDGAFCNNTSPFLQKEDGFVWGDVSERAFELQYPCVFV 125


>B9N9T7_POPTR (tr|B9N9T7) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_787204 PE=4 SV=1
          Length = 126

 Score = 80.1 bits (196), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 58/104 (55%), Gaps = 16/104 (15%)

Query: 29  ITYISNPTMVRATNASEFRAIVQELTGKDSKILDSWDIPCTTSILEEATQLVTDHRYETP 88
           I YIS+PTMV+ATNA+EFRAIVQELTGKDSK+ D  D        EEA+  V   R+ TP
Sbjct: 31  IKYISSPTMVKATNATEFRAIVQELTGKDSKVEDPSD------ANEEASHQVP--RHGTP 82

Query: 89  SLKIDS--------ESAYTSMEDNLFWKDFSDSFSEFQSHCIFV 124
              ++S           +   ED   W D S+   E Q  C+FV
Sbjct: 83  RFDVESVDGAFNNNTPPFLQAEDGFVWGDVSERAFELQYPCVFV 126


>B9IFR7_POPTR (tr|B9IFR7) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_777600 PE=4 SV=1
          Length = 138

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 11/100 (11%)

Query: 29  ITYISNPTMVRATNASEFRAIVQELTGKDSKILDSWDIPCTTSILEEATQLVTDHRYETP 88
           ITYIS+PTMV+ATNASEFRAIVQELTGKDSK+ D +D     S  EEA+Q+     Y TP
Sbjct: 30  ITYISSPTMVKATNASEFRAIVQELTGKDSKVEDPFDAYSMISN-EEASQVP---HYGTP 85

Query: 89  SLKI-------DSESAYTSMEDNLFWKDFSDSFSEFQSHC 121
              +        + + +   +D  F  D S+   EF+S C
Sbjct: 86  QFNVAGVHDVFPNNTPFLQTKDGFFGGDVSEMSFEFRSPC 125


>B9H3N7_POPTR (tr|B9H3N7) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_759225 PE=4 SV=1
          Length = 131

 Score = 79.0 bits (193), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 11/93 (11%)

Query: 29  ITYISNPTMVRATNASEFRAIVQELTGKDSKILDSWDIPCTTSILEEATQLVTDHRYETP 88
           ITYIS+PTMV+ATNASEFRAIVQELTGKDSK+ D +D     S  EEA+Q+     Y TP
Sbjct: 30  ITYISSPTMVKATNASEFRAIVQELTGKDSKVEDPFDAYSMISN-EEASQVP---HYGTP 85

Query: 89  SLKIDSESAYTSMEDNLFWKDFSDSFSEFQSHC 121
              + +       +D  F  D S+   EF+S C
Sbjct: 86  QFNVQT-------KDGFFGGDVSEISFEFRSPC 111


>B9N9R4_POPTR (tr|B9N9R4) Predicted protein OS=Populus trichocarpa
           GN=POPTRDRAFT_786936 PE=4 SV=1
          Length = 166

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 11/100 (11%)

Query: 29  ITYISNPTMVRATNASEFRAIVQELTGKDSKILDSWDIPCTTSILEEATQLVTDHRYETP 88
           ITYIS+PTMV+ATNASEFRAIVQELTGKDSK+ D +D     S  EEA Q+     Y TP
Sbjct: 30  ITYISSPTMVKATNASEFRAIVQELTGKDSKVEDPFDAYSMISN-EEANQVP---HYGTP 85

Query: 89  SLKI-------DSESAYTSMEDNLFWKDFSDSFSEFQSHC 121
              +        + + +   +D  F  D  +   EF+S C
Sbjct: 86  QFNVAGVHDVFPNNTPFLQTKDGFFGGDVLEMSFEFRSPC 125


>B9P9D9_POPTR (tr|B9P9D9) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_794029 PE=4 SV=1
          Length = 105

 Score = 69.3 bits (168), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 4/64 (6%)

Query: 29 ITYISNPTMVRATNASEFRAIVQELTGKDSKILDSWDIPCTTSILEEATQLVTDHRYETP 88
          ITYIS+PTMV+ATNASEFRAIVQELTGKDSK+ D +D     S  EEA+Q+     Y TP
Sbjct: 30 ITYISSPTMVKATNASEFRAIVQELTGKDSKVEDPFDAYSMIS-NEEASQVP---HYGTP 85

Query: 89 SLKI 92
             +
Sbjct: 86 QFNV 89


>B9MUD7_POPTR (tr|B9MUD7) Predicted protein OS=Populus trichocarpa
          GN=POPTRDRAFT_796568 PE=4 SV=1
          Length = 105

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/64 (57%), Positives = 44/64 (68%), Gaps = 4/64 (6%)

Query: 29 ITYISNPTMVRATNASEFRAIVQELTGKDSKILDSWDIPCTTSILEEATQLVTDHRYETP 88
          ITYIS+P MV+ATNASEFR IVQELTGKDSK+ D +D     S  EEA+Q+     Y TP
Sbjct: 30 ITYISSPMMVKATNASEFRVIVQELTGKDSKVEDPFDAYSMIS-NEEASQV---PHYGTP 85

Query: 89 SLKI 92
             +
Sbjct: 86 QFNV 89